| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121639000
Identifier: 121639000
GI number: 121639000
Start: 3435937
End: 3437184
Strand: Direct
Name: 121639000
Synonym: BCG_3140
Alternate gene names: NA
Gene position: 3435937-3437184 (Clockwise)
Preceding gene: 121638999
Following gene: 121639001
Centisome position: 78.54
GC content: 66.43
Gene sequence:
>1248_bases ATGACCTCTTCTCATCTTATCGACACCGAGCAGCTTCTGGCTGACCAACTCGCACAGGCGAGCCCGGATCTGCTGCGCGG GCTGCTCTCGACGTTCATCGCCGCCTTGATGGGGGCTGAAGCCGACGCCCTGTGCGGGGCGGGCTACCGCGAACGCAGCG ATGAGCGGTCCAATCAGCGCAACGGCTACCGCCACCGTGATTTCGACACCCGTGCCGCAACCATCGACGTCGCGATCCCC AAGCTGCGCCAGGGCAGCTATTTCCCGGACTGGCTGCTGCAGCGCCGCAAGCGAGCTGAACGCGCACTGACCAGCGTGGT GGCGACCTGCTACCTGCTGGGAGTATCCACTCGCCGGATGGAGCGCCTGGTCGAAACACTTGGTGTGACAAAGCTTTCCA AGTCGCAAGTGTCGATCATGGCCAAAGAGCTCGACGAAGCCGTAGAGGCGTTTCGGACCCGCCCGCTCGATGCCGGCCCG TATACCTTCCTCGCCGCCGACGCCCTGGTGCTCAAGGTGCGCGAGGCAGGCCGCGTCGTCGGAGTGCACACCTTGATCGC CACCGGCGTCAACGCCGAGGGCTACCGAGAGATCCTGGGCATCCAGGTCACCTCCGCCGAGGACGGGGCCGGCTGGCTGG CGTTCTTCCGCGACCTGGTCGCCCGCGGCCTGTCCGGGGTCGCGCTGGTCACCAGCGACGCCCACGCCGGCCTGGTGGCC GCGATCGGCGCCACCCTGCCCGCAGCGGCCTGGCAGCGCTGCAGAACCCACTACGCAGCCAATCTGATGGCAGCCACCCC GAAGCCCTCCTGGCCGTGGGTGCGCACCCTGCTGCACTCCATCTACGACCAGCCCGACGCCGAATCAGTTGTTGCCCAAT ATGATCGGGTACTCGACGCTCTGACCGACAAACTCCCCGCGGTGGCCGAGCACCTCGACACCGCCCGCACCGACCTGCTG GCGTTCACCGCCTTCCCCAAGCAGATCTGGCGCCAAATCTGGTCCAACAACCCCCAGGAACGCCTCAACCGAGAGGTACG ACGCCGAACCGACGTCGTGGGCATCTTCCCCGACCGCGCCTCGATCATCCGCCTCGTCGGAGCCGTCCTCGCCGAACAAC ACGACGAATGGATCGAAGGACGGCGCTACCTGGGCCTCGAGGTCCTCACCCGAGCCCGAGCAGCACTGACCAGCACCGAA GAACCCGCCAAGCAGCAAACCACCAACACCCCAGCACTGACCACCTAG
Upstream 100 bases:
>100_bases GGGCAGGTAAGGCCGGTGGGCGTGTCGTAGCCCAGTAGTGGGCGGTCATCGCGTGATCCTTCGAAACGACCAGCAAAAGT CAATCGAAGGAAATGACGCA
Downstream 100 bases:
>100_bases ACTGCCACCCGAAGGATCACGCGAGGAACCTTCACTCGTACACCACGTCCCTGGCCTTGGCCAGGAGGAGAGCAATCATG ACTGAAGCCTTGATCCCGGC
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQRNGYRHRDFDTRAATIDVAIP KLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSIMAKELDEAVEAFRTRPLDAGP YTFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDLVARGLSGVALVTSDAHAGLVA AIGATLPAAAWQRCRTHYAANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLDALTDKLPAVAEHLDTARTDLL AFTAFPKQIWRQIWSNNPQERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDEWIEGRRYLGLEVLTRARAALTSTE EPAKQQTTNTPALTT
Sequences:
>Translated_415_residues MTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQRNGYRHRDFDTRAATIDVAIP KLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSIMAKELDEAVEAFRTRPLDAGP YTFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDLVARGLSGVALVTSDAHAGLVA AIGATLPAAAWQRCRTHYAANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLDALTDKLPAVAEHLDTARTDLL AFTAFPKQIWRQIWSNNPQERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDEWIEGRRYLGLEVLTRARAALTSTE EPAKQQTTNTPALTT >Mature_414_residues TSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQRNGYRHRDFDTRAATIDVAIPK LRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSIMAKELDEAVEAFRTRPLDAGPY TFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDLVARGLSGVALVTSDAHAGLVAA IGATLPAAAWQRCRTHYAANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLDALTDKLPAVAEHLDTARTDLLA FTAFPKQIWRQIWSNNPQERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDEWIEGRRYLGLEVLTRARAALTSTEE PAKQQTTNTPALTT
Specific function: Required for the transposition of the insertion element
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TRA1_MYCBO (P60231)
Other databases:
- EMBL: X61270 - EMBL: BX248337 - EMBL: BX248338 - EMBL: BX248342 - EMBL: BX248344 - EMBL: BX248344 - PIR: A54550 - RefSeq: NP_854731.1 - RefSeq: NP_854885.1 - RefSeq: NP_856185.1 - RefSeq: NP_856694.1 - RefSeq: NP_856787.1 - EnsemblBacteria: EBMYCT00000014694 - EnsemblBacteria: EBMYCT00000015671 - EnsemblBacteria: EBMYCT00000016980 - EnsemblBacteria: EBMYCT00000017246 - EnsemblBacteria: EBMYCT00000017789 - GeneID: 1090506 - GeneID: 1090871 - GeneID: 1091988 - GeneID: 1093497 - GeneID: 1093498 - GenomeReviews: BX248333_GR - GenomeReviews: BX248333_GR - GenomeReviews: BX248333_GR - GenomeReviews: BX248333_GR - GenomeReviews: BX248333_GR - KEGG: mbo:Mb1076 - KEGG: mbo:Mb1231c - KEGG: mbo:Mb2540c - KEGG: mbo:Mb3049c - KEGG: mbo:Mb3142 - GeneTree: EBGT00050000014775 - HOGENOM: HBG654013 - OMA: NADGYRE - ProtClustDB: CLSK790916 - BioCyc: MBOV233413:MB1076-MONOMER - BioCyc: MBOV233413:MB1231C-MONOMER - BioCyc: MBOV233413:MB2540C-MONOMER - BioCyc: MBOV233413:MB3049C-MONOMER - BioCyc: MBOV233413:MB3142-MONOMER - InterPro: IPR001207
Pfam domain/function: PF00872 Transposase_mut
EC number: NA
Molecular weight: Translated: 45811; Mature: 45679
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: PS01007 TRANSPOSASE_MUTATOR; PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQR CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHCCHHHHHHC NGYRHRDFDTRAATIDVAIPKLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRM CCCCCCCCCCHHEEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ERLVETLGVTKLSKSQVSIMAKELDEAVEAFRTRPLDAGPYTFLAADALVLKVREAGRVV HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCH GVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDLVARGLSGVALVTSDAHAGLVA HHHHHHHHCCCCHHHHHHHCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHH AIGATLPAAAWQRCRTHYAANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLDA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LTDKLPAVAEHLDTARTDLLAFTAFPKQIWRQIWSNNPQERLNREVRRRTDVVGIFPDRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCHH SIIRLVGAVLAEQHDEWIEGRRYLGLEVLTRARAALTSTEEPAKQQTTNTPALTT HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCC >Mature Secondary Structure TSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQR CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHCCHHHHHHC NGYRHRDFDTRAATIDVAIPKLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRM CCCCCCCCCCHHEEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ERLVETLGVTKLSKSQVSIMAKELDEAVEAFRTRPLDAGPYTFLAADALVLKVREAGRVV HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCH GVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDLVARGLSGVALVTSDAHAGLVA HHHHHHHHCCCCHHHHHHHCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHH AIGATLPAAAWQRCRTHYAANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLDA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LTDKLPAVAEHLDTARTDLLAFTAFPKQIWRQIWSNNPQERLNREVRRRTDVVGIFPDRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCHH SIIRLVGAVLAEQHDEWIEGRRYLGLEVLTRARAALTSTEEPAKQQTTNTPALTT HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1663885; 12788972