Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is livJ [C]

Identifier: 121611777

GI number: 121611777

Start: 5394515

End: 5395651

Strand: Direct

Name: livJ [C]

Synonym: Veis_4876

Alternate gene names: 121611777

Gene position: 5394515-5395651 (Clockwise)

Preceding gene: 121611766

Following gene: 121611781

Centisome position: 96.91

GC content: 64.91

Gene sequence:

>1137_bases
ATGCCGGGACGCAGACGATTTTCCATGGGCCTGGGTGCCGTGGCGCTCGGCGGCTTCCATCTTGCGCGGGCACAGGCAGA
AGGCCGCATCGTGCTGGGGCAATCGGCCCCTTTCACCGGCCCTGTGGCGCAACTGGGTGTGCAGTTCAACCTGGGCGCGC
AACTCTTTTTCGACCAGCTCAACGCCCAGGGTGGCGTGGGCAGGCGACAGGTGGAACTGCGCACCATGGACGATGGCTAT
GAGCCCGACCGCTGTGCCGAAAATACCCGCAAGTTCATTGCCGACGATGTGTTCGCGCTGTTCGGCTACATCGGCACCCC
CACCAGTTTGGCCGCGCTGCCGCTGTTCACCCGAGACAAGTTGCCGTTCTTCGGCCCGTTCACCGGGGCCGAGGCGTTGC
GCCAGCCGTTCAATCGGCTCATCTTTCATGTGCGCGCTTCGTACTACGACGAGACCGCGCTCATCGTGCGCCACCTGACG
CACCTGGGGATGGACAAGATCGCCGTGCTCTACCAGAACGACGCCTATGGCAAGACGGGCCTGGATGGCGTGACCAAGGC
GCTTGCCGACCACAAGCTGGTGCCCGTGGCCACCGCCACGGTCGAACGCAATTCCACGGACGTGGCGGCTGCGGTCGACA
AACTGGTGCCCGGCATGCCCCACGCCGTGGTGCAGGTCACGACCTATGCGCCGGCCGCAGCCTTTGTGCGCGCCGCGCGC
AAGGCGGGTTTTGGCGGCACCTTCCACAACGTATCGTTCGTCGGCGCGCAGGCGCTGGCCGACGAACTGGGATCGGATGC
CGCCGGCGTGACGGTGTCACAGGTGGTGCACTCGCCCTACCAAGCCTCACGCCAGATCACGCGCGAGTTTCTCGATGCCA
TCAAAAAAGGCGGCAACAAGGTGCAAGCCAACTATTCGAGCGCAGAGGGCTACCTGGCCGCGCGCGTGCTGACCGAGGGC
CTGCGCCAGGCGCAAGGCAGCGGCAAGATCACGCGCGAGAACTTCATCACGGGCATCGAAACGATCGGCAGCCACTCGAT
CGCGGGCTTTGCGGTGTCGTTCAGCGCCACCGACCATGTCGGATCGAAGTTTGTCGAAATGTCGATGCTGACCGGCGACG
GGCGCATGCGCACCTGA

Upstream 100 bases:

>100_bases
TCGATCCACCGAAACCACATCTTGTACGCCAATGACTCTACCGTGCTTCGTACCCGATGGCTGTAGCGTGAAGCCCGGCC
TCGGCATGCAGGGCCCCATC

Downstream 100 bases:

>100_bases
GCCAGCGCATGGGTCGGCGCCATCGGCGTGGATGGGTAAATCAGGGCCAGAGCATCAAAGTTTGTTTTCATTCAACGACT
TACGACAGGGCAATCGCATG

Product: extracellular ligand-binding receptor

Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MPGRRRFSMGLGAVALGGFHLARAQAEGRIVLGQSAPFTGPVAQLGVQFNLGAQLFFDQLNAQGGVGRRQVELRTMDDGY
EPDRCAENTRKFIADDVFALFGYIGTPTSLAALPLFTRDKLPFFGPFTGAEALRQPFNRLIFHVRASYYDETALIVRHLT
HLGMDKIAVLYQNDAYGKTGLDGVTKALADHKLVPVATATVERNSTDVAAAVDKLVPGMPHAVVQVTTYAPAAAFVRAAR
KAGFGGTFHNVSFVGAQALADELGSDAAGVTVSQVVHSPYQASRQITREFLDAIKKGGNKVQANYSSAEGYLAARVLTEG
LRQAQGSGKITRENFITGIETIGSHSIAGFAVSFSATDHVGSKFVEMSMLTGDGRMRT

Sequences:

>Translated_378_residues
MPGRRRFSMGLGAVALGGFHLARAQAEGRIVLGQSAPFTGPVAQLGVQFNLGAQLFFDQLNAQGGVGRRQVELRTMDDGY
EPDRCAENTRKFIADDVFALFGYIGTPTSLAALPLFTRDKLPFFGPFTGAEALRQPFNRLIFHVRASYYDETALIVRHLT
HLGMDKIAVLYQNDAYGKTGLDGVTKALADHKLVPVATATVERNSTDVAAAVDKLVPGMPHAVVQVTTYAPAAAFVRAAR
KAGFGGTFHNVSFVGAQALADELGSDAAGVTVSQVVHSPYQASRQITREFLDAIKKGGNKVQANYSSAEGYLAARVLTEG
LRQAQGSGKITRENFITGIETIGSHSIAGFAVSFSATDHVGSKFVEMSMLTGDGRMRT
>Mature_377_residues
PGRRRFSMGLGAVALGGFHLARAQAEGRIVLGQSAPFTGPVAQLGVQFNLGAQLFFDQLNAQGGVGRRQVELRTMDDGYE
PDRCAENTRKFIADDVFALFGYIGTPTSLAALPLFTRDKLPFFGPFTGAEALRQPFNRLIFHVRASYYDETALIVRHLTH
LGMDKIAVLYQNDAYGKTGLDGVTKALADHKLVPVATATVERNSTDVAAAVDKLVPGMPHAVVQVTTYAPAAAFVRAARK
AGFGGTFHNVSFVGAQALADELGSDAAGVTVSQVVHSPYQASRQITREFLDAIKKGGNKVQANYSSAEGYLAARVLTEGL
RQAQGSGKITRENFITGIETIGSHSIAGFAVSFSATDHVGSKFVEMSMLTGDGRMRT

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 40406; Mature: 40275

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGRRRFSMGLGAVALGGFHLARAQAEGRIVLGQSAPFTGPVAQLGVQFNLGAQLFFDQL
CCCCCCHHCCCCHHHHCCHHHHHHCCCCCEEEECCCCCCCHHHHHCEEECCCHHHHHHHH
NAQGGVGRRQVELRTMDDGYEPDRCAENTRKFIADDVFALFGYIGTPTSLAALPLFTRDK
CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEECCC
LPFFGPFTGAEALRQPFNRLIFHVRASYYDETALIVRHLTHLGMDKIAVLYQNDAYGKTG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
LDGVTKALADHKLVPVATATVERNSTDVAAAVDKLVPGMPHAVVQVTTYAPAAAFVRAAR
HHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCHHEEEEECCCHHHHHHHHHH
KAGFGGTFHNVSFVGAQALADELGSDAAGVTVSQVVHSPYQASRQITREFLDAIKKGGNK
HCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCE
VQANYSSAEGYLAARVLTEGLRQAQGSGKITRENFITGIETIGSHSIAGFAVSFSATDHV
EEECCCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCEEEEEEEECCCHHH
GSKFVEMSMLTGDGRMRT
HHHHHEEEEEECCCCCCC
>Mature Secondary Structure 
PGRRRFSMGLGAVALGGFHLARAQAEGRIVLGQSAPFTGPVAQLGVQFNLGAQLFFDQL
CCCCCHHCCCCHHHHCCHHHHHHCCCCCEEEECCCCCCCHHHHHCEEECCCHHHHHHHH
NAQGGVGRRQVELRTMDDGYEPDRCAENTRKFIADDVFALFGYIGTPTSLAALPLFTRDK
CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEECCC
LPFFGPFTGAEALRQPFNRLIFHVRASYYDETALIVRHLTHLGMDKIAVLYQNDAYGKTG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
LDGVTKALADHKLVPVATATVERNSTDVAAAVDKLVPGMPHAVVQVTTYAPAAAFVRAAR
HHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCHHEEEEECCCHHHHHHHHHH
KAGFGGTFHNVSFVGAQALADELGSDAAGVTVSQVVHSPYQASRQITREFLDAIKKGGNK
HCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCE
VQANYSSAEGYLAARVLTEGLRQAQGSGKITRENFITGIETIGSHSIAGFAVSFSATDHV
EEECCCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCEEEEEEEECCCHHH
GSKFVEMSMLTGDGRMRT
HHHHHEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]

Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA