| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121637163
Identifier: 121637163
GI number: 121637163
Start: 1406698
End: 1407225
Strand: Direct
Name: 121637163
Synonym: BCG_1294
Alternate gene names: NA
Gene position: 1406698-1407225 (Clockwise)
Preceding gene: 121637157
Following gene: 121637164
Centisome position: 32.16
GC content: 63.07
Gene sequence:
>528_bases ATGACTAGCCCATTCCAGCCCAGACAGGTTCCCGGTTCAACACCCGCCGCCGCAGGTGCGGGTCGACGTGGTGTGCCCGC ATTGCCCACCCCGCCGAAAGGTTGGCCAGTCGGGTCGTATCCCACCTATGCCGAGGCGCAACGTGCGGTCGACTATCTAT CCGAGCAGCAGTTCCCGGTCCAGCAGGTGACCATCGTTGGCGTGGACCTCATGCAGGTTGAACGGGTCACAGGCCGGCTG ACCTGGCCCAAAGTGCTTGGTGGCGGCGTGCTGAGTGGCGCCTGGCTGGGCCTGTTCATCGGGTTGGTGCTCGGGTTCTT CAGTCCCAATCCATGGTCCGCGCTGGTTACCGGCCTGGTGGCCGGGGTGTTCTTCGGGCTGATCACCTCTGCAGTGCCGT ACGCAATGGCTCGCGGCACAAGGGATTTCAGCTCGACCATGCAACTGGTTGCCGGTCGCTACGACGTACTTTGTGATCCG CAAAATGCGGAAAAGGCACGGGATCTGCTGGCGCGTCTGGCGATCTGA
Upstream 100 bases:
>100_bases TCGCTCGCGGGTTGAGTGGATAGTGTGCCGGGAGTAGCTGGACCTGACTGGACATGAAACGATGGCGCTGAAAAAGGGGG GCGGAGGAGAATGAGAACCG
Downstream 100 bases:
>100_bases AGCCCGGACGAGAGGCAAATGTGGTCATGAGTCGCGGGCGGATACCGAGGCTGGGCGCTGCCGTACTGGTGGCGTTGACG ACCGCGGCGGCGGCGTGCGG
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTSPFQPRQVPGSTPAAAGAGRRGVPALPTPPKGWPVGSYPTYAEAQRAVDYLSEQQFPVQQVTIVGVDLMQVERVTGRL TWPKVLGGGVLSGAWLGLFIGLVLGFFSPNPWSALVTGLVAGVFFGLITSAVPYAMARGTRDFSSTMQLVAGRYDVLCDP QNAEKARDLLARLAI
Sequences:
>Translated_175_residues MTSPFQPRQVPGSTPAAAGAGRRGVPALPTPPKGWPVGSYPTYAEAQRAVDYLSEQQFPVQQVTIVGVDLMQVERVTGRL TWPKVLGGGVLSGAWLGLFIGLVLGFFSPNPWSALVTGLVAGVFFGLITSAVPYAMARGTRDFSSTMQLVAGRYDVLCDP QNAEKARDLLARLAI >Mature_174_residues TSPFQPRQVPGSTPAAAGAGRRGVPALPTPPKGWPVGSYPTYAEAQRAVDYLSEQQFPVQQVTIVGVDLMQVERVTGRLT WPKVLGGGVLSGAWLGLFIGLVLGFFSPNPWSALVTGLVAGVFFGLITSAVPYAMARGTRDFSSTMQLVAGRYDVLCDPQ NAEKARDLLARLAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18605; Mature: 18474
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPFQPRQVPGSTPAAAGAGRRGVPALPTPPKGWPVGSYPTYAEAQRAVDYLSEQQFPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCH QQVTIVGVDLMQVERVTGRLTWPKVLGGGVLSGAWLGLFIGLVLGFFSPNPWSALVTGLV HHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AGVFFGLITSAVPYAMARGTRDFSSTMQLVAGRYDVLCDPQNAEKARDLLARLAI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure TSPFQPRQVPGSTPAAAGAGRRGVPALPTPPKGWPVGSYPTYAEAQRAVDYLSEQQFPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCH QQVTIVGVDLMQVERVTGRLTWPKVLGGGVLSGAWLGLFIGLVLGFFSPNPWSALVTGLV HHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AGVFFGLITSAVPYAMARGTRDFSSTMQLVAGRYDVLCDPQNAEKARDLLARLAI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA