| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121636948
Identifier: 121636948
GI number: 121636948
Start: 1168800
End: 1169393
Strand: Direct
Name: 121636948
Synonym: BCG_1076
Alternate gene names: NA
Gene position: 1168800-1169393 (Clockwise)
Preceding gene: 121636942
Following gene: 121636949
Centisome position: 26.72
GC content: 64.98
Gene sequence:
>594_bases ATGACGGGGACCGAGCGCCGTCACCAGCTCATCGGCATCGCGCGATCGCTGTTTGCCGAACGCGGTTACGACGGGACGTC GATCGAAGAGATCGCGCAGCGCGCCAACGTATCCAAGCCGGTCGTCTACGAACATTTCGGTGGCAAGGAGGGCCTGTACG CGGTGGTGGTCGATCGGGAGATGTCGGCGCTGCTGGACGGAATCACCTCGTCGCTGACCAACAACCGATCCCGGGTGCGG GTGGAGCGGGTCGCGCTGGCGTTGCTGACCTACGTCGAGGAACGCACCGACGGCTTCCGCATCATGATTCGCGACTCGCC GGCCTCGATCAGCTCGGGCACCTATTCCAGCCTGCTCAACGACGCCGTCAGCCAGGTCAGCTCGATTCTGGCTGGAGACT TCGCCCGGCGCGGCCTGGACCCGGACCTGGCACCGCTGTATGCGCAAGCATTGGTGGGTTCGGTGTCGATGACGGCGCAA TGGTGGCTCGATGCGCGCGAACCGAAGAAGGAAGTGGTGGCCGCGCACCTGGTCAACCTGGTCTGGAATGGCCTGACCCA CCTGGAGGCCGATCCGCGGCTACAGGACGAGTAG
Upstream 100 bases:
>100_bases CACCGGCCCCACGCAAACCGATACCCTTGTTGATGTGGCCGGACCGGATAAAGGGCCGGATAAGGCGCCGGAAAACCCGA CGCGGGTGACGCGCGCCAGG
Downstream 100 bases:
>100_bases CGGGCGGGGAAGCCGGGCCCAATGTTGACTAACCTCGGCGCCCTAGAATGGCCGCATCATGACCGCACCGGGGCCTGCCT GCTCAGATACCCCGATCGCG
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR; TetR-Type Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR-Family; Transcriptional Regulator TetR Family Protein; Transcription Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator Tetr Family
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTGTERRHQLIGIARSLFAERGYDGTSIEEIAQRANVSKPVVYEHFGGKEGLYAVVVDREMSALLDGITSSLTNNRSRVR VERVALALLTYVEERTDGFRIMIRDSPASISSGTYSSLLNDAVSQVSSILAGDFARRGLDPDLAPLYAQALVGSVSMTAQ WWLDAREPKKEVVAAHLVNLVWNGLTHLEADPRLQDE
Sequences:
>Translated_197_residues MTGTERRHQLIGIARSLFAERGYDGTSIEEIAQRANVSKPVVYEHFGGKEGLYAVVVDREMSALLDGITSSLTNNRSRVR VERVALALLTYVEERTDGFRIMIRDSPASISSGTYSSLLNDAVSQVSSILAGDFARRGLDPDLAPLYAQALVGSVSMTAQ WWLDAREPKKEVVAAHLVNLVWNGLTHLEADPRLQDE >Mature_196_residues TGTERRHQLIGIARSLFAERGYDGTSIEEIAQRANVSKPVVYEHFGGKEGLYAVVVDREMSALLDGITSSLTNNRSRVRV ERVALALLTYVEERTDGFRIMIRDSPASISSGTYSSLLNDAVSQVSSILAGDFARRGLDPDLAPLYAQALVGSVSMTAQW WLDAREPKKEVVAAHLVNLVWNGLTHLEADPRLQDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21702; Mature: 21571
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTERRHQLIGIARSLFAERGYDGTSIEEIAQRANVSKPVVYEHFGGKEGLYAVVVDRE CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCEEEEEECHH MSALLDGITSSLTNNRSRVRVERVALALLTYVEERTDGFRIMIRDSPASISSGTYSSLLN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHH DAVSQVSSILAGDFARRGLDPDLAPLYAQALVGSVSMTAQWWLDAREPKKEVVAAHLVNL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VWNGLTHLEADPRLQDE HHHHHHHCCCCCCCCCC >Mature Secondary Structure TGTERRHQLIGIARSLFAERGYDGTSIEEIAQRANVSKPVVYEHFGGKEGLYAVVVDRE CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCEEEEEECHH MSALLDGITSSLTNNRSRVRVERVALALLTYVEERTDGFRIMIRDSPASISSGTYSSLLN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHH DAVSQVSSILAGDFARRGLDPDLAPLYAQALVGSVSMTAQWWLDAREPKKEVVAAHLVNL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VWNGLTHLEADPRLQDE HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA