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The map label for this gene is comL [H]

Identifier: 121611397

GI number: 121611397

Start: 4962326

End: 4963123

Strand: Direct

Name: comL [H]

Synonym: Veis_4485

Alternate gene names: 121611397

Gene position: 4962326-4963123 (Clockwise)

Preceding gene: 121611392

Following gene: 121611399

Centisome position: 89.14

GC content: 65.29

Gene sequence:

>798_bases
ATGCTGCCCGCCCCACTGCCCCTGGTTTCTGCCCTGCTGCTGGCAGCCCTGCTGGCTGCATGCTCGAGCACCACCGAAGA
CCGGACGGCGGGCTGGAGCACCGAACGCATCCGCGCCGAAGCGCAGGACGAGATGAGCAGCGGCGCCTATGACAAGGCCG
TGCCGCTGCTGGAAAAGCTCGAAGGCCGCGCTGCCGGCACGCCACTGGCGCAGCAGGCCCAGATCGACAAGGCCTATGCA
CACTACAAGTCCGGCGAAAAAGCCCAGGCCGTGGCCACGCTGGATCGCTTCATGAAGCTGCACCCCGTCAGCCCGGCGCT
GGACTATGCGCTGTACCTCAAGGGCCTGGCGAACTTCAACGACAACCTGGGCCTGTTCTCGTTCATCTCGCGCGAAGACC
TGTCCGAGCGCGACCAGCAGGCCGCCAAAGACTCCTTCGAGGCGTTCAGGGAACTCGTCAACCGCTTTCCGCAATCGCGC
TACGCGCAGGATGCACGCCAGCGCATGACCTATATCGTGAACTCGCTGGCGCAGTATGAGGTGCATGTGGCGCGCTACTA
CTACCTGCACGGCGCCTATGTGGCGGCCATCGGCCGCGCCCACTTGGCCCTGTCCGACTACCAGGGCGTTCCGGCGCAGG
AAGAGGCGCTGTACATCCTGATCCAGTCCTACGATGCGCTGGGCATGACCGCGCTGCGCGACGACGCGCGCCGGGTGATG
GACAAGTCCTACCCGCAAAGCAGCTTCATGAGCGGCGGCTTCAAGCGCCGGCAGGAGCCGTGGTGGAAGATCTGGTAG

Upstream 100 bases:

>100_bases
GGCAGCCCTGCCGGGCGCCCGCCTGCCGCCGCTACAATGCCGCGCAGGCCCGTGTTCCCGCCTGTGTTTTCCGTGTTCCA
TTTGCCGAAAGCCGCCTGCG

Downstream 100 bases:

>100_bases
CGCCGGCGGCGCAGGCAGCACCACGGGCAAGGGCCAGCAAGGCGGCCTCGAATTCGTCCTCCGATGCCAGTTTCCGCATG
GGCGGCAAGGCGGCCAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MLPAPLPLVSALLLAALLAACSSTTEDRTAGWSTERIRAEAQDEMSSGAYDKAVPLLEKLEGRAAGTPLAQQAQIDKAYA
HYKSGEKAQAVATLDRFMKLHPVSPALDYALYLKGLANFNDNLGLFSFISREDLSERDQQAAKDSFEAFRELVNRFPQSR
YAQDARQRMTYIVNSLAQYEVHVARYYYLHGAYVAAIGRAHLALSDYQGVPAQEEALYILIQSYDALGMTALRDDARRVM
DKSYPQSSFMSGGFKRRQEPWWKIW

Sequences:

>Translated_265_residues
MLPAPLPLVSALLLAALLAACSSTTEDRTAGWSTERIRAEAQDEMSSGAYDKAVPLLEKLEGRAAGTPLAQQAQIDKAYA
HYKSGEKAQAVATLDRFMKLHPVSPALDYALYLKGLANFNDNLGLFSFISREDLSERDQQAAKDSFEAFRELVNRFPQSR
YAQDARQRMTYIVNSLAQYEVHVARYYYLHGAYVAAIGRAHLALSDYQGVPAQEEALYILIQSYDALGMTALRDDARRVM
DKSYPQSSFMSGGFKRRQEPWWKIW
>Mature_265_residues
MLPAPLPLVSALLLAALLAACSSTTEDRTAGWSTERIRAEAQDEMSSGAYDKAVPLLEKLEGRAAGTPLAQQAQIDKAYA
HYKSGEKAQAVATLDRFMKLHPVSPALDYALYLKGLANFNDNLGLFSFISREDLSERDQQAAKDSFEAFRELVNRFPQSR
YAQDARQRMTYIVNSLAQYEVHVARYYYLHGAYVAAIGRAHLALSDYQGVPAQEEALYILIQSYDALGMTALRDDARRVM
DKSYPQSSFMSGGFKRRQEPWWKIW

Specific function: Required for efficient transformation of Neisseria gonorrhoeae by species-related DNA [H]

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=234, Percent_Identity=35.8974358974359, Blast_Score=144, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29776; Mature: 29776

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPAPLPLVSALLLAALLAACSSTTEDRTAGWSTERIRAEAQDEMSSGAYDKAVPLLEKL
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
EGRAAGTPLAQQAQIDKAYAHYKSGEKAQAVATLDRFMKLHPVSPALDYALYLKGLANFN
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
DNLGLFSFISREDLSERDQQAAKDSFEAFRELVNRFPQSRYAQDARQRMTYIVNSLAQYE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VHVARYYYLHGAYVAAIGRAHLALSDYQGVPAQEEALYILIQSYDALGMTALRDDARRVM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEHHEECCCHHHHHHHHHHHHHHH
DKSYPQSSFMSGGFKRRQEPWWKIW
HHCCCHHHHHCCCHHHCCCCCCCCC
>Mature Secondary Structure
MLPAPLPLVSALLLAALLAACSSTTEDRTAGWSTERIRAEAQDEMSSGAYDKAVPLLEKL
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
EGRAAGTPLAQQAQIDKAYAHYKSGEKAQAVATLDRFMKLHPVSPALDYALYLKGLANFN
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
DNLGLFSFISREDLSERDQQAAKDSFEAFRELVNRFPQSRYAQDARQRMTYIVNSLAQYE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VHVARYYYLHGAYVAAIGRAHLALSDYQGVPAQEEALYILIQSYDALGMTALRDDARRVM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEHHEECCCHHHHHHHHHHHHHHH
DKSYPQSSFMSGGFKRRQEPWWKIW
HHCCCHHHHHCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8830266 [H]