| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is pgi [H]
Identifier: 121636871
GI number: 121636871
Start: 1085501
End: 1087162
Strand: Reverse
Name: pgi [H]
Synonym: BCG_1000c
Alternate gene names: 121636871
Gene position: 1087162-1085501 (Counterclockwise)
Preceding gene: 121636872
Following gene: 121636868
Centisome position: 24.85
GC content: 64.32
Gene sequence:
>1662_bases ATGACCTCCGCGCCAATCCCCGACATCACCGCTACCCCGGCATGGGACGCCCTGCGCAGACATCACGATCAGATCGGAAA CACCCATCTTCGCCAGTTCTTCGCCGACGATCCGGGTCGCGGCCGGGAGCTCACCGTCAGCGTCGGCGATCTCTACATCG ACTACAGCAAACACCGCGTCACCCGCGAGACGCTGGCGCTGCTGATCGATCTGGCCCGGACGGCCCACCTCGAAGAGCGT CGCGACCAGATGTTCGCCGGTGTGCATATCAACACCTCTGAGGATCGAGCGGTGTTGCACACCGCGCTGCGGCTGCCCCG AGACGCCGAACTCGTCGTCGACGGCCAAGACGTCGTCACCGACGTACATGCCGTGCTCGACGCGATGGGCGCCTTCACCG ACCGCCTGCGCAGCGGCGAGTGGACCGGAGCAACTGGAAAGCGGATCAGCACCGTCGTCAACATCGGCATCGGTGGTTCG GATTTGGGTCCGGTGATGGTGTACCAAGCGTTGCGCCACTATGCCGACGCGGGCATTTCCGCGCGCTTCGTGTCCAACGT CGATCCCGCCGACCTGATCGCCACGCTCGCCGATCTAGACCCCGCCACAACGCTTTTCATCGTCGCGTCGAAGACGTTCT CGACGCTGGAGACATTGACCAATGCGACCGCGGCGCGTCGCTGGCTGACCGATGCGCTGGGCGACGCCGCGGTGTCGCGG CATTTTGTCGCGGTGTCCACCAACAAGCGCCTGGTCGACGACTTCGGCATCAACACCGACAACATGTTCGGTTTTTGGGA TTGGGTCGGCGGGCGTTATTCGGTGGATTCGGCGATCGGGCTGTCGTTGATGACGGTGATCGGCCGCGACGCCTTCGCCG ATTTCTTGGCCGGATTCCACATCATCGACCGCCATTTCGCGACCGCTCCGCTGGAATCCAACGCGCCGGTGCTGCTTGGC CTGATCGGACTGTGGTACTCCAATTTCTTCGGTGCGCAATCACGCACCGTGCTGCCGTATTCCAATGACTTGTCGCGTTT TCCGGCCTACCTTCAGCAGTTGACCATGGAATCCAACGGCAAGTCCACGCGCGCCGACGGCAGCCCGGTCAGCGCCGACA CCGGTGAAATCTTTTGGGGTGAACCGGGAACCAACGGCCAGCACGCCTTCTACCAGTTGCTGCACCAGGGCACCCGGCTG GTGCCAGCCGATTTCATCGGCTTTGCTCAACCCCTCGACGACCTGCCGACCGCCGAGGGCACCGGCAGCATGCATGATCT GCTGATGAGCAACTTCTTCGCCCAAACCCAGGTGCTGGCGTTCGGCAAGACCGCCGAGGAGATCGCCGCCGACGGCACCC CCGCCCACGTGGTAGCGCATAAGGTGATGCCCGGCAACCGGCCGTCCACCTCAATTCTGGCCAGTCGGCTCACGCCGTCG GTGCTGGGGCAGTTGATCGCGCTCTACGAGCATCAGGTGTTCACCGAGGGTGTGGTGTGGGGTATCGACTCGTTCGACCA GTGGGGGGTGGAGCTGGGCAAGACGCAGGCCAAGGCGCTGCTTCCGGTAATCACCGGCGCCGGTTCACCGCCACCGCAGT CGGACAGCTCGACCGACGGGCTGGTGCGCCGCTACCGCACCGAACGTGGCCGCGCGGGCTAG
Upstream 100 bases:
>100_bases ATACCGCGACAAACGGCGAGTGCCGCCGAGCACGATAACTAAAGGCTCGGCGAAGACAGCGGCTCTGATCGACGCCACTC CACGGCATTAGGGTCGAACC
Downstream 100 bases:
>100_bases GTGGCCGAGCGCCCGCTAGGCGAAGCGTCTGGTCAGCCGCGGCGGCAGCACCCACATCAGCCGCACCAGTGGCGCCCATG GCCACCAGGGGACCGCGGCG
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MTSAPIPDITATPAWDALRRHHDQIGNTHLRQFFADDPGRGRELTVSVGDLYIDYSKHRVTRETLALLIDLARTAHLEER RDQMFAGVHINTSEDRAVLHTALRLPRDAELVVDGQDVVTDVHAVLDAMGAFTDRLRSGEWTGATGKRISTVVNIGIGGS DLGPVMVYQALRHYADAGISARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLTNATAARRWLTDALGDAAVSR HFVAVSTNKRLVDDFGINTDNMFGFWDWVGGRYSVDSAIGLSLMTVIGRDAFADFLAGFHIIDRHFATAPLESNAPVLLG LIGLWYSNFFGAQSRTVLPYSNDLSRFPAYLQQLTMESNGKSTRADGSPVSADTGEIFWGEPGTNGQHAFYQLLHQGTRL VPADFIGFAQPLDDLPTAEGTGSMHDLLMSNFFAQTQVLAFGKTAEEIAADGTPAHVVAHKVMPGNRPSTSILASRLTPS VLGQLIALYEHQVFTEGVVWGIDSFDQWGVELGKTQAKALLPVITGAGSPPPQSDSSTDGLVRRYRTERGRAG
Sequences:
>Translated_553_residues MTSAPIPDITATPAWDALRRHHDQIGNTHLRQFFADDPGRGRELTVSVGDLYIDYSKHRVTRETLALLIDLARTAHLEER RDQMFAGVHINTSEDRAVLHTALRLPRDAELVVDGQDVVTDVHAVLDAMGAFTDRLRSGEWTGATGKRISTVVNIGIGGS DLGPVMVYQALRHYADAGISARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLTNATAARRWLTDALGDAAVSR HFVAVSTNKRLVDDFGINTDNMFGFWDWVGGRYSVDSAIGLSLMTVIGRDAFADFLAGFHIIDRHFATAPLESNAPVLLG LIGLWYSNFFGAQSRTVLPYSNDLSRFPAYLQQLTMESNGKSTRADGSPVSADTGEIFWGEPGTNGQHAFYQLLHQGTRL VPADFIGFAQPLDDLPTAEGTGSMHDLLMSNFFAQTQVLAFGKTAEEIAADGTPAHVVAHKVMPGNRPSTSILASRLTPS VLGQLIALYEHQVFTEGVVWGIDSFDQWGVELGKTQAKALLPVITGAGSPPPQSDSSTDGLVRRYRTERGRAG >Mature_552_residues TSAPIPDITATPAWDALRRHHDQIGNTHLRQFFADDPGRGRELTVSVGDLYIDYSKHRVTRETLALLIDLARTAHLEERR DQMFAGVHINTSEDRAVLHTALRLPRDAELVVDGQDVVTDVHAVLDAMGAFTDRLRSGEWTGATGKRISTVVNIGIGGSD LGPVMVYQALRHYADAGISARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLTNATAARRWLTDALGDAAVSRH FVAVSTNKRLVDDFGINTDNMFGFWDWVGGRYSVDSAIGLSLMTVIGRDAFADFLAGFHIIDRHFATAPLESNAPVLLGL IGLWYSNFFGAQSRTVLPYSNDLSRFPAYLQQLTMESNGKSTRADGSPVSADTGEIFWGEPGTNGQHAFYQLLHQGTRLV PADFIGFAQPLDDLPTAEGTGSMHDLLMSNFFAQTQVLAFGKTAEEIAADGTPAHVVAHKVMPGNRPSTSILASRLTPSV LGQLIALYEHQVFTEGVVWGIDSFDQWGVELGKTQAKALLPVITGAGSPPPQSDSSTDGLVRRYRTERGRAG
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=555, Percent_Identity=47.2072072072072, Blast_Score=521, Evalue=1e-148, Organism=Homo sapiens, GI296080693, Length=555, Percent_Identity=43.6036036036036, Blast_Score=465, Evalue=1e-131, Organism=Escherichia coli, GI1790457, Length=554, Percent_Identity=51.2635379061372, Blast_Score=548, Evalue=1e-157, Organism=Caenorhabditis elegans, GI71996708, Length=539, Percent_Identity=48.60853432282, Blast_Score=498, Evalue=1e-141, Organism=Caenorhabditis elegans, GI71996703, Length=539, Percent_Identity=48.60853432282, Blast_Score=497, Evalue=1e-141, Organism=Saccharomyces cerevisiae, GI6319673, Length=546, Percent_Identity=49.2673992673993, Blast_Score=526, Evalue=1e-150, Organism=Drosophila melanogaster, GI24651916, Length=556, Percent_Identity=49.1007194244604, Blast_Score=530, Evalue=1e-150, Organism=Drosophila melanogaster, GI24651914, Length=556, Percent_Identity=49.1007194244604, Blast_Score=530, Evalue=1e-150, Organism=Drosophila melanogaster, GI17737445, Length=556, Percent_Identity=49.1007194244604, Blast_Score=530, Evalue=1e-150,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 59975; Mature: 59844
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAPIPDITATPAWDALRRHHDQIGNTHLRQFFADDPGRGRELTVSVGDLYIDYSKHRV CCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEECCEEEECHHHHH TRETLALLIDLARTAHLEERRDQMFAGVHINTSEDRAVLHTALRLPRDAELVVDGQDVVT HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCCCEEEECCHHHHH DVHAVLDAMGAFTDRLRSGEWTGATGKRISTVVNIGIGGSDLGPVMVYQALRHYADAGIS HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCC ARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLTNATAARRWLTDALGDAAVSR EEHHCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HFVAVSTNKRLVDDFGINTDNMFGFWDWVGGRYSVDSAIGLSLMTVIGRDAFADFLAGFH EEEEEECCCEEHHHCCCCCCCCCEEHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH IIDRHFATAPLESNAPVLLGLIGLWYSNFFGAQSRTVLPYSNDLSRFPAYLQQLTMESNG HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHCCCC KSTRADGSPVSADTGEIFWGEPGTNGQHAFYQLLHQGTRLVPADFIGFAQPLDDLPTAEG CCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCC TGSMHDLLMSNFFAQTQVLAFGKTAEEIAADGTPAHVVAHKVMPGNRPSTSILASRLTPS CCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHEECCCCCCCCHHHHHHHHCCHH VLGQLIALYEHQVFTEGVVWGIDSFDQWGVELGKTQAKALLPVITGAGSPPPQSDSSTDG HHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHH LVRRYRTERGRAG HHHHHHHHCCCCC >Mature Secondary Structure TSAPIPDITATPAWDALRRHHDQIGNTHLRQFFADDPGRGRELTVSVGDLYIDYSKHRV CCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEECCEEEECHHHHH TRETLALLIDLARTAHLEERRDQMFAGVHINTSEDRAVLHTALRLPRDAELVVDGQDVVT HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCCCEEEECCHHHHH DVHAVLDAMGAFTDRLRSGEWTGATGKRISTVVNIGIGGSDLGPVMVYQALRHYADAGIS HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCC ARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLTNATAARRWLTDALGDAAVSR EEHHCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HFVAVSTNKRLVDDFGINTDNMFGFWDWVGGRYSVDSAIGLSLMTVIGRDAFADFLAGFH EEEEEECCCEEHHHCCCCCCCCCEEHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH IIDRHFATAPLESNAPVLLGLIGLWYSNFFGAQSRTVLPYSNDLSRFPAYLQQLTMESNG HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHCCCC KSTRADGSPVSADTGEIFWGEPGTNGQHAFYQLLHQGTRLVPADFIGFAQPLDDLPTAEG CCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCC TGSMHDLLMSNFFAQTQVLAFGKTAEEIAADGTPAHVVAHKVMPGNRPSTSILASRLTPS CCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHEECCCCCCCCHHHHHHHHCCHH VLGQLIALYEHQVFTEGVVWGIDSFDQWGVELGKTQAKALLPVITGAGSPPPQSDSSTDG HHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHH LVRRYRTERGRAG HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA