| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638456
Identifier: 121638456
GI number: 121638456
Start: 2859341
End: 2860408
Strand: Reverse
Name: 121638456
Synonym: BCG_2594c
Alternate gene names: NA
Gene position: 2860408-2859341 (Counterclockwise)
Preceding gene: 121638457
Following gene: 121638454
Centisome position: 65.39
GC content: 66.76
Gene sequence:
>1068_bases ATGAGCGCTTCGCTGCTAGTCAGGACGGCCTGCGGCGGCCGTGCGGTCGCCCAACGGTTGCGCACCGTGCTGTGGCCGAT CACCCAGACATCGGTCGTCGCCGGCCTCGCGTGGTATCTCACCCATGACGTGTTCAACCATCCGCAGGCGTTCTTCGCGC CGATTTCGGCTGTGGTGTGCATGTCGGCGACCAACGTGCTGTGCGCACGACGTGCCCAACAGATGATCGTCGGGGTGGCG CTGGGGATCGTGCTGGGTGCTGGCGTGCATGCTCTGCTTGGTTCCGGACCGATCGCCATGGGTGTGGTGGTGTTCATCGC GTTGTCGGTCGCGGTGCTGTGCGCACGCGGGTTGGTCGCGCAAGGCTTAATGTTCATCAACCAGGCCGCCGTCTCCGCGG TGCTGGTCTTGGTCTTCGCGTCCAACGGCAGTGTGGTTTTCGAACGCCTCTTCGACGCGCTGGTCGGTGGTGGGCTGGCT ATCGTGTTCAGCATTCTGCTCTTCCCGCCCGACCCGGTGGTCATGCTGTGCAGTGCGCGCGCCGACGTGTTGGCCGCTGT GCGCGACATCCTCGCCGAGCTGGTGAACACGGTGAGCGATCCCACCAGCGCCCCGCCCGACTGGCCGATGGCAGCCGCTG ATCGACTGCATCAGCAGCTGAACGGGCTCATCGAGGTGCGCGCCAACGCTGCCATGGTGGCGCGGCGAGCGCCCCGCCGA TGGGGGGTGCGCAGCACTGTCCGCGATCTCGATCAACAGGCCGTCTACCTGGCCCTGCTGGTCAGTTCGGTGTTGCATCT GGCTCGCACCATTGCCGGGCCTGGTGGCGATAAGCTGCCAACGCCCGTGCACGCCGTGCTCACCGACCTCGCCGCGGGAA CCGGCCTGGCCGACGCGGATCCGACGGCAGCGAACGAGCACGCGGCCGCCGCCCGCGCAACCGCGTCGACACTGCAATCG GCTGCTTGTGGCAGCAACGAAGTGGTGCGCGCCGATATCGTCCAAGCGTGTGTCACCGATCTACAACGGGTAATCGAACG CCCGGGCCCGTCGGGCATGTCAGCCTGA
Upstream 100 bases:
>100_bases TAAGGAGTCCGGAATAGATGCCCAGCCCAAGCGGGTCCAGCGGCATGACCAGATCTTTGCGGTTACGACGTCGCACCCGA GTGTGAATAAATAGGCGTTC
Downstream 100 bases:
>100_bases ATTGGCGAGAAACGCCTGCACCAGCTGCTTCGGCGCCTGCATCAGCCAGGCCTCGGTGATCAACTCCTCGAGGTCGCGAA CCTCGATCTCGGCCAGCCTG
Product: putative transmembrane alanine and valine and leucine rich protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSASLLVRTACGGRAVAQRLRTVLWPITQTSVVAGLAWYLTHDVFNHPQAFFAPISAVVCMSATNVLCARRAQQMIVGVA LGIVLGAGVHALLGSGPIAMGVVVFIALSVAVLCARGLVAQGLMFINQAAVSAVLVLVFASNGSVVFERLFDALVGGGLA IVFSILLFPPDPVVMLCSARADVLAAVRDILAELVNTVSDPTSAPPDWPMAAADRLHQQLNGLIEVRANAAMVARRAPRR WGVRSTVRDLDQQAVYLALLVSSVLHLARTIAGPGGDKLPTPVHAVLTDLAAGTGLADADPTAANEHAAAARATASTLQS AACGSNEVVRADIVQACVTDLQRVIERPGPSGMSA
Sequences:
>Translated_355_residues MSASLLVRTACGGRAVAQRLRTVLWPITQTSVVAGLAWYLTHDVFNHPQAFFAPISAVVCMSATNVLCARRAQQMIVGVA LGIVLGAGVHALLGSGPIAMGVVVFIALSVAVLCARGLVAQGLMFINQAAVSAVLVLVFASNGSVVFERLFDALVGGGLA IVFSILLFPPDPVVMLCSARADVLAAVRDILAELVNTVSDPTSAPPDWPMAAADRLHQQLNGLIEVRANAAMVARRAPRR WGVRSTVRDLDQQAVYLALLVSSVLHLARTIAGPGGDKLPTPVHAVLTDLAAGTGLADADPTAANEHAAAARATASTLQS AACGSNEVVRADIVQACVTDLQRVIERPGPSGMSA >Mature_354_residues SASLLVRTACGGRAVAQRLRTVLWPITQTSVVAGLAWYLTHDVFNHPQAFFAPISAVVCMSATNVLCARRAQQMIVGVAL GIVLGAGVHALLGSGPIAMGVVVFIALSVAVLCARGLVAQGLMFINQAAVSAVLVLVFASNGSVVFERLFDALVGGGLAI VFSILLFPPDPVVMLCSARADVLAAVRDILAELVNTVSDPTSAPPDWPMAAADRLHQQLNGLIEVRANAAMVARRAPRRW GVRSTVRDLDQQAVYLALLVSSVLHLARTIAGPGGDKLPTPVHAVLTDLAAGTGLADADPTAANEHAAAARATASTLQSA ACGSNEVVRADIVQACVTDLQRVIERPGPSGMSA
Specific function: Unknown
COG id: COG4129
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010343 [H]
Pfam domain/function: PF06081 DUF939 [H]
EC number: NA
Molecular weight: Translated: 36737; Mature: 36606
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASLLVRTACGGRAVAQRLRTVLWPITQTSVVAGLAWYLTHDVFNHPQAFFAPISAVVC CCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH MSATNVLCARRAQQMIVGVALGIVLGAGVHALLGSGPIAMGVVVFIALSVAVLCARGLVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH QGLMFINQAAVSAVLVLVFASNGSVVFERLFDALVGGGLAIVFSILLFPPDPVVMLCSAR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH ADVLAAVRDILAELVNTVSDPTSAPPDWPMAAADRLHQQLNGLIEVRANAAMVARRAPRR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH WGVRSTVRDLDQQAVYLALLVSSVLHLARTIAGPGGDKLPTPVHAVLTDLAAGTGLADAD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCC PTAANEHAAAARATASTLQSAACGSNEVVRADIVQACVTDLQRVIERPGPSGMSA CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SASLLVRTACGGRAVAQRLRTVLWPITQTSVVAGLAWYLTHDVFNHPQAFFAPISAVVC CCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH MSATNVLCARRAQQMIVGVALGIVLGAGVHALLGSGPIAMGVVVFIALSVAVLCARGLVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH QGLMFINQAAVSAVLVLVFASNGSVVFERLFDALVGGGLAIVFSILLFPPDPVVMLCSAR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHH ADVLAAVRDILAELVNTVSDPTSAPPDWPMAAADRLHQQLNGLIEVRANAAMVARRAPRR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH WGVRSTVRDLDQQAVYLALLVSSVLHLARTIAGPGGDKLPTPVHAVLTDLAAGTGLADAD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCC PTAANEHAAAARATASTLQSAACGSNEVVRADIVQACVTDLQRVIERPGPSGMSA CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]