| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is apbA [H]
Identifier: 121611563
GI number: 121611563
Start: 5147537
End: 5148457
Strand: Direct
Name: apbA [H]
Synonym: Veis_4655
Alternate gene names: 121611563
Gene position: 5147537-5148457 (Clockwise)
Preceding gene: 121611562
Following gene: 121611564
Centisome position: 92.47
GC content: 61.78
Gene sequence:
>921_bases ATGAAAATCGCAATTGTGGGCTGCGGGGCGATGGGTTCCGTCTATGCGGGATTGCTGGCGTCCGCAGGGAACTCGTTATG GATCGTGGATCGCTGGAAGGCACACGTGGAGGCGATCAACAGTCGGGGGTTGCGACTGGAAGGACCGCAGCGTGATCTCA CGGCCTTCGCACACGCGTCGACGACAGCGCCTGACGAGCCGATGGACTTGGTCATCATCGCAGTCAAGGCCTCCGACGTG GAAACTGGCGCTCAGCAAACGCTGTCAATGATCGGCCCCGAAACCATTGTCTTGACGATCCAGAACGGCCTTGGCAGCGC TGATGCTGTGGCGCAAGTGGTGGGTGTTGACCGGCTTGCTGTCGGCATCGCCAGCGGATTTGGGGCATCCCTGAAAGGGC CGGGGCACGCTCACCACAACGCGATGCAGGCGCTGCGCTTCGGTGCCTACTCAAGTCTTCCGTATGAGCGGGTCGTTGCC GTGGCCCGCGTATGGGAAAGTGCGGGATTCGATGCGAAAGCAATCCGTGATATCGCTGTGATGCAGTGGGAGAAGCTCAT CTGCAACGTCGCATACAGCGCGCCCTGTGCGTTGACGGGCATGACGGTCGGGGAGGTCATGAATGACCCGTGCATGGGGC CGGTGAGTCAGGCCGCGGCGACTGAGGCGTGGAGCGTCGCCAGGGCGCTGGGAATTCAGATCGATGTGGACGACCCCGTG GCGCATGTCAGGGCGTTCGGGGCACGGATGCCGGCCGCGAAGCCCTCGGCATTGCTGGATCACGAGGCGGGGCGCATCAG TGAAATCGACGTCATCAATGGAGCCGTGCCGACGCAGGGCAACAAGCTGGGCATTGCGACGCCTGTCAACAGCACATTGA CGCAGTTGGTGAGGGTCAAGGAACGTCAGTTTCGAAAGTAG
Upstream 100 bases:
>100_bases TATGCCATGCCGACTCAGGCACCAGGCTTCGGCCTGGAGGAGAAGCCCGGGTTGAGCGAGGCCATCGCTGAACTGATCAA GAGGTGAGGGGCAAGTCGTT
Downstream 100 bases:
>100_bases CGCACCTATGAAGTCCTTCGTCCTTCACCGAGGTCTCGCGGTCCCGATGGCACGAGCCAACATCGACACGGATGCGATTC TTCCGAAGCAATTCATGAAG
Product: 2-dehydropantoate 2-reductase
Products: NA
Alternate protein names: Ketopantoate reductase; KPA reductase; KPR [H]
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MKIAIVGCGAMGSVYAGLLASAGNSLWIVDRWKAHVEAINSRGLRLEGPQRDLTAFAHASTTAPDEPMDLVIIAVKASDV ETGAQQTLSMIGPETIVLTIQNGLGSADAVAQVVGVDRLAVGIASGFGASLKGPGHAHHNAMQALRFGAYSSLPYERVVA VARVWESAGFDAKAIRDIAVMQWEKLICNVAYSAPCALTGMTVGEVMNDPCMGPVSQAAATEAWSVARALGIQIDVDDPV AHVRAFGARMPAAKPSALLDHEAGRISEIDVINGAVPTQGNKLGIATPVNSTLTQLVRVKERQFRK
Sequences:
>Translated_306_residues MKIAIVGCGAMGSVYAGLLASAGNSLWIVDRWKAHVEAINSRGLRLEGPQRDLTAFAHASTTAPDEPMDLVIIAVKASDV ETGAQQTLSMIGPETIVLTIQNGLGSADAVAQVVGVDRLAVGIASGFGASLKGPGHAHHNAMQALRFGAYSSLPYERVVA VARVWESAGFDAKAIRDIAVMQWEKLICNVAYSAPCALTGMTVGEVMNDPCMGPVSQAAATEAWSVARALGIQIDVDDPV AHVRAFGARMPAAKPSALLDHEAGRISEIDVINGAVPTQGNKLGIATPVNSTLTQLVRVKERQFRK >Mature_306_residues MKIAIVGCGAMGSVYAGLLASAGNSLWIVDRWKAHVEAINSRGLRLEGPQRDLTAFAHASTTAPDEPMDLVIIAVKASDV ETGAQQTLSMIGPETIVLTIQNGLGSADAVAQVVGVDRLAVGIASGFGASLKGPGHAHHNAMQALRFGAYSSLPYERVVA VARVWESAGFDAKAIRDIAVMQWEKLICNVAYSAPCALTGMTVGEVMNDPCMGPVSQAAATEAWSVARALGIQIDVDDPV AHVRAFGARMPAAKPSALLDHEAGRISEIDVINGAVPTQGNKLGIATPVNSTLTQLVRVKERQFRK
Specific function: Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid [H]
COG id: COG1893
COG function: function code H; Ketopantoate reductase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketopantoate reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR003710 - InterPro: IPR013752 - InterPro: IPR013332 - InterPro: IPR013328 - InterPro: IPR016040 [H]
Pfam domain/function: PF02558 ApbA; PF08546 ApbA_C [H]
EC number: =1.1.1.169 [H]
Molecular weight: Translated: 32071; Mature: 32071
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAIVGCGAMGSVYAGLLASAGNSLWIVDRWKAHVEAINSRGLRLEGPQRDLTAFAHAS CEEEEEECCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCEECCCHHHHHHHHHCC TTAPDEPMDLVIIAVKASDVETGAQQTLSMIGPETIVLTIQNGLGSADAVAQVVGVDRLA CCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHH VGIASGFGASLKGPGHAHHNAMQALRFGAYSSLPYERVVAVARVWESAGFDAKAIRDIAV HHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH MQWEKLICNVAYSAPCALTGMTVGEVMNDPCMGPVSQAAATEAWSVARALGIQIDVDDPV HHHHHHHHHHHCCCCCCEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCHH AHVRAFGARMPAAKPSALLDHEAGRISEIDVINGAVPTQGNKLGIATPVNSTLTQLVRVK HHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHH ERQFRK HHHHCC >Mature Secondary Structure MKIAIVGCGAMGSVYAGLLASAGNSLWIVDRWKAHVEAINSRGLRLEGPQRDLTAFAHAS CEEEEEECCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCEECCCHHHHHHHHHCC TTAPDEPMDLVIIAVKASDVETGAQQTLSMIGPETIVLTIQNGLGSADAVAQVVGVDRLA CCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHH VGIASGFGASLKGPGHAHHNAMQALRFGAYSSLPYERVVAVARVWESAGFDAKAIRDIAV HHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH MQWEKLICNVAYSAPCALTGMTVGEVMNDPCMGPVSQAAATEAWSVARALGIQIDVDDPV HHHHHHHHHHHCCCCCCEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCHH AHVRAFGARMPAAKPSALLDHEAGRISEIDVINGAVPTQGNKLGIATPVNSTLTQLVRVK HHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHH ERQFRK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11296296 [H]