Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611865

Identifier: 121611865

GI number: 121611865

Start: 5497541

End: 5498863

Strand: Direct

Name: 121611865

Synonym: Veis_4967

Alternate gene names: NA

Gene position: 5497541-5498863 (Clockwise)

Preceding gene: 121611853

Following gene: 121611870

Centisome position: 98.76

GC content: 67.57

Gene sequence:

>1323_bases
ATGATTTCTCACCGTGACCCCAACGCGACCGCCACACCGGACAGTTCCGCCAGCGACGAGGCCCGGTACGACGCGCAGGT
GCTGCGCGACCTGCCGCGCAACTTCGCAGCCAACCTGGCGCATGGCATGTTGGGCATGACCGGGTTCCGGCTCATGAGCG
CGCCGACCTTCGTGCCGGCCTACATCTACATGCTGTCGGGCTCCAAGCTGGCCGTGGGCCTGGCCCTGGGTGCGCAGTTC
CTGGGCATGACCCTGTCCTCCATCTGGGGCGCCACGCTGATCGAACACCGCAACCAGGTGATGCGCGTCGTCTACGCGGT
CGGCTGGCTCATGCGGCTGCAGATCCTGGGTCTGGCGCTCAGTGCCTTCGTGCTCTCAGGCTCCTGGGCGCTGGGGGCGG
CCTGCGTGTTCCTGGCGCTGTTCGGCTTCTTCGGCGGTGTGCAGGGTGTGACCTTCAACGTGCTGATGTCCAAGGTGATC
CCGGTCACGCAGCGCGGCCGGCTCACGGGCATGCGCAACTTCCTGGGCGGGCTCACGGCCTCGGGCGTGGCCTACCTGGG
CGGCGAGTACCTGGTCGGCTCCAACGCCTTCGGCAACGGCTATGCGTCCACCTTCATGCTGGCCTTCATCCTGACCAGCA
TCGGCATCAGCGCGCTGGCCTTCGTGCGCGAGCCCAAGTCGCTGACGGTGCGGGCCTCGCCCTCGCGCTTCATGCAGCGC
CTGGCCGATGTGCCCGGCCTGCTGCGCGCCGATCCGCATTACCGGCGCTTTTTTTTCGCGCGCGCGCTGGCGGCGCTGGG
CACGTCCGCCGTGCCTTTCTACATCCTGCACGCGGGCCAGTTCGTGCGCCTGTCGGGCGCCACGCTGGGCTATTTCTCAC
TGGCCTTTTTGCTGTCGCAAATGATCAGCAACCTGGCCTGGGGCCGCATCGCGGACCGGCATGGCTACCGGCTCGTTTTT
ATCCTGGGCGTGTGCATGTGGTGCGGTGCCACGCTGCTGCTGGTCCTGGGCGGCTCGCTGCCGCTGTTCCTGCTGGCCTT
CTGCGGGCTGGGTGCGGGCTTCGGCGGTTACCAGGTGGCCGCGCAGAACTTCGTGCTGGAATTCGGCAAGGCGCACGAAC
TGCCGATGCTGATCGCCATCTCCGACACGGCCTCGCACCTGATGATGGCCATCGGCCCGCTGGTGGGCGGCATCATCGCC
ACGCAACTGGGCTATGCGCCGATCTTCTGGATGGCGCTGGCCTTCAAGACGCTTGCGCTGGCCATGGTCCTGCGCATCGA
GGAGCCGCGGCACCGGCAGCGGGCAGGGATGCGCGCGTGCTGA

Upstream 100 bases:

>100_bases
CGGGAATTCGGAATCCGGCAGATCGATGATCCAAGTCCCTGTCCATGAATGACTTTTCGAAACGCAGGCGGCGCGGCTGC
CGTAAAAACGTACCGACACC

Downstream 100 bases:

>100_bases
AACTGCGTGCAGTCAGCCATCCGGAACGCGCTTGCGCCCCGGCAGCCTTCGTCAGCGGCCTTGCACGCGCACGACCGGTT
CCGTGCGCTGCCCGGACTGC

Product: major facilitator transporter

Products: NA

Alternate protein names: Permease Of Facilitator Superfamily

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MISHRDPNATATPDSSASDEARYDAQVLRDLPRNFAANLAHGMLGMTGFRLMSAPTFVPAYIYMLSGSKLAVGLALGAQF
LGMTLSSIWGATLIEHRNQVMRVVYAVGWLMRLQILGLALSAFVLSGSWALGAACVFLALFGFFGGVQGVTFNVLMSKVI
PVTQRGRLTGMRNFLGGLTASGVAYLGGEYLVGSNAFGNGYASTFMLAFILTSIGISALAFVREPKSLTVRASPSRFMQR
LADVPGLLRADPHYRRFFFARALAALGTSAVPFYILHAGQFVRLSGATLGYFSLAFLLSQMISNLAWGRIADRHGYRLVF
ILGVCMWCGATLLLVLGGSLPLFLLAFCGLGAGFGGYQVAAQNFVLEFGKAHELPMLIAISDTASHLMMAIGPLVGGIIA
TQLGYAPIFWMALAFKTLALAMVLRIEEPRHRQRAGMRAC

Sequences:

>Translated_440_residues
MISHRDPNATATPDSSASDEARYDAQVLRDLPRNFAANLAHGMLGMTGFRLMSAPTFVPAYIYMLSGSKLAVGLALGAQF
LGMTLSSIWGATLIEHRNQVMRVVYAVGWLMRLQILGLALSAFVLSGSWALGAACVFLALFGFFGGVQGVTFNVLMSKVI
PVTQRGRLTGMRNFLGGLTASGVAYLGGEYLVGSNAFGNGYASTFMLAFILTSIGISALAFVREPKSLTVRASPSRFMQR
LADVPGLLRADPHYRRFFFARALAALGTSAVPFYILHAGQFVRLSGATLGYFSLAFLLSQMISNLAWGRIADRHGYRLVF
ILGVCMWCGATLLLVLGGSLPLFLLAFCGLGAGFGGYQVAAQNFVLEFGKAHELPMLIAISDTASHLMMAIGPLVGGIIA
TQLGYAPIFWMALAFKTLALAMVLRIEEPRHRQRAGMRAC
>Mature_440_residues
MISHRDPNATATPDSSASDEARYDAQVLRDLPRNFAANLAHGMLGMTGFRLMSAPTFVPAYIYMLSGSKLAVGLALGAQF
LGMTLSSIWGATLIEHRNQVMRVVYAVGWLMRLQILGLALSAFVLSGSWALGAACVFLALFGFFGGVQGVTFNVLMSKVI
PVTQRGRLTGMRNFLGGLTASGVAYLGGEYLVGSNAFGNGYASTFMLAFILTSIGISALAFVREPKSLTVRASPSRFMQR
LADVPGLLRADPHYRRFFFARALAALGTSAVPFYILHAGQFVRLSGATLGYFSLAFLLSQMISNLAWGRIADRHGYRLVF
ILGVCMWCGATLLLVLGGSLPLFLLAFCGLGAGFGGYQVAAQNFVLEFGKAHELPMLIAISDTASHLMMAIGPLVGGIIA
TQLGYAPIFWMALAFKTLALAMVLRIEEPRHRQRAGMRAC

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47283; Mature: 47283

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISHRDPNATATPDSSASDEARYDAQVLRDLPRNFAANLAHGMLGMTGFRLMSAPTFVPA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
YIYMLSGSKLAVGLALGAQFLGMTLSSIWGATLIEHRNQVMRVVYAVGWLMRLQILGLAL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFVLSGSWALGAACVFLALFGFFGGVQGVTFNVLMSKVIPVTQRGRLTGMRNFLGGLTA
HHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH
SGVAYLGGEYLVGSNAFGNGYASTFMLAFILTSIGISALAFVREPKSLTVRASPSRFMQR
CCHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHH
LADVPGLLRADPHYRRFFFARALAALGTSAVPFYILHAGQFVRLSGATLGYFSLAFLLSQ
HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHEEECCCEEEECCCHHHHHHHHHHHHH
MISNLAWGRIADRHGYRLVFILGVCMWCGATLLLVLGGSLPLFLLAFCGLGAGFGGYQVA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHH
AQNFVLEFGKAHELPMLIAISDTASHLMMAIGPLVGGIIATQLGYAPIFWMALAFKTLAL
HHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
AMVLRIEEPRHRQRAGMRAC
HHHHHCCCCHHHHHCCCCCC
>Mature Secondary Structure
MISHRDPNATATPDSSASDEARYDAQVLRDLPRNFAANLAHGMLGMTGFRLMSAPTFVPA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
YIYMLSGSKLAVGLALGAQFLGMTLSSIWGATLIEHRNQVMRVVYAVGWLMRLQILGLAL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAFVLSGSWALGAACVFLALFGFFGGVQGVTFNVLMSKVIPVTQRGRLTGMRNFLGGLTA
HHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH
SGVAYLGGEYLVGSNAFGNGYASTFMLAFILTSIGISALAFVREPKSLTVRASPSRFMQR
CCHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHH
LADVPGLLRADPHYRRFFFARALAALGTSAVPFYILHAGQFVRLSGATLGYFSLAFLLSQ
HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHEEECCCEEEECCCHHHHHHHHHHHHH
MISNLAWGRIADRHGYRLVFILGVCMWCGATLLLVLGGSLPLFLLAFCGLGAGFGGYQVA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHH
AQNFVLEFGKAHELPMLIAISDTASHLMMAIGPLVGGIIATQLGYAPIFWMALAFKTLAL
HHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
AMVLRIEEPRHRQRAGMRAC
HHHHHCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA