| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121636749
Identifier: 121636749
GI number: 121636749
Start: 949333
End: 949974
Strand: Reverse
Name: 121636749
Synonym: BCG_0878c
Alternate gene names: NA
Gene position: 949974-949333 (Counterclockwise)
Preceding gene: 121636751
Following gene: 121636748
Centisome position: 21.72
GC content: 64.64
Gene sequence:
>642_bases GTGCAGACCGGTCAAAACCGGGGCCGCTGGTCCGGTGTCCCCTTGGAAAGTCGGCACGCCCTACGTCGAGACAACCTCGT CGCCGCCGGCGTGCAGTTGCTCGGCGGCGCAGGCGGACCCGCACTCACCGTCCGCGCAGTGTGCCGCCACGCCGGCCTGA CAGAACGCTACTTTTACGAAAGCTTCGCCGACCGTGAACATTTCGTTCGCGCGGTCTACGACGACGTCTGCACACGAGCG ATGGCAACCCTCACGTCCGCGCAAACCCCGCGCGAGGCCGTAGAGCAATTCGTCGAGCTGATGGTCGACGATCCGGTGCG CGGGCGCGTGCTGTTGCTGGCGCCGGCGGTAGAACCGGCCCTGACCCGGTCGGGCGCGGAGTGGATGCCCAACTTCATCG AGTTGCTGCAACGCAAGTTGTCCCGCATCGTTGATCCAGTTCTGCAGAAACTGGTCGCCACCAGCTTGATCGGCGCTCTT ACCGGTCTGTTCACCGCATATCTGAACGGACGGCTGGGAGCCACCCGCAAGCAATTCATCGACTACTGCGTCAACATGTT GCTCAGCACCGCCGCCACCTACGCACCGCACCGCGAGCGGGGAGAATCCGAACACTCCATCCCAGCCGGGCCGCACAACT GA
Upstream 100 bases:
>100_bases GCAGACGTATCTTGGGTCACTGGTGGTTTTGCCTGCTGAATCTTCATTGGCCACACGAATTCTGACTACGCACGTTGTCA CTATGGAGTTTAGGAGAGCT
Downstream 100 bases:
>100_bases GGACGACTGGGGTTCACCCCACGCGGCCACCGGGGCCCGCCGATGCCAGCATCCTGCCCGCTGCTGGCAGCTCAACATGC CGCGCGAAGCCCAAACTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Tetr Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYDDVCTRA MATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGAL TGLFTAYLNGRLGATRKQFIDYCVNMLLSTAATYAPHRERGESEHSIPAGPHN
Sequences:
>Translated_213_residues MQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYDDVCTRA MATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGAL TGLFTAYLNGRLGATRKQFIDYCVNMLLSTAATYAPHRERGESEHSIPAGPHN >Mature_213_residues MQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYDDVCTRA MATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGAL TGLFTAYLNGRLGATRKQFIDYCVNMLLSTAATYAPHRERGESEHSIPAGPHN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23442; Mature: 23442
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHH SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHH LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI HHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN HHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure MQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHH SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHH LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI HHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN HHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA