| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611832
Identifier: 121611832
GI number: 121611832
Start: 5452147
End: 5453415
Strand: Direct
Name: 121611832
Synonym: Veis_4934
Alternate gene names: NA
Gene position: 5452147-5453415 (Clockwise)
Preceding gene: 121611831
Following gene: 121611834
Centisome position: 97.94
GC content: 70.06
Gene sequence:
>1269_bases ATGAAACTCTTTCCTTGCGGCCACGCCACGCACCCCCGCTGGCGCATGGCTGCGGCCCTGGTGCTGGAGCAACTGCGGGC CCGGATGGCCCAGCCTGAATACGCCAGCGCTCCAACGCTGGGCCTGCTCTACATCACCGACCATTACGTCAACGAAGCCC GGGCGCTGCTCGATCACCTGAGCGGCGAACTGCCCGGGGTGACCGACTGGAGCGGCACCGTGGGTGTGGGCGTGGCGGCC AACAACGCCGAGTATTTCGACCAGCCCGGGCTATCGGTGATGCTGCTCGATGTGCCGGCCGACCAGTACCGCGTGTTCTC GGGCGTGGCGCCGTTGCCCACGCACCGCCGCAACGGCGGCTTTGCCGCGCACACGGCGCTGGTCCATGCCGATGGCCACA CGCCCGAGCTGGCGCAGTTGCTGGCCGAGATGGCTGCGCGCACCGACACCGGTTACCTGTTTGGCGGCCTGAGCGCCAGT CGCACGACCAGCGTGCAGTTCGCCGTTGGCGGGGACGGCAACATGGCCGGGCAGGGCGGCGCCGGCGGCGTGTTCGACGC GGGCCTGTCGGGCGTGGCGTTTGGCGCCGGGGTGGCGCTGGTTTCGCGCGTCACGCAGGGTTGCCAGCCCGTGAGTGCGC TGCACCGCATCACGGCAGCGCAGAACAACCTGGTGCTGACGCTCGACGACAAACCGGCGCTGGACATGCTGCTCGACACA CTGGGGGTGTCCCTCGAAAGCGACCCGCAGCCCGCGCTGCGCAAGGTGCGCGCCACGCTGGCCGGGCTGGTCGACGCCGG CGAGCAGCCCCGGGGCCAGCGCCGCATGGGCCACTTCGGCACCGACACGCGCGTGCGCCATATCGTGGGGCTGGACGGCT TGCGCCGAGGCGTGGCCCTGGCCGACGCCGTGCAAGCAGGCATGCAACTGGCGTTTTGCCAGCGCAATGCCGCCGCAGCG CGCGCCGACCTGATGCGCATCTGCGCCGAGATCCGCGAAGAGCTCTCGCCCGAGGAACTGGCGCTCGCGCCCGACATGCC AGGCCGCCATGCGGCACCGCAAACACAGCGGCGCATCTGTGGCGCGATCTATGTGAGTTGCTCGGGCCGTGGCGGCCCGC ACTTTGGCGGGCCTGGCGCCGAATTGCACATCGTGCGCCATGCGCTGGGCGATGTGCCGCTGGCCGGATTCTTCGCCGGG GGCGAAATCGCGCACCACCACCTGTATGGCTACACCGGGGTGCTGACGGTCTTTGCCGACAGCGAATAA
Upstream 100 bases:
>100_bases GCGCAAAACCCCCGTCCGCAGCACCGCTGCGCGCCGACATGCAGGCTGACGGGCGGATGGGTGGTCTGCCGCCCCGCCAT CTCCCCCGTGGGATTCGCCT
Downstream 100 bases:
>100_bases GGGCTTCATGCCCCGTGCAACGGGCATGTGCCCCCAAGCCAGGCGCCGCAGGCGCGCCGGGGGGGCGGATCATGTCGGCA GCCAAGCGTCAACCGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MKLFPCGHATHPRWRMAAALVLEQLRARMAQPEYASAPTLGLLYITDHYVNEARALLDHLSGELPGVTDWSGTVGVGVAA NNAEYFDQPGLSVMLLDVPADQYRVFSGVAPLPTHRRNGGFAAHTALVHADGHTPELAQLLAEMAARTDTGYLFGGLSAS RTTSVQFAVGGDGNMAGQGGAGGVFDAGLSGVAFGAGVALVSRVTQGCQPVSALHRITAAQNNLVLTLDDKPALDMLLDT LGVSLESDPQPALRKVRATLAGLVDAGEQPRGQRRMGHFGTDTRVRHIVGLDGLRRGVALADAVQAGMQLAFCQRNAAAA RADLMRICAEIREELSPEELALAPDMPGRHAAPQTQRRICGAIYVSCSGRGGPHFGGPGAELHIVRHALGDVPLAGFFAG GEIAHHHLYGYTGVLTVFADSE
Sequences:
>Translated_422_residues MKLFPCGHATHPRWRMAAALVLEQLRARMAQPEYASAPTLGLLYITDHYVNEARALLDHLSGELPGVTDWSGTVGVGVAA NNAEYFDQPGLSVMLLDVPADQYRVFSGVAPLPTHRRNGGFAAHTALVHADGHTPELAQLLAEMAARTDTGYLFGGLSAS RTTSVQFAVGGDGNMAGQGGAGGVFDAGLSGVAFGAGVALVSRVTQGCQPVSALHRITAAQNNLVLTLDDKPALDMLLDT LGVSLESDPQPALRKVRATLAGLVDAGEQPRGQRRMGHFGTDTRVRHIVGLDGLRRGVALADAVQAGMQLAFCQRNAAAA RADLMRICAEIREELSPEELALAPDMPGRHAAPQTQRRICGAIYVSCSGRGGPHFGGPGAELHIVRHALGDVPLAGFFAG GEIAHHHLYGYTGVLTVFADSE >Mature_422_residues MKLFPCGHATHPRWRMAAALVLEQLRARMAQPEYASAPTLGLLYITDHYVNEARALLDHLSGELPGVTDWSGTVGVGVAA NNAEYFDQPGLSVMLLDVPADQYRVFSGVAPLPTHRRNGGFAAHTALVHADGHTPELAQLLAEMAARTDTGYLFGGLSAS RTTSVQFAVGGDGNMAGQGGAGGVFDAGLSGVAFGAGVALVSRVTQGCQPVSALHRITAAQNNLVLTLDDKPALDMLLDT LGVSLESDPQPALRKVRATLAGLVDAGEQPRGQRRMGHFGTDTRVRHIVGLDGLRRGVALADAVQAGMQLAFCQRNAAAA RADLMRICAEIREELSPEELALAPDMPGRHAAPQTQRRICGAIYVSCSGRGGPHFGGPGAELHIVRHALGDVPLAGFFAG GEIAHHHLYGYTGVLTVFADSE
Specific function: Unknown
COG id: COG4398
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv0874c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019494 - InterPro: IPR013702 - InterPro: IPR016741 [H]
Pfam domain/function: PF08495 FIST; PF10442 FIST_C [H]
EC number: NA
Molecular weight: Translated: 44348; Mature: 44348
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFPCGHATHPRWRMAAALVLEQLRARMAQPEYASAPTLGLLYITDHYVNEARALLDHL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHH SGELPGVTDWSGTVGVGVAANNAEYFDQPGLSVMLLDVPADQYRVFSGVAPLPTHRRNGG CCCCCCCCCCCCCEEEEEEECCCHHHCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCC FAAHTALVHADGHTPELAQLLAEMAARTDTGYLFGGLSASRTTSVQFAVGGDGNMAGQGG EEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCC AGGVFDAGLSGVAFGAGVALVSRVTQGCQPVSALHRITAAQNNLVLTLDDKPALDMLLDT CCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH LGVSLESDPQPALRKVRATLAGLVDAGEQPRGQRRMGHFGTDTRVRHIVGLDGLRRGVAL HCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHCHHHHHHHHHH ADAVQAGMQLAFCQRNAAAARADLMRICAEIREELSPEELALAPDMPGRHAAPQTQRRIC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHE GAIYVSCSGRGGPHFGGPGAELHIVRHALGDVPLAGFFAGGEIAHHHLYGYTGVLTVFAD EEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHCEEEEEEEEEC SE CC >Mature Secondary Structure MKLFPCGHATHPRWRMAAALVLEQLRARMAQPEYASAPTLGLLYITDHYVNEARALLDHL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHH SGELPGVTDWSGTVGVGVAANNAEYFDQPGLSVMLLDVPADQYRVFSGVAPLPTHRRNGG CCCCCCCCCCCCCEEEEEEECCCHHHCCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCC FAAHTALVHADGHTPELAQLLAEMAARTDTGYLFGGLSASRTTSVQFAVGGDGNMAGQGG EEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCC AGGVFDAGLSGVAFGAGVALVSRVTQGCQPVSALHRITAAQNNLVLTLDDKPALDMLLDT CCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHH LGVSLESDPQPALRKVRATLAGLVDAGEQPRGQRRMGHFGTDTRVRHIVGLDGLRRGVAL HCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHCHHHHHHHHHH ADAVQAGMQLAFCQRNAAAARADLMRICAEIREELSPEELALAPDMPGRHAAPQTQRRIC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHE GAIYVSCSGRGGPHFGGPGAELHIVRHALGDVPLAGFFAGGEIAHHHLYGYTGVLTVFAD EEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHCEEEEEEEEEC SE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]