| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is rbsK [H]
Identifier: 121638318
GI number: 121638318
Start: 2698400
End: 2699314
Strand: Direct
Name: rbsK [H]
Synonym: BCG_2455
Alternate gene names: 121638318
Gene position: 2698400-2699314 (Clockwise)
Preceding gene: 121638311
Following gene: 121638319
Centisome position: 61.68
GC content: 68.74
Gene sequence:
>915_bases ATGGCAAACGCCAGTGAGACTAACGTCGGCCCCATGGCGCCCCGGGTGTGCGTGGTAGGCAGCGTGAACATGGACCTGAC GTTCGTGGTGGACGCGCTTCCGCGCCCCGGCGAGACGGTGCTTGCGGCGTCGTTGACCCGAACGCCAGGCGGGAAGGGCG CCAACCAGGCGGTGGCCGCAGCGCGCGCAGGCGCGCAGGTACAGTTCTCCGGTGCATTCGGCGACGATCCAGCCGCCGCC CAGCTGCGGGCCCACCTGCGCGCCAACGCCGTTGGACTGGACAGGACCGTCACGGTGCCCGGACCGAGCGGGACGGCGAT TATCGTGGTCGATGCCAGCGCCGAGAACACCGTGCTGGTGGCGCCGGGTGCCAATGCACATCTGACTCCGGTACCCTCGG CCGTCGCCAACTGCGATGTACTGTTGACCCAGTTGGAGATTCCTGTTGCAACCGCGCTGGCAGCCGCGCGGGCAGCCCAG TCGGCCGATGCGGTTGTCATGGTCAACGCCTCCCCAGCCGGCCAGGATCGAAGCTCCTTGCAGGACTTGGCCGCTATCGC CGACGTGGTGATCGCCAACGAGCATGAGGCAAACGACTGGCCGTCGCCACCAACACATTTCGTGATCACCCTGGGTGTGC GCGGTGCCCGGTACGTCGGCGCGGACGGGGTGTTCGAGGTACCCGCCCCAACGGTAACGCCAGTGGATACCGCCGGCGCC GGCGACGTATTTGCCGGGGTCCTTGCTGCGAATTGGCCGCGCAACCCAGGTTCGCCGGCCGAGCGACTGCGCGCATTGCG GCGGGCCTGCGCTGCGGGTGTGCTGGCAACTTTGGTGTCCGGTGCCGGCGACTGCGCACCGGCCGCCGCCGCGATCGATG CGGCCCTGCGAGCCAACCGCCACAACGGTTCATGA
Upstream 100 bases:
>100_bases ATCCGCAAGCATGTTCGAATACTGGGACGCGCCACCGACAGGACACCCACTGATACCCTTGGGACAAAAGTGACACAAGT GATTTCAGCCAACAGCAAGC
Downstream 100 bases:
>100_bases CCACTGCTACGCACCGAAGGAGACCCGCTGATGCGAACGACCACCGCGGCCGACTTAGCGCTGGCACTCTTCGCGGTTTT CAGTGTGGTCGGATTCGGCT
Product: ribokinase rbsK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAA QLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQ SADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGA GDVFAGVLAANWPRNPGSPAERLRALRRACAAGVLATLVSGAGDCAPAAAAIDAALRANRHNGS
Sequences:
>Translated_304_residues MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAA QLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQ SADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGA GDVFAGVLAANWPRNPGSPAERLRALRRACAAGVLATLVSGAGDCAPAAAAIDAALRANRHNGS >Mature_303_residues ANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQ LRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQS ADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAG DVFAGVLAANWPRNPGSPAERLRALRRACAAGVLATLVSGAGDCAPAAAAIDAALRANRHNGS
Specific function: Ribose metabolism; first step. [C]
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Homo sapiens, GI11545855, Length=271, Percent_Identity=29.520295202952, Blast_Score=92, Evalue=5e-19, Organism=Escherichia coli, GI1790193, Length=259, Percent_Identity=35.1351351351351, Blast_Score=118, Evalue=6e-28, Organism=Escherichia coli, GI87082343, Length=253, Percent_Identity=30.4347826086957, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17532905, Length=268, Percent_Identity=31.7164179104478, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI20128807, Length=280, Percent_Identity=35, Blast_Score=107, Evalue=8e-24, Organism=Drosophila melanogaster, GI24583886, Length=287, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR011877 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.15 [H]
Molecular weight: Translated: 30280; Mature: 30149
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAA CCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHH ARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLV HHCCCEEEECCCCCCCHHHHHHHHHHHHCEECCCCEEECCCCCCCEEEEEECCCCCEEEE APGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSL ECCCCCCCCCCCHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHH QDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGA HHHHHHHHHHEECCCCCCCCCCCCCEEEEEEECCCCEEECCCCEEECCCCCCCCCCCCCC GDVFAGVLAANWPRNPGSPAERLRALRRACAAGVLATLVSGAGDCAPAAAAIDAALRANR CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC HNGS CCCC >Mature Secondary Structure ANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAA CCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHH ARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLV HHCCCEEEECCCCCCCHHHHHHHHHHHHCEECCCCEEECCCCCCCEEEEEECCCCCEEEE APGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSL ECCCCCCCCCCCHHHHHHHEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHH QDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGA HHHHHHHHHHEECCCCCCCCCCCCCEEEEEEECCCCEEECCCCEEECCCCCCCCCCCCCC GDVFAGVLAANWPRNPGSPAERLRALRRACAAGVLATLVSGAGDCAPAAAAIDAALRANR CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC HNGS CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7921236; 9353933; 9384377 [H]