Definition Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome.
Accession NC_008769
Length 4,374,522

Click here to switch to the map view.

The map label for this gene is 121636281

Identifier: 121636281

GI number: 121636281

Start: 476127

End: 477338

Strand: Reverse

Name: 121636281

Synonym: BCG_0406c

Alternate gene names: NA

Gene position: 477338-476127 (Counterclockwise)

Preceding gene: 121636282

Following gene: 121636280

Centisome position: 10.91

GC content: 70.05

Gene sequence:

>1212_bases
ATGGCCACCCCTGCACTGTTGCCGGGCGTCGACCTCGCGGCGTTCGCGGCAGCGCTGGCAGCGCGCCTTCGCGACGCCGG
GATACCGGTGTCCGCCAGCGGTCAAGCGAGTTTGGTGCAGGCGTTGCAGCAGTTGGTGCCGCGTACGCCGGCGGCGCTGT
ATTGGGGCGCGCGGTTGACCCTGGTCAGCCGTGTAGACGAACTGGCCACGTTCGATGCGGTATTCGCTTCGCTGTTCGGG
GTATTTGGCAGCGCCGAACCCGACGGTGCCAACCGCCCACCACCGCCCATTGCAGGCCCGCGCACACCGGTGGCCGGCGT
CGGGCACCGCGCCAAGCGGCGATCTTGTGCCGCCCAAGCCCAGAATCTGCCCTGGGATACTCGCTCGCTGACGATGGCCA
GCGCCGGTCAGGGCGGACCCAGCCGCACACTGCCCGATGTCCTGCCCAGCCGCATTGTCGCCCGGGCCGACGAGCCATTC
GACCAGTTCGATCCCGACGATCTGCGTCTGCTCGGCGCCTGGCTGGAGGCCACGATGGCGCGCTGGCCGCGGCGGCGCAG
CATGCGATTCGAGTCCAGCCCGCACGGCAAGCGCATCGACCTGCGGGCGACGATGAACGCGTCGCGGTCGACTGGCTGGG
AGTCGGTGCTGTTGGCACGGATCCGGCCCCGCCGACGCCCCAGGCGGGTGCTCCTGCTCTGCGATGTGAGCCGCTCGATG
CAGCCCTACGCCGCCATCTATCTGCATCTGATGCGGGCGGCGGTGCTGCGCCGGGCAGGGGGCCACCCGGAGGTTTTCGC
GTTTTCGACGTCGCTGACTCGACTTACCTCGGTGCTGTCTCATCGCTCGGCCGAGATGGCGCTACATCGGGCCAACGCTA
GGGTGACCGACCGCTACGGCGGTACGTTCATCGGCCGTAGTGTCGCCGCCCTGCTGGCCCCGCCGCATGGCAACGCGTTA
CGCGGCGCGGTGGTGATCATCGCCTCCGACGGCTGGGACAGCGATCCGCCCGACGTGTTGGTGCACGCACTGACCAGGGT
GCGTCGCCGCGCCGAGTTGCTGGTCTGGCTGAACCCTCGCGCGGCACATCCGGAGTTCCAGCCGCGTGCCGGTTCGATGG
CGGCGGCGCTGCCCTATTGCGACCTGTTCCTGCCGGCGCACTCGCTGGCCGGCCTGCACCAGTTGCTGCTGGCGCTGGCC
GGTGCCCGCTAG

Upstream 100 bases:

>100_bases
TGGCCGACGGCGGCCAGCTCAAAAAGTACGGTTCGGCGCTGCTGGCGGCGCTGACCGTGCTGCTGCTGATCTGGGTGCTG
CGCCGGCGGCGATGAATGGG

Downstream 100 bases:

>100_bases
CCGTGTGCGCCCCTCACCACAGCTCGGTGTAGCACTTTGCTATAAGCTGTAACAGATCGCTACACCCGAGGAGAGATGTC
GTGCCCAAAGCCGTCGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: VWA Domain Containing CoxE-Like Protein; VWA Containing CoxE-Like; VWA Containing CoxE-Like Protein; Carbon Monoxide Dehydrogenase E Protein; Carbon Monoxide Dehydrogenase CoxE Subunit; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; VWA Domain CoxE-Like Family Protein; Vwa Domain Coxe-Like Protein; VWA Domain-Containing CoxE-Like Family Protein; CoxE Protein; Von Willebrand Factor Type A Domain-Containing Protein

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MATPALLPGVDLAAFAAALAARLRDAGIPVSASGQASLVQALQQLVPRTPAALYWGARLTLVSRVDELATFDAVFASLFG
VFGSAEPDGANRPPPPIAGPRTPVAGVGHRAKRRSCAAQAQNLPWDTRSLTMASAGQGGPSRTLPDVLPSRIVARADEPF
DQFDPDDLRLLGAWLEATMARWPRRRSMRFESSPHGKRIDLRATMNASRSTGWESVLLARIRPRRRPRRVLLLCDVSRSM
QPYAAIYLHLMRAAVLRRAGGHPEVFAFSTSLTRLTSVLSHRSAEMALHRANARVTDRYGGTFIGRSVAALLAPPHGNAL
RGAVVIIASDGWDSDPPDVLVHALTRVRRRAELLVWLNPRAAHPEFQPRAGSMAAALPYCDLFLPAHSLAGLHQLLLALA
GAR

Sequences:

>Translated_403_residues
MATPALLPGVDLAAFAAALAARLRDAGIPVSASGQASLVQALQQLVPRTPAALYWGARLTLVSRVDELATFDAVFASLFG
VFGSAEPDGANRPPPPIAGPRTPVAGVGHRAKRRSCAAQAQNLPWDTRSLTMASAGQGGPSRTLPDVLPSRIVARADEPF
DQFDPDDLRLLGAWLEATMARWPRRRSMRFESSPHGKRIDLRATMNASRSTGWESVLLARIRPRRRPRRVLLLCDVSRSM
QPYAAIYLHLMRAAVLRRAGGHPEVFAFSTSLTRLTSVLSHRSAEMALHRANARVTDRYGGTFIGRSVAALLAPPHGNAL
RGAVVIIASDGWDSDPPDVLVHALTRVRRRAELLVWLNPRAAHPEFQPRAGSMAAALPYCDLFLPAHSLAGLHQLLLALA
GAR
>Mature_402_residues
ATPALLPGVDLAAFAAALAARLRDAGIPVSASGQASLVQALQQLVPRTPAALYWGARLTLVSRVDELATFDAVFASLFGV
FGSAEPDGANRPPPPIAGPRTPVAGVGHRAKRRSCAAQAQNLPWDTRSLTMASAGQGGPSRTLPDVLPSRIVARADEPFD
QFDPDDLRLLGAWLEATMARWPRRRSMRFESSPHGKRIDLRATMNASRSTGWESVLLARIRPRRRPRRVLLLCDVSRSMQ
PYAAIYLHLMRAAVLRRAGGHPEVFAFSTSLTRLTSVLSHRSAEMALHRANARVTDRYGGTFIGRSVAALLAPPHGNALR
GAVVIIASDGWDSDPPDVLVHALTRVRRRAELLVWLNPRAAHPEFQPRAGSMAAALPYCDLFLPAHSLAGLHQLLLALAG
AR

Specific function: Unknown

COG id: COG3552

COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43538; Mature: 43407

Theoretical pI: Translated: 11.88; Mature: 11.88

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPALLPGVDLAAFAAALAARLRDAGIPVSASGQASLVQALQQLVPRTPAALYWGARLT
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
LVSRVDELATFDAVFASLFGVFGSAEPDGANRPPPPIAGPRTPVAGVGHRAKRRSCAAQA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
QNLPWDTRSLTMASAGQGGPSRTLPDVLPSRIVARADEPFDQFDPDDLRLLGAWLEATMA
HCCCCCCHHEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
RWPRRRSMRFESSPHGKRIDLRATMNASRSTGWESVLLARIRPRRRPRRVLLLCDVSRSM
HCCHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCC
QPYAAIYLHLMRAAVLRRAGGHPEVFAFSTSLTRLTSVLSHRSAEMALHRANARVTDRYG
CHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
GTFIGRSVAALLAPPHGNALRGAVVIIASDGWDSDPPDVLVHALTRVRRRAELLVWLNPR
CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCEEEEECCC
AAHPEFQPRAGSMAAALPYCDLFLPAHSLAGLHQLLLALAGAR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATPALLPGVDLAAFAAALAARLRDAGIPVSASGQASLVQALQQLVPRTPAALYWGARLT
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
LVSRVDELATFDAVFASLFGVFGSAEPDGANRPPPPIAGPRTPVAGVGHRAKRRSCAAQA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
QNLPWDTRSLTMASAGQGGPSRTLPDVLPSRIVARADEPFDQFDPDDLRLLGAWLEATMA
HCCCCCCHHEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
RWPRRRSMRFESSPHGKRIDLRATMNASRSTGWESVLLARIRPRRRPRRVLLLCDVSRSM
HCCHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCC
QPYAAIYLHLMRAAVLRRAGGHPEVFAFSTSLTRLTSVLSHRSAEMALHRANARVTDRYG
CHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC
GTFIGRSVAALLAPPHGNALRGAVVIIASDGWDSDPPDVLVHALTRVRRRAELLVWLNPR
CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCEEEEECCC
AAHPEFQPRAGSMAAALPYCDLFLPAHSLAGLHQLLLALAGAR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA