| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611387
Identifier: 121611387
GI number: 121611387
Start: 4946471
End: 4946731
Strand: Direct
Name: 121611387
Synonym: Veis_4475
Alternate gene names: NA
Gene position: 4946471-4946731 (Clockwise)
Preceding gene: 121611374
Following gene: 121611388
Centisome position: 88.86
GC content: 70.5
Gene sequence:
>261_bases GTGAGCACCGCCCGGCCGCCCGAAGGCGCTCATACCGTAGCCGAAGGCGAAGGTACCTCCGTGAGCACCGCCACCGTCAA CCCGGACGACAAATACACGCTGCGCCAGGGGCGCATCTTCATTACCGGGACGCAGGCGCTGGTCCGGTTGCCGATGACGC AGCAGCAGCGCGAGCGCCGCGCAGGGCGCGACACGGCGAGCGCGTGCGCACGGCCGAACGGCAAAAATCTTCCCGGGGCG CAGCGCGCCCACTCGCGCTGA
Upstream 100 bases:
>100_bases GCACAATATTGGTCAATGCCCGCACCAGGTCGAAGCAGGAAGCGCCGCCGTGTTGCGTGCTGCCCGCTGCGTCTCACCTG TGCCACGATGAAGGCGCCCC
Downstream 100 bases:
>100_bases CCTCATTGCCCGCGCGAGCGGGCGCAGGAACTGCTGGCCCGTTCGACGCCGGCCGCCTGAACGCAGCGGCCGACGGAACT CCGGCCTTGGCACTCGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MSTARPPEGAHTVAEGEGTSVSTATVNPDDKYTLRQGRIFITGTQALVRLPMTQQQRERRAGRDTASACARPNGKNLPGA QRAHSR
Sequences:
>Translated_86_residues MSTARPPEGAHTVAEGEGTSVSTATVNPDDKYTLRQGRIFITGTQALVRLPMTQQQRERRAGRDTASACARPNGKNLPGA QRAHSR >Mature_85_residues STARPPEGAHTVAEGEGTSVSTATVNPDDKYTLRQGRIFITGTQALVRLPMTQQQRERRAGRDTASACARPNGKNLPGAQ RAHSR
Specific function: Unknown
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9258; Mature: 9127
Theoretical pI: Translated: 11.62; Mature: 11.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTARPPEGAHTVAEGEGTSVSTATVNPDDKYTLRQGRIFITGTQALVRLPMTQQQRERR CCCCCCCCCCCEEECCCCCEEEEEEECCCCCEEECCCEEEEEECHHEEECCCCHHHHHHH AGRDTASACARPNGKNLPGAQRAHSR CCCCCHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure STARPPEGAHTVAEGEGTSVSTATVNPDDKYTLRQGRIFITGTQALVRLPMTQQQRERR CCCCCCCCCCEEECCCCCEEEEEEECCCCCEEECCCEEEEEECHHEEECCCCHHHHHHH AGRDTASACARPNGKNLPGAQRAHSR CCCCCHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA