| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611799
Identifier: 121611799
GI number: 121611799
Start: 5416680
End: 5418557
Strand: Direct
Name: 121611799
Synonym: Veis_4900
Alternate gene names: NA
Gene position: 5416680-5418557 (Clockwise)
Preceding gene: 121611794
Following gene: 121611811
Centisome position: 97.3
GC content: 54.21
Gene sequence:
>1878_bases ATGACTGACCACCGTTACCCCACCGACTTGGTGATCACGAGAAAAGACTTCGCTGACAGCGGATGGGATGTGGTGCTGAA TCAAACGCCGCTTGAAGGTTACTACGCGATGTCGCAGGCACTCTCAGTCGCTGAGCGCAAGGCCATTGATGAGAATCGGA ACGAGCACGGCAAGGTGCTCTGGCTACTTGCTGATGTCTGCTCAATGATGCTGTCGCCATCAAGTCAGAACGAACCATTC AAGCCATCCATCATATTTACCAATGGTCGTCGTACGGCGATTCCGGACGATCTGACCGCCACCGACGTTGAATTTTTCGC CGAGATCGCCGAAACGGTGACCGATATCCGGCTGCGTGCGCGTCTTGCCGATCTGGTTTGGTTAAAAGGAAAGCCCAGGA ATGTGAAGTTCGCACTCATGGCCATCGACGCATATCGTGACATCCCGCTGGACGCAGAGACGTGGGTTCACGATGGGGAG AAATGTTGGGAGCGAGCCATCAGCCTGGCCCAGATGATCAAAGTCAGCGCTGGCGACCGGCTTGAGCAAATGGAGACTCA TATCGTCGCTTCGTTCAATGCCGCAACGAGACAAGATGATTTTCTCGGGCTCTGGTTGGCGAGACTGCTGAAAACGAACG GATGGGGACGACTTCATCAAACCGATATCGCGCAGAAACTGGAAACACTGGCTCGGGAATTCGATGGCGAAAGGAATTTG TACAATGCGCGTAAGTATTTCTCCGCATCCGCCGACTGGTACAGAACCGTCCCTGACAAGGCAAAATCAGCCGAGATGAC GGTATTTGTTGCCGAGAACTGGGTCAAGGAAGCCGTCGCCCGGGTCTCGTCAGACAATCCGAGTCACATGGCAGCAGCAA GTTTTTACGAAAATGCCATCCAGATTTATCGAACGATTCCAAAAACTGAGCGTACCGCGCACCGAGTTGATGAGAGGGTC GCCGAGCTTCACGCTCATCTGAATGAGTCTGGAGAGAAGACCCTGGGTGAAATGACGCGAATCAGCACCCCGGGCATCGA CATCACTTCACTTGCCGAAAAGGTTCGTATATCTGTCCGCGGGAAATCGGCTACCGAGGCACTCCTGGTTTTTGCGCATC TCTGTGATGGAGCAGCGAAGGTGGACGAATTGCGCAATCGCACGTTGGAACAGATGCGAGAATTCCCTATTCAGTGGTCG GTTGCAATGACCGTGAGGAGTCAAGACGGTCGGGTGATCGCAAAGCGGCCGCCGATGAACTTCAATGCGAAGCCGACGGA AGATAACGAAGACGCCATCCGTTATCAGATGATTCATCTCTACAGCAAGAATGTCGGTATCGCGGCCCATGGCATCATCT TGCCGGCTCTCGAAGTCCTGTTGCTTGAACACCGGTTGCGCGAGGCCGATTTCGTCGATATCGCCAATCAATCACCCATC GTCCCGAAAGGACGAGCCGGGCTTTTCGGCAAGGCATTGTTCGCGGGCTTCGACCGAGACTTTGTCACGGCGCTGCACCT ATTGCTGCCGCAGATCGAGCACTTGGTTCGCGTACACCTCAAACAAGCAGGGGCCAAGACAACGAATCTCGACAAGGATG GGATTGAAAACGAAAACGGGATGAGTACCTTGATGAATCTGCCAGAAGCCGAGCAGGTTTTCGGCAGGAATCTCGCCTTT GAGCTCAGGGCACTGTTCTGCGATGCTTTCGGCCCCAATTTGCGCAACGAACTCGCCCATGGACTGCTCGACGAAGAAGC GTTCCATTCGCCATTTGCCATTTATGCGTGGTGGTTAGGGTTGCATCTCGTCTTTCACCCTTGGTGGAACATGGCGCACA AGAGCGCGACAGAGGGCGAGGCAGGTCCAGACGACTGA
Upstream 100 bases:
>100_bases GCGCAGGAATCCATGCACGCAAATTTGCAGCAACGATTGCGACGACAGACGCAGGCTCCGCACCCGATAATGAGGACCTG AACGACAGGACATATGGCAC
Downstream 100 bases:
>100_bases GTGATGGCAGTCCCCGCCGCAGGGACCGCGCCACGCAGAGTGCGCCGAGAGTGCCGACGACCTTTCGCCAGCCGTTCCAG CCTTCAACCTTCAGCTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 625; Mature: 624
Protein sequence:
>625_residues MTDHRYPTDLVITRKDFADSGWDVVLNQTPLEGYYAMSQALSVAERKAIDENRNEHGKVLWLLADVCSMMLSPSSQNEPF KPSIIFTNGRRTAIPDDLTATDVEFFAEIAETVTDIRLRARLADLVWLKGKPRNVKFALMAIDAYRDIPLDAETWVHDGE KCWERAISLAQMIKVSAGDRLEQMETHIVASFNAATRQDDFLGLWLARLLKTNGWGRLHQTDIAQKLETLAREFDGERNL YNARKYFSASADWYRTVPDKAKSAEMTVFVAENWVKEAVARVSSDNPSHMAAASFYENAIQIYRTIPKTERTAHRVDERV AELHAHLNESGEKTLGEMTRISTPGIDITSLAEKVRISVRGKSATEALLVFAHLCDGAAKVDELRNRTLEQMREFPIQWS VAMTVRSQDGRVIAKRPPMNFNAKPTEDNEDAIRYQMIHLYSKNVGIAAHGIILPALEVLLLEHRLREADFVDIANQSPI VPKGRAGLFGKALFAGFDRDFVTALHLLLPQIEHLVRVHLKQAGAKTTNLDKDGIENENGMSTLMNLPEAEQVFGRNLAF ELRALFCDAFGPNLRNELAHGLLDEEAFHSPFAIYAWWLGLHLVFHPWWNMAHKSATEGEAGPDD
Sequences:
>Translated_625_residues MTDHRYPTDLVITRKDFADSGWDVVLNQTPLEGYYAMSQALSVAERKAIDENRNEHGKVLWLLADVCSMMLSPSSQNEPF KPSIIFTNGRRTAIPDDLTATDVEFFAEIAETVTDIRLRARLADLVWLKGKPRNVKFALMAIDAYRDIPLDAETWVHDGE KCWERAISLAQMIKVSAGDRLEQMETHIVASFNAATRQDDFLGLWLARLLKTNGWGRLHQTDIAQKLETLAREFDGERNL YNARKYFSASADWYRTVPDKAKSAEMTVFVAENWVKEAVARVSSDNPSHMAAASFYENAIQIYRTIPKTERTAHRVDERV AELHAHLNESGEKTLGEMTRISTPGIDITSLAEKVRISVRGKSATEALLVFAHLCDGAAKVDELRNRTLEQMREFPIQWS VAMTVRSQDGRVIAKRPPMNFNAKPTEDNEDAIRYQMIHLYSKNVGIAAHGIILPALEVLLLEHRLREADFVDIANQSPI VPKGRAGLFGKALFAGFDRDFVTALHLLLPQIEHLVRVHLKQAGAKTTNLDKDGIENENGMSTLMNLPEAEQVFGRNLAF ELRALFCDAFGPNLRNELAHGLLDEEAFHSPFAIYAWWLGLHLVFHPWWNMAHKSATEGEAGPDD >Mature_624_residues TDHRYPTDLVITRKDFADSGWDVVLNQTPLEGYYAMSQALSVAERKAIDENRNEHGKVLWLLADVCSMMLSPSSQNEPFK PSIIFTNGRRTAIPDDLTATDVEFFAEIAETVTDIRLRARLADLVWLKGKPRNVKFALMAIDAYRDIPLDAETWVHDGEK CWERAISLAQMIKVSAGDRLEQMETHIVASFNAATRQDDFLGLWLARLLKTNGWGRLHQTDIAQKLETLAREFDGERNLY NARKYFSASADWYRTVPDKAKSAEMTVFVAENWVKEAVARVSSDNPSHMAAASFYENAIQIYRTIPKTERTAHRVDERVA ELHAHLNESGEKTLGEMTRISTPGIDITSLAEKVRISVRGKSATEALLVFAHLCDGAAKVDELRNRTLEQMREFPIQWSV AMTVRSQDGRVIAKRPPMNFNAKPTEDNEDAIRYQMIHLYSKNVGIAAHGIILPALEVLLLEHRLREADFVDIANQSPIV PKGRAGLFGKALFAGFDRDFVTALHLLLPQIEHLVRVHLKQAGAKTTNLDKDGIENENGMSTLMNLPEAEQVFGRNLAFE LRALFCDAFGPNLRNELAHGLLDEEAFHSPFAIYAWWLGLHLVFHPWWNMAHKSATEGEAGPDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70513; Mature: 70382
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHRYPTDLVITRKDFADSGWDVVLNQTPLEGYYAMSQALSVAERKAIDENRNEHGKVL CCCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEE WLLADVCSMMLSPSSQNEPFKPSIIFTNGRRTAIPDDLTATDVEFFAEIAETVTDIRLRA EHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RLADLVWLKGKPRNVKFALMAIDAYRDIPLDAETWVHDGEKCWERAISLAQMIKVSAGDR HHHHHHEECCCCCCEEEEEEEEEHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCH LEQMETHIVASFNAATRQDDFLGLWLARLLKTNGWGRLHQTDIAQKLETLAREFDGERNL HHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCH YNARKYFSASADWYRTVPDKAKSAEMTVFVAENWVKEAVARVSSDNPSHMAAASFYENAI HHHHHHHCCCCCHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH QIYRTIPKTERTAHRVDERVAELHAHLNESGEKTLGEMTRISTPGIDITSLAEKVRISVR HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHEEEEC GKSATEALLVFAHLCDGAAKVDELRNRTLEQMREFPIQWSVAMTVRSQDGRVIAKRPPMN CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEECCCCC FNAKPTEDNEDAIRYQMIHLYSKNVGIAAHGIILPALEVLLLEHRLREADFVDIANQSPI CCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC VPKGRAGLFGKALFAGFDRDFVTALHLLLPQIEHLVRVHLKQAGAKTTNLDKDGIENENG CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC MSTLMNLPEAEQVFGRNLAFELRALFCDAFGPNLRNELAHGLLDEEAFHSPFAIYAWWLG HHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHH LHLVFHPWWNMAHKSATEGEAGPDD HHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TDHRYPTDLVITRKDFADSGWDVVLNQTPLEGYYAMSQALSVAERKAIDENRNEHGKVL CCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEE WLLADVCSMMLSPSSQNEPFKPSIIFTNGRRTAIPDDLTATDVEFFAEIAETVTDIRLRA EHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RLADLVWLKGKPRNVKFALMAIDAYRDIPLDAETWVHDGEKCWERAISLAQMIKVSAGDR HHHHHHEECCCCCCEEEEEEEEEHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCH LEQMETHIVASFNAATRQDDFLGLWLARLLKTNGWGRLHQTDIAQKLETLAREFDGERNL HHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCH YNARKYFSASADWYRTVPDKAKSAEMTVFVAENWVKEAVARVSSDNPSHMAAASFYENAI HHHHHHHCCCCCHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH QIYRTIPKTERTAHRVDERVAELHAHLNESGEKTLGEMTRISTPGIDITSLAEKVRISVR HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHEEEEC GKSATEALLVFAHLCDGAAKVDELRNRTLEQMREFPIQWSVAMTVRSQDGRVIAKRPPMN CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEECCCCC FNAKPTEDNEDAIRYQMIHLYSKNVGIAAHGIILPALEVLLLEHRLREADFVDIANQSPI CCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC VPKGRAGLFGKALFAGFDRDFVTALHLLLPQIEHLVRVHLKQAGAKTTNLDKDGIENENG CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC MSTLMNLPEAEQVFGRNLAFELRALFCDAFGPNLRNELAHGLLDEEAFHSPFAIYAWWLG HHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHH LHLVFHPWWNMAHKSATEGEAGPDD HHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA