| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638976
Identifier: 121638976
GI number: 121638976
Start: 3413602
End: 3415293
Strand: Direct
Name: 121638976
Synonym: BCG_3116
Alternate gene names: NA
Gene position: 3413602-3415293 (Clockwise)
Preceding gene: 121638975
Following gene: 121638980
Centisome position: 78.03
GC content: 69.39
Gene sequence:
>1692_bases ATGCCGATCCCCTTTGCCGATGGGATGCTCAGCCGGCTGGGTCGCCGCGGGGCAGCGCTCGACCTGATCGAGGAGTTCGA GGACGAGTCCGGGGAGCCCCCCGCATCCCTGAGCCCCGCCGACCTGCTGGCCGCCGAACCGGCCCTGCTGCTGCAGAAGA TGGAGAACCGCCTCGTCCGGCACCACCTAGCCAATCCGGACGTGTTGAGCGGCGAACAGCTGCGCAAGCTGCGCTACATC CTCAATTTCGCCAGGCTGGCCGACTTCGAACCGGGGGCCGCGGGGCCGGGCGGAAGCCGCGGTCGCGGGGACATCTCGGT GGGCGGCCAAGTCGCGCCTTGGCGGTCCCGGGTCGTCGACGCGTTGTACGCACCGCTGCGCGAGGAGCCCGATCCGGTCA CGGCGCTGGAGGGCGCGAAAGACGTGCTGGCGACGCTGGTCGACGACCAGGACGATCAGCGTCGAGTGCTCATCGAGCGC CACGGCAGCGACTTCTCCGCGACGGAACTCGACGCCGAGGTCGGCTACAAGAAGCTGGTGACCGTCCTCGGCGGCGGCGG GGGCGCGGGCTTCGTCTACATCGGCGGCATGCAACGGCTGCTGGCGGCCGGCCAGGTGCCCGACTACATGATCGGCTCGT CGTTCGGGTCGATCATCGGCAGCCTGGTGGCCCGTGAACTGCCGGTGCCGATCGACGAGTACGCCGAGTGGGCCAAAACG GTGTCCTACCGCGCCATCCTGGGCCCGGAGCGGCGGCGCAGCCGCCACGGGTTGGCCGGAATGTTCACCCTGCGCTTCGA CCAGTTCGCCCATACCCTGCTCAGCCGTGCGGACGGCGAACGGATGCGCATGTCGGATCTGGCAATCCCGTTCGATGTCG TCGTCGCCGGTGTGCGCAGGCAGCCTTATGCGGCGCTGCCGTCCAGGTTCCGCCATCGCGAGCGGTCTACACTGACGTTG CGGTCGCTGCCGTTTCTGCCGATCGGTATCGGCCCGTGGGTGGCGGCACGCATGTGGCAAGTCGCGGCCTTCATCGACTT GCGGGTGGTCAAGCCGATCGTCATCAGCGCCGACGGCGCGACACGCGACGTCAACGTCGTTGACGCGGCGTCTTTCTCGT CGGCCATCCCCGGTGTGCTGCACCACGAAACCAGCGACCCGCGGATGCTGCCAATCCTCGACGAGTTGTGCGCCGACCAG GACGTCGCGGCGATGGTCGACGGCGGCGCGGCCAGCAACGTCCCGGTCGAATTGGCGTGGGAGCGGGTCCGCGACGGGCG GCTCGGCACCCGCAACGCGTGTTATCTGGCGTTCGACTGCTTCCATCCGCACTGGGACCCCCGACATCTGTGGCTGGTAC CGATCACCCAGGCGGTCCAGCTGCAGATGGTGCGCAACCTGCCCTACGCCGACCACCTCGTCCGATTCGAGCCGACGCTG TCGCCGGTGAACCTGGCGCCGTCCGCGGCGGCCATCGACCGGGCTTGCCGGTGGGGGCGCGACAGCGTCGAACCGGCGAT TGCGGTGACATCGGCGCTGCTGGAGCCGACGTGGTGGGAAGGCGACAGGCCCCCCGCCGCCGAACCCAAGGAACGCACAA AGTCGGCGGCCTCGTCGATGAGCGCCGTGATGGCCGCGATTCAGGCGCCGACGGGCCGGTTTCGGCGATGGCGAAGCCGC CACCTGACCTAG
Upstream 100 bases:
>100_bases CCGCGATCAACAAGGGAATCAGCCCGCTGGGTTGCTGGCCGGGAAGCTCAGCGCTACCCACCATCGCAGTGCCGGGACGG TAACCGCGAAGATTGACCCC
Downstream 100 bases:
>100_bases CGACGGCTACAGGGAACGCGACCTCGGCGGTCGAAAGCAAACCAGGTGCACAAGTGCAACAACAACGATTCCGATCACCA ACCCAGTCGCCGCGCACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Patatin-Like Phospholipase Family Protein
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MPIPFADGMLSRLGRRGAALDLIEEFEDESGEPPASLSPADLLAAEPALLLQKMENRLVRHHLANPDVLSGEQLRKLRYI LNFARLADFEPGAAGPGGSRGRGDISVGGQVAPWRSRVVDALYAPLREEPDPVTALEGAKDVLATLVDDQDDQRRVLIER HGSDFSATELDAEVGYKKLVTVLGGGGGAGFVYIGGMQRLLAAGQVPDYMIGSSFGSIIGSLVARELPVPIDEYAEWAKT VSYRAILGPERRRSRHGLAGMFTLRFDQFAHTLLSRADGERMRMSDLAIPFDVVVAGVRRQPYAALPSRFRHRERSTLTL RSLPFLPIGIGPWVAARMWQVAAFIDLRVVKPIVISADGATRDVNVVDAASFSSAIPGVLHHETSDPRMLPILDELCADQ DVAAMVDGGAASNVPVELAWERVRDGRLGTRNACYLAFDCFHPHWDPRHLWLVPITQAVQLQMVRNLPYADHLVRFEPTL SPVNLAPSAAAIDRACRWGRDSVEPAIAVTSALLEPTWWEGDRPPAAEPKERTKSAASSMSAVMAAIQAPTGRFRRWRSR HLT
Sequences:
>Translated_563_residues MPIPFADGMLSRLGRRGAALDLIEEFEDESGEPPASLSPADLLAAEPALLLQKMENRLVRHHLANPDVLSGEQLRKLRYI LNFARLADFEPGAAGPGGSRGRGDISVGGQVAPWRSRVVDALYAPLREEPDPVTALEGAKDVLATLVDDQDDQRRVLIER HGSDFSATELDAEVGYKKLVTVLGGGGGAGFVYIGGMQRLLAAGQVPDYMIGSSFGSIIGSLVARELPVPIDEYAEWAKT VSYRAILGPERRRSRHGLAGMFTLRFDQFAHTLLSRADGERMRMSDLAIPFDVVVAGVRRQPYAALPSRFRHRERSTLTL RSLPFLPIGIGPWVAARMWQVAAFIDLRVVKPIVISADGATRDVNVVDAASFSSAIPGVLHHETSDPRMLPILDELCADQ DVAAMVDGGAASNVPVELAWERVRDGRLGTRNACYLAFDCFHPHWDPRHLWLVPITQAVQLQMVRNLPYADHLVRFEPTL SPVNLAPSAAAIDRACRWGRDSVEPAIAVTSALLEPTWWEGDRPPAAEPKERTKSAASSMSAVMAAIQAPTGRFRRWRSR HLT >Mature_562_residues PIPFADGMLSRLGRRGAALDLIEEFEDESGEPPASLSPADLLAAEPALLLQKMENRLVRHHLANPDVLSGEQLRKLRYIL NFARLADFEPGAAGPGGSRGRGDISVGGQVAPWRSRVVDALYAPLREEPDPVTALEGAKDVLATLVDDQDDQRRVLIERH GSDFSATELDAEVGYKKLVTVLGGGGGAGFVYIGGMQRLLAAGQVPDYMIGSSFGSIIGSLVARELPVPIDEYAEWAKTV SYRAILGPERRRSRHGLAGMFTLRFDQFAHTLLSRADGERMRMSDLAIPFDVVVAGVRRQPYAALPSRFRHRERSTLTLR SLPFLPIGIGPWVAARMWQVAAFIDLRVVKPIVISADGATRDVNVVDAASFSSAIPGVLHHETSDPRMLPILDELCADQD VAAMVDGGAASNVPVELAWERVRDGRLGTRNACYLAFDCFHPHWDPRHLWLVPITQAVQLQMVRNLPYADHLVRFEPTLS PVNLAPSAAAIDRACRWGRDSVEPAIAVTSALLEPTWWEGDRPPAAEPKERTKSAASSMSAVMAAIQAPTGRFRRWRSRH LT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61646; Mature: 61515
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIPFADGMLSRLGRRGAALDLIEEFEDESGEPPASLSPADLLAAEPALLLQKMENRLVR CCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHH HHLANPDVLSGEQLRKLRYILNFARLADFEPGAAGPGGSRGRGDISVGGQVAPWRSRVVD HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH ALYAPLREEPDPVTALEGAKDVLATLVDDQDDQRRVLIERHGSDFSATELDAEVGYKKLV HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEHHEECCCCCCHHHHHHHHCHHHHH TVLGGGGGAGFVYIGGMQRLLAAGQVPDYMIGSSFGSIIGSLVARELPVPIDEYAEWAKT HHHCCCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VSYRAILGPERRRSRHGLAGMFTLRFDQFAHTLLSRADGERMRMSDLAIPFDVVVAGVRR HHHHHHCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCEEHHHCCCCHHHHHHHHCC QPYAALPSRFRHRERSTLTLRSLPFLPIGIGPWVAARMWQVAAFIDLRVVKPIVISADGA CCHHHHHHHHHHHHHCEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHCEEEEECCCC TRDVNVVDAASFSSAIPGVLHHETSDPRMLPILDELCADQDVAAMVDGGAASNVPVELAW CCCCEEEEHHHHHHHCCCHHCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHH ERVRDGRLGTRNACYLAFDCFHPHWDPRHLWLVPITQAVQLQMVRNLPYADHLVRFEPTL HHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHCCCCHHHEEEECCCC SPVNLAPSAAAIDRACRWGRDSVEPAIAVTSALLEPTWWEGDRPPAAEPKERTKSAASSM CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH SAVMAAIQAPTGRFRRWRSRHLT HHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure PIPFADGMLSRLGRRGAALDLIEEFEDESGEPPASLSPADLLAAEPALLLQKMENRLVR CCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHH HHLANPDVLSGEQLRKLRYILNFARLADFEPGAAGPGGSRGRGDISVGGQVAPWRSRVVD HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH ALYAPLREEPDPVTALEGAKDVLATLVDDQDDQRRVLIERHGSDFSATELDAEVGYKKLV HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEHHEECCCCCCHHHHHHHHCHHHHH TVLGGGGGAGFVYIGGMQRLLAAGQVPDYMIGSSFGSIIGSLVARELPVPIDEYAEWAKT HHHCCCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VSYRAILGPERRRSRHGLAGMFTLRFDQFAHTLLSRADGERMRMSDLAIPFDVVVAGVRR HHHHHHCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCEEHHHCCCCHHHHHHHHCC QPYAALPSRFRHRERSTLTLRSLPFLPIGIGPWVAARMWQVAAFIDLRVVKPIVISADGA CCHHHHHHHHHHHHHCEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHCEEEEECCCC TRDVNVVDAASFSSAIPGVLHHETSDPRMLPILDELCADQDVAAMVDGGAASNVPVELAW CCCCEEEEHHHHHHHCCCHHCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHH ERVRDGRLGTRNACYLAFDCFHPHWDPRHLWLVPITQAVQLQMVRNLPYADHLVRFEPTL HHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHCCCCHHHEEEECCCC SPVNLAPSAAAIDRACRWGRDSVEPAIAVTSALLEPTWWEGDRPPAAEPKERTKSAASSM CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH SAVMAAIQAPTGRFRRWRSRHLT HHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA