Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is yufQ [H]

Identifier: 121611343

GI number: 121611343

Start: 4879687

End: 4880604

Strand: Direct

Name: yufQ [H]

Synonym: Veis_4429

Alternate gene names: 121611343

Gene position: 4879687-4880604 (Clockwise)

Preceding gene: 121611342

Following gene: 121611344

Centisome position: 87.66

GC content: 69.06

Gene sequence:

>918_bases
ATGACCGAACTGCTCGACATCTTGCTCAACCCGTCCTTCTGGGGCGCCACGCTGCGCCTGGCCACGCCGCTGATCCTGGG
CACCCTGGGCGTGCTGCTGTGCGAGCGCGCCGGGGTGCTGCACCTGGGCGTGGAAGGCATCATGGTGGCCGGGGCCTATA
CCGGCTGGCTCACGGTGTATGCCGGCCATGGCCTGTGGTCGGGGGTGCTGGCGGCGGCGCTGACGGGCGCGCTGTTCGGG
CTGCTGCATGCCTGGCTGACCGTCGGGCTGGCGCTGGCGCAGCATGTCTCGGGCCTGGGCATCACGCTGCTGGCCACGGC
GCTGAGTTACTACGGCTACCGCGTCGGCTTTGCCCAGGTGCAGACGCCGCCGACCATCGAGCCTTTTGCGCCGATGCAAT
GGCTGGGCATCCCGATCATCTCGACGCAAACCCCGCTGACGCTGCTGGCGCTGCTGCTGGTGCCCGGCCTGGCCTGGGTG
CTGATGCGCACGCCGCTGGGCCTGGCCCTGCGCATGGTGGGCGAGAACCCGCAGGCGGCCGAAGGCCAGGGCATCCCGGT
GGCGCCGCTGCGCACCGGCGCCATCGTCGCCGGCTCGGCGCTGATGGGCGTGGCGGGGGCCTTTCTGACGCTGTCGGCGT
TCAATGCCTTCTTCTTTCATATGGTCAACGGGCGCGGCTGGATCTGCGTGGCGCTGGTGGTGTTTGCCTCCTGGCGGCCC
GGCAAGGCCCTGCTGGGCGCCCTGCTGTTCGCCTTTTTCGATGCGCTGCAACTGCGGCTGCAACAGGCCGGCGCTGTCTG
GCTGCCGTACCAGTTGTATCTGATGCTGCCCTATCTGCTGTCCATCCTGGCGCTGGTGCTGGTGGCGCGCAAGGCGGCGT
ATCCGCAGGCGCTGATGCAGCCTTACCGCAAGGAATGA

Upstream 100 bases:

>100_bases
GCCGACCTATATCGCCGACGTGATCGTCGCCACCGCGCTGCTGGCCGTGCTGGTGGCCAGGCTGCTGACACAGTACCGGG
TGCGCTGGCGCTGACGCCCG

Downstream 100 bases:

>100_bases
CGGCGCGCCTTCATTCACCCCCTTCACCTTCACCCCCCCATTCGCCCCATTCGCCCCCTGCCGGCAGCGCGGCCCTGGCG
CACGCACAGCGCCAGCGCAG

Product: inner-membrane translocator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTELLDILLNPSFWGATLRLATPLILGTLGVLLCERAGVLHLGVEGIMVAGAYTGWLTVYAGHGLWSGVLAAALTGALFG
LLHAWLTVGLALAQHVSGLGITLLATALSYYGYRVGFAQVQTPPTIEPFAPMQWLGIPIISTQTPLTLLALLLVPGLAWV
LMRTPLGLALRMVGENPQAAEGQGIPVAPLRTGAIVAGSALMGVAGAFLTLSAFNAFFFHMVNGRGWICVALVVFASWRP
GKALLGALLFAFFDALQLRLQQAGAVWLPYQLYLMLPYLLSILALVLVARKAAYPQALMQPYRKE

Sequences:

>Translated_305_residues
MTELLDILLNPSFWGATLRLATPLILGTLGVLLCERAGVLHLGVEGIMVAGAYTGWLTVYAGHGLWSGVLAAALTGALFG
LLHAWLTVGLALAQHVSGLGITLLATALSYYGYRVGFAQVQTPPTIEPFAPMQWLGIPIISTQTPLTLLALLLVPGLAWV
LMRTPLGLALRMVGENPQAAEGQGIPVAPLRTGAIVAGSALMGVAGAFLTLSAFNAFFFHMVNGRGWICVALVVFASWRP
GKALLGALLFAFFDALQLRLQQAGAVWLPYQLYLMLPYLLSILALVLVARKAAYPQALMQPYRKE
>Mature_304_residues
TELLDILLNPSFWGATLRLATPLILGTLGVLLCERAGVLHLGVEGIMVAGAYTGWLTVYAGHGLWSGVLAAALTGALFGL
LHAWLTVGLALAQHVSGLGITLLATALSYYGYRVGFAQVQTPPTIEPFAPMQWLGIPIISTQTPLTLLALLLVPGLAWVL
MRTPLGLALRMVGENPQAAEGQGIPVAPLRTGAIVAGSALMGVAGAFLTLSAFNAFFFHMVNGRGWICVALVVFASWRPG
KALLGALLFAFFDALQLRLQQAGAVWLPYQLYLMLPYLLSILALVLVARKAAYPQALMQPYRKE

Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG1079

COG function: function code R; Uncharacterized ABC-type transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32502; Mature: 32371

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELLDILLNPSFWGATLRLATPLILGTLGVLLCERAGVLHLGVEGIMVAGAYTGWLTVY
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECHHHHHHHEE
AGHGLWSGVLAAALTGALFGLLHAWLTVGLALAQHVSGLGITLLATALSYYGYRVGFAQV
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEE
QTPPTIEPFAPMQWLGIPIISTQTPLTLLALLLVPGLAWVLMRTPLGLALRMVGENPQAA
CCCCCCCCCCCHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC
EGQGIPVAPLRTGAIVAGSALMGVAGAFLTLSAFNAFFFHMVNGRGWICVALVVFASWRP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
GKALLGALLFAFFDALQLRLQQAGAVWLPYQLYLMLPYLLSILALVLVARKAAYPQALMQ
HHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
PYRKE
HHCCC
>Mature Secondary Structure 
TELLDILLNPSFWGATLRLATPLILGTLGVLLCERAGVLHLGVEGIMVAGAYTGWLTVY
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECHHHHHHHEE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HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]