| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is yufQ [H]
Identifier: 121611343
GI number: 121611343
Start: 4879687
End: 4880604
Strand: Direct
Name: yufQ [H]
Synonym: Veis_4429
Alternate gene names: 121611343
Gene position: 4879687-4880604 (Clockwise)
Preceding gene: 121611342
Following gene: 121611344
Centisome position: 87.66
GC content: 69.06
Gene sequence:
>918_bases ATGACCGAACTGCTCGACATCTTGCTCAACCCGTCCTTCTGGGGCGCCACGCTGCGCCTGGCCACGCCGCTGATCCTGGG CACCCTGGGCGTGCTGCTGTGCGAGCGCGCCGGGGTGCTGCACCTGGGCGTGGAAGGCATCATGGTGGCCGGGGCCTATA CCGGCTGGCTCACGGTGTATGCCGGCCATGGCCTGTGGTCGGGGGTGCTGGCGGCGGCGCTGACGGGCGCGCTGTTCGGG CTGCTGCATGCCTGGCTGACCGTCGGGCTGGCGCTGGCGCAGCATGTCTCGGGCCTGGGCATCACGCTGCTGGCCACGGC GCTGAGTTACTACGGCTACCGCGTCGGCTTTGCCCAGGTGCAGACGCCGCCGACCATCGAGCCTTTTGCGCCGATGCAAT GGCTGGGCATCCCGATCATCTCGACGCAAACCCCGCTGACGCTGCTGGCGCTGCTGCTGGTGCCCGGCCTGGCCTGGGTG CTGATGCGCACGCCGCTGGGCCTGGCCCTGCGCATGGTGGGCGAGAACCCGCAGGCGGCCGAAGGCCAGGGCATCCCGGT GGCGCCGCTGCGCACCGGCGCCATCGTCGCCGGCTCGGCGCTGATGGGCGTGGCGGGGGCCTTTCTGACGCTGTCGGCGT TCAATGCCTTCTTCTTTCATATGGTCAACGGGCGCGGCTGGATCTGCGTGGCGCTGGTGGTGTTTGCCTCCTGGCGGCCC GGCAAGGCCCTGCTGGGCGCCCTGCTGTTCGCCTTTTTCGATGCGCTGCAACTGCGGCTGCAACAGGCCGGCGCTGTCTG GCTGCCGTACCAGTTGTATCTGATGCTGCCCTATCTGCTGTCCATCCTGGCGCTGGTGCTGGTGGCGCGCAAGGCGGCGT ATCCGCAGGCGCTGATGCAGCCTTACCGCAAGGAATGA
Upstream 100 bases:
>100_bases GCCGACCTATATCGCCGACGTGATCGTCGCCACCGCGCTGCTGGCCGTGCTGGTGGCCAGGCTGCTGACACAGTACCGGG TGCGCTGGCGCTGACGCCCG
Downstream 100 bases:
>100_bases CGGCGCGCCTTCATTCACCCCCTTCACCTTCACCCCCCCATTCGCCCCATTCGCCCCCTGCCGGCAGCGCGGCCCTGGCG CACGCACAGCGCCAGCGCAG
Product: inner-membrane translocator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTELLDILLNPSFWGATLRLATPLILGTLGVLLCERAGVLHLGVEGIMVAGAYTGWLTVYAGHGLWSGVLAAALTGALFG LLHAWLTVGLALAQHVSGLGITLLATALSYYGYRVGFAQVQTPPTIEPFAPMQWLGIPIISTQTPLTLLALLLVPGLAWV LMRTPLGLALRMVGENPQAAEGQGIPVAPLRTGAIVAGSALMGVAGAFLTLSAFNAFFFHMVNGRGWICVALVVFASWRP GKALLGALLFAFFDALQLRLQQAGAVWLPYQLYLMLPYLLSILALVLVARKAAYPQALMQPYRKE
Sequences:
>Translated_305_residues MTELLDILLNPSFWGATLRLATPLILGTLGVLLCERAGVLHLGVEGIMVAGAYTGWLTVYAGHGLWSGVLAAALTGALFG LLHAWLTVGLALAQHVSGLGITLLATALSYYGYRVGFAQVQTPPTIEPFAPMQWLGIPIISTQTPLTLLALLLVPGLAWV LMRTPLGLALRMVGENPQAAEGQGIPVAPLRTGAIVAGSALMGVAGAFLTLSAFNAFFFHMVNGRGWICVALVVFASWRP GKALLGALLFAFFDALQLRLQQAGAVWLPYQLYLMLPYLLSILALVLVARKAAYPQALMQPYRKE >Mature_304_residues TELLDILLNPSFWGATLRLATPLILGTLGVLLCERAGVLHLGVEGIMVAGAYTGWLTVYAGHGLWSGVLAAALTGALFGL LHAWLTVGLALAQHVSGLGITLLATALSYYGYRVGFAQVQTPPTIEPFAPMQWLGIPIISTQTPLTLLALLLVPGLAWVL MRTPLGLALRMVGENPQAAEGQGIPVAPLRTGAIVAGSALMGVAGAFLTLSAFNAFFFHMVNGRGWICVALVVFASWRPG KALLGALLFAFFDALQLRLQQAGAVWLPYQLYLMLPYLLSILALVLVARKAAYPQALMQPYRKE
Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG1079
COG function: function code R; Uncharacterized ABC-type transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 32502; Mature: 32371
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELLDILLNPSFWGATLRLATPLILGTLGVLLCERAGVLHLGVEGIMVAGAYTGWLTVY CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECHHHHHHHEE AGHGLWSGVLAAALTGALFGLLHAWLTVGLALAQHVSGLGITLLATALSYYGYRVGFAQV ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEE QTPPTIEPFAPMQWLGIPIISTQTPLTLLALLLVPGLAWVLMRTPLGLALRMVGENPQAA CCCCCCCCCCCHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC EGQGIPVAPLRTGAIVAGSALMGVAGAFLTLSAFNAFFFHMVNGRGWICVALVVFASWRP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC GKALLGALLFAFFDALQLRLQQAGAVWLPYQLYLMLPYLLSILALVLVARKAAYPQALMQ HHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH PYRKE HHCCC >Mature Secondary Structure TELLDILLNPSFWGATLRLATPLILGTLGVLLCERAGVLHLGVEGIMVAGAYTGWLTVY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECHHHHHHHEE AGHGLWSGVLAAALTGALFGLLHAWLTVGLALAQHVSGLGITLLATALSYYGYRVGFAQV ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEE QTPPTIEPFAPMQWLGIPIISTQTPLTLLALLLVPGLAWVLMRTPLGLALRMVGENPQAA CCCCCCCCCCCHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC EGQGIPVAPLRTGAIVAGSALMGVAGAFLTLSAFNAFFFHMVNGRGWICVALVVFASWRP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC GKALLGALLFAFFDALQLRLQQAGAVWLPYQLYLMLPYLLSILALVLVARKAAYPQALMQ HHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH PYRKE HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]