| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611673
Identifier: 121611673
GI number: 121611673
Start: 5263498
End: 5264415
Strand: Direct
Name: 121611673
Synonym: Veis_4769
Alternate gene names: NA
Gene position: 5263498-5264415 (Clockwise)
Preceding gene: 121611672
Following gene: 121611674
Centisome position: 94.55
GC content: 63.94
Gene sequence:
>918_bases ATGGCGGCGCGCAGCCTGCGACATCTGATCCGTGACGCGACACTAGTCTGTTCCGCCTATTTCATCCACGAGTTTGCGCA CCAGACGATTTTCAGGAGCGCGCAGGCGAATGCCCGCTGGGGCCTGCTGATGGGTTGGTTGAACGGCAGTTGTTTTGCGC GTTTCGACGACCTGCGGCGCAAGCACATGCGCCACCATCTGGAGCGGGCCGATGTTCTGACGTTCGATGCCAAGGGATTT TTGCTGCGCTCACCGGCGTGGTTGCGCCGCACCGTCGTGGCACTGGAGTGGGCTTACTTCCCTGCGGTCGAGTACCTGAT GCGCGCCTTCGTGATCCTGATGCCGTTTCGCGCGGGCGGCACGGCGTCTGCGCGCCTGCGTATCGTGGCCATCGCGCTGC TGCGGCTGGCGGCGCTGGCGCTGCTGGCCATCGCCTCGCCCAAGGCGCTGCTGCTGTATTGCCTGGCGGTTCTGATCTTC ATCACCGTGCTGCGCTTTGCCGACTGCTTTCAGCACACCTACGACGCCTATCCGATCCTGGACGACAGGCCCTTGCCGCA AGACAAGATACGCGACCGCGACTATGGGCAGGCGCATACGTTCACCGATGTGGCGGGCGTTTCCGACGCATGGGGCCATG CCCTGCTGAACATGGTGTGGCTGAACTTCGGTTTCCACAACGCGCACCACGAACGCCCCACCGTGCCCTGGCACCGTTTG CCGGCCTACCACCGCACGCTGTACCGGCCAGACCATGCACAGGTGATTACCGTGGGCGAGTTGCTGCACAGCTTTCATGC CAACCGCATCCGGCGCATTTTTGCGCAAGACTACGGCCAGGTGGGGCCGTTCGGCACACCGGGCCGGGCCGATCGCTTCG TGGGCGCCGTCGGCGTCTCATTTCTGACGGCGGTTTGA
Upstream 100 bases:
>100_bases TCTGTCGGTCTGCGCTGGCCATCGAAGCGCATCGCGGCGTTGCATCGCTTGCCAATACAGCTCGGTATGGGCTGCGCGAT GCGCCTTGCGCTGCGCTCCG
Downstream 100 bases:
>100_bases CATGACCTGCCGCCATCGCGTGCTGCTGCCGACGGCTGCCGTTGCCTGGCCGGCGAAGGTGGCGCAACGGGCTTTACGAG AACCAATGGTTTTTGATCGA
Product: fatty acid desaturase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MAARSLRHLIRDATLVCSAYFIHEFAHQTIFRSAQANARWGLLMGWLNGSCFARFDDLRRKHMRHHLERADVLTFDAKGF LLRSPAWLRRTVVALEWAYFPAVEYLMRAFVILMPFRAGGTASARLRIVAIALLRLAALALLAIASPKALLLYCLAVLIF ITVLRFADCFQHTYDAYPILDDRPLPQDKIRDRDYGQAHTFTDVAGVSDAWGHALLNMVWLNFGFHNAHHERPTVPWHRL PAYHRTLYRPDHAQVITVGELLHSFHANRIRRIFAQDYGQVGPFGTPGRADRFVGAVGVSFLTAV
Sequences:
>Translated_305_residues MAARSLRHLIRDATLVCSAYFIHEFAHQTIFRSAQANARWGLLMGWLNGSCFARFDDLRRKHMRHHLERADVLTFDAKGF LLRSPAWLRRTVVALEWAYFPAVEYLMRAFVILMPFRAGGTASARLRIVAIALLRLAALALLAIASPKALLLYCLAVLIF ITVLRFADCFQHTYDAYPILDDRPLPQDKIRDRDYGQAHTFTDVAGVSDAWGHALLNMVWLNFGFHNAHHERPTVPWHRL PAYHRTLYRPDHAQVITVGELLHSFHANRIRRIFAQDYGQVGPFGTPGRADRFVGAVGVSFLTAV >Mature_304_residues AARSLRHLIRDATLVCSAYFIHEFAHQTIFRSAQANARWGLLMGWLNGSCFARFDDLRRKHMRHHLERADVLTFDAKGFL LRSPAWLRRTVVALEWAYFPAVEYLMRAFVILMPFRAGGTASARLRIVAIALLRLAALALLAIASPKALLLYCLAVLIFI TVLRFADCFQHTYDAYPILDDRPLPQDKIRDRDYGQAHTFTDVAGVSDAWGHALLNMVWLNFGFHNAHHERPTVPWHRLP AYHRTLYRPDHAQVITVGELLHSFHANRIRRIFAQDYGQVGPFGTPGRADRFVGAVGVSFLTAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34742; Mature: 34611
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARSLRHLIRDATLVCSAYFIHEFAHQTIFRSAQANARWGLLMGWLNGSCFARFDDLRR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH KHMRHHLERADVLTFDAKGFLLRSPAWLRRTVVALEWAYFPAVEYLMRAFVILMPFRAGG HHHHHHHHHHHEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TASARLRIVAIALLRLAALALLAIASPKALLLYCLAVLIFITVLRFADCFQHTYDAYPIL CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DDRPLPQDKIRDRDYGQAHTFTDVAGVSDAWGHALLNMVWLNFGFHNAHHERPTVPWHRL CCCCCCHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHC PAYHRTLYRPDHAQVITVGELLHSFHANRIRRIFAQDYGQVGPFGTPGRADRFVGAVGVS CHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH FLTAV HHHCC >Mature Secondary Structure AARSLRHLIRDATLVCSAYFIHEFAHQTIFRSAQANARWGLLMGWLNGSCFARFDDLRR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHH KHMRHHLERADVLTFDAKGFLLRSPAWLRRTVVALEWAYFPAVEYLMRAFVILMPFRAGG HHHHHHHHHHHEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TASARLRIVAIALLRLAALALLAIASPKALLLYCLAVLIFITVLRFADCFQHTYDAYPIL CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DDRPLPQDKIRDRDYGQAHTFTDVAGVSDAWGHALLNMVWLNFGFHNAHHERPTVPWHRL CCCCCCHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHC PAYHRTLYRPDHAQVITVGELLHSFHANRIRRIFAQDYGQVGPFGTPGRADRFVGAVGVS CHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH FLTAV HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA