| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is gltA1 [H]
Identifier: 121637063
GI number: 121637063
Start: 1287547
End: 1288728
Strand: Direct
Name: gltA1 [H]
Synonym: BCG_1192
Alternate gene names: 121637063
Gene position: 1287547-1288728 (Clockwise)
Preceding gene: 121637062
Following gene: 121637064
Centisome position: 29.43
GC content: 66.16
Gene sequence:
>1182_bases ATGACCGGGCCGCTCGCGGCGGCCAGGTCCGTCGCTGCCACGAAATCGATGACCGCGCCCACCGTTGATGAGCGGCCCGA CATCAAAAAGGGCCTCGCCGGCGTGGTGGTGGACACCACCGCCATCTCCAAGGTGGTGCCGCAGACCAATTCGTTGACCT ACCGGGGATATCCGGTCCAGGATCTGGCAGCCCGCTGCAGTTTCGAGCAGGTCGCCTTCCTGCTGTGGCGTGGTGAGTTG CCCACCGATGCCGAGCTGGCGTTGTTCAGCCAGCGCGAACGAGCCAGCCGTCGGGTGGACCGCTCGATGCTGTCATTGCT GGCCAAGCTGCCGGACAACTGCCACCCGATGGACGTGGTGCGCACCGCGATCAGCTATCTCGGTGCCGAGGACCCGGACG AGGACGACGCCGCGGCCAACCGGGCCAAGGCGATGCGCATGATGGCGGTGTTGCCGACGATCGTGGCGATCGACATGCGG CGCCGACGCGGGTTGCCCCCGATCGCACCGCACAGCGGGCTCGGTTATGCGCAGAACTTCCTGCACATGTGCTTCGGGGA GGTACCCGAAACCGCCGTCGTGTCGGCGTTCGAGCAGTCGATGATCCTCTACGCCGAGCACGGATTCAACGCGTCGACGT TCGCCGCCCGGGTGGTGACCTCGACCCAATCCGACATCTACAGCGCGGTGACCGGCGCGATCGGCGCCCTCAAGGGGCGG CTACACGGCGGCGCCAACGAAGCCGTCATGCACGACATGATCGAGATCGGCGATCCGGCCAACGCGCGGGAGTGGTTGCG CGCCAAGCTCGCCCGCAAGGAAAAGATCATGGGCTTCGGGCATCGGGTGTACCGGCACGGCGACTCCCGGGTGCCGACCA TGAAACGGGCGCTGGAGCGCGTGGGGACCGTTCGCGACGGCCAGCGATGGCTGGACATCTACCAGGTGTTAGCGGCCGAG ATGGCGTCGGCCACCGGGATCTTGCCCAACCTCGATTTTCCGACCGGGCCCGCGTACTACCTGATGGGATTCGACATCGC CAGCTTCACCCCGATCTTCGTGATGAGTAGGATCACCGGCTGGACCGCACACATCATGGAACAGGCCACGGCCAACGCGC TGATCCGGCCGCTGAGCGCATATTGCGGGCACGAGCAGCGGGTGTTACCGGGCACCTTCTAG
Upstream 100 bases:
>100_bases GTCTCGCCGATCTCGAGAGCGGTGCCGTGGGTGGGCTGAACGTGTTGGTCGATCCGCGGGTGCTGGACAAAGCGCCGGTG ATTCCACCAGGAATCTTTCG
Downstream 100 bases:
>100_bases TCTTATGGGCCATGGGATTTCTCCAGCCCCGACTTCCCGACATCGACCTGGCCGAATGGAGCCAGGGCTCCCGCAGCCAG AAGATCCGGCCGATGGCCCA
Product: citrate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MTGPLAAARSVAATKSMTAPTVDERPDIKKGLAGVVVDTTAISKVVPQTNSLTYRGYPVQDLAARCSFEQVAFLLWRGEL PTDAELALFSQRERASRRVDRSMLSLLAKLPDNCHPMDVVRTAISYLGAEDPDEDDAAANRAKAMRMMAVLPTIVAIDMR RRRGLPPIAPHSGLGYAQNFLHMCFGEVPETAVVSAFEQSMILYAEHGFNASTFAARVVTSTQSDIYSAVTGAIGALKGR LHGGANEAVMHDMIEIGDPANAREWLRAKLARKEKIMGFGHRVYRHGDSRVPTMKRALERVGTVRDGQRWLDIYQVLAAE MASATGILPNLDFPTGPAYYLMGFDIASFTPIFVMSRITGWTAHIMEQATANALIRPLSAYCGHEQRVLPGTF
Sequences:
>Translated_393_residues MTGPLAAARSVAATKSMTAPTVDERPDIKKGLAGVVVDTTAISKVVPQTNSLTYRGYPVQDLAARCSFEQVAFLLWRGEL PTDAELALFSQRERASRRVDRSMLSLLAKLPDNCHPMDVVRTAISYLGAEDPDEDDAAANRAKAMRMMAVLPTIVAIDMR RRRGLPPIAPHSGLGYAQNFLHMCFGEVPETAVVSAFEQSMILYAEHGFNASTFAARVVTSTQSDIYSAVTGAIGALKGR LHGGANEAVMHDMIEIGDPANAREWLRAKLARKEKIMGFGHRVYRHGDSRVPTMKRALERVGTVRDGQRWLDIYQVLAAE MASATGILPNLDFPTGPAYYLMGFDIASFTPIFVMSRITGWTAHIMEQATANALIRPLSAYCGHEQRVLPGTF >Mature_392_residues TGPLAAARSVAATKSMTAPTVDERPDIKKGLAGVVVDTTAISKVVPQTNSLTYRGYPVQDLAARCSFEQVAFLLWRGELP TDAELALFSQRERASRRVDRSMLSLLAKLPDNCHPMDVVRTAISYLGAEDPDEDDAAANRAKAMRMMAVLPTIVAIDMRR RRGLPPIAPHSGLGYAQNFLHMCFGEVPETAVVSAFEQSMILYAEHGFNASTFAARVVTSTQSDIYSAVTGAIGALKGRL HGGANEAVMHDMIEIGDPANAREWLRAKLARKEKIMGFGHRVYRHGDSRVPTMKRALERVGTVRDGQRWLDIYQVLAAEM ASATGILPNLDFPTGPAYYLMGFDIASFTPIFVMSRITGWTAHIMEQATANALIRPLSAYCGHEQRVLPGTF
Specific function: Catalyzes The Synthesis Of 2-Methylcitrate From Propionyl-CoA And Oxaloacetate. Also Catalyzes The Condensation Of Oxaloacetate With Acetyl-CoA But With A Lower Specificity. [C]
COG id: COG0372
COG function: function code C; Citrate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the citrate synthase family [H]
Homologues:
Organism=Homo sapiens, GI38327625, Length=396, Percent_Identity=25, Blast_Score=76, Evalue=4e-14, Organism=Escherichia coli, GI1786527, Length=366, Percent_Identity=38.2513661202186, Blast_Score=239, Evalue=2e-64, Organism=Escherichia coli, GI1786939, Length=353, Percent_Identity=30.3116147308782, Blast_Score=152, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17555174, Length=371, Percent_Identity=25.6064690026954, Blast_Score=86, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6319850, Length=338, Percent_Identity=23.6686390532544, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640124, Length=409, Percent_Identity=24.9388753056235, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24640126, Length=409, Percent_Identity=24.9388753056235, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011278 - InterPro: IPR016142 - InterPro: IPR016143 - InterPro: IPR002020 - InterPro: IPR016141 - InterPro: IPR019810 [H]
Pfam domain/function: PF00285 Citrate_synt [H]
EC number: =2.3.3.1 [H]
Molecular weight: Translated: 42970; Mature: 42839
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS00480 CITRATE_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPLAAARSVAATKSMTAPTVDERPDIKKGLAGVVVDTTAISKVVPQTNSLTYRGYPVQ CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHEEHHHHHHHHCCCCCCEEECCCCHH DLAARCSFEQVAFLLWRGELPTDAELALFSQRERASRRVDRSMLSLLAKLPDNCHPMDVV HHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RTAISYLGAEDPDEDDAAANRAKAMRMMAVLPTIVAIDMRRRRGLPPIAPHSGLGYAQNF HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH LHMCFGEVPETAVVSAFEQSMILYAEHGFNASTFAARVVTSTQSDIYSAVTGAIGALKGR HHHHHCCCCHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHGGANEAVMHDMIEIGDPANAREWLRAKLARKEKIMGFGHRVYRHGDSRVPTMKRALER HCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VGTVRDGQRWLDIYQVLAAEMASATGILPNLDFPTGPAYYLMGFDIASFTPIFVMSRITG HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH WTAHIMEQATANALIRPLSAYCGHEQRVLPGTF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TGPLAAARSVAATKSMTAPTVDERPDIKKGLAGVVVDTTAISKVVPQTNSLTYRGYPVQ CCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHEEHHHHHHHHCCCCCCEEECCCCHH DLAARCSFEQVAFLLWRGELPTDAELALFSQRERASRRVDRSMLSLLAKLPDNCHPMDVV HHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RTAISYLGAEDPDEDDAAANRAKAMRMMAVLPTIVAIDMRRRRGLPPIAPHSGLGYAQNF HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH LHMCFGEVPETAVVSAFEQSMILYAEHGFNASTFAARVVTSTQSDIYSAVTGAIGALKGR HHHHHCCCCHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHGGANEAVMHDMIEIGDPANAREWLRAKLARKEKIMGFGHRVYRHGDSRVPTMKRALER HCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VGTVRDGQRWLDIYQVLAAEMASATGILPNLDFPTGPAYYLMGFDIASFTPIFVMSRITG HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH WTAHIMEQATANALIRPLSAYCGHEQRVLPGTF HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1883331 [H]