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The map label for this gene is dppC [H]

Identifier: 121611207

GI number: 121611207

Start: 4735334

End: 4736239

Strand: Direct

Name: dppC [H]

Synonym: Veis_4292

Alternate gene names: 121611207

Gene position: 4735334-4736239 (Clockwise)

Preceding gene: 121611206

Following gene: 121611208

Centisome position: 85.06

GC content: 69.09

Gene sequence:

>906_bases
ATGAGCGCAGCCCGGCCGCCCGAAGGCGCTCATACCGCAGCGCTGCCTGCCCCCGTCGTCCATGTCGAGCACCCGGGCGT
CGAGGCGTTGCGCATGTTCCTGCGCAACCCTTCGGCCATCGCCGGCAGTGCGCTGCTGCTCGTGGTGCTGCTGGTCGCAA
TCGCCGGGCCGTGGTTGCTGCAGGCCGACCCCTTCGAGATCAGGGCGGCCCCGCTGACGCCGCCCTTTACCGGGCAGGCC
TGGATCGGCACCGACTATCTGGGCCGCGATGTGCTGACCACGCTGGTCTACGGCGGGCGCGCCACGCTGCTGGTGGGCGC
GGTGGCCGCCGCGTTGTCGGTGCTCACCGGCATCACGCTCGGCGCTTGCGCGGGCTACTACGGCGGCAAGCTCGATGCGG
CGCTGATGAAGGTCACCGAATTCTTCCAGGTGCTGCCCGCGCTGCTGTTTGCGATGGTGGTGGTGACGCTGTTCTCGCCC
ACGCTGGTGACGGTGACGCTGGCCATAGGCTGCGTCAGTTGGACCGGCACCGCGCGCCTGACGCGCGCCGAGTTCATGAA
GTACCGGGAACTGGAATTCGTGCGCGCCGAGCGGGCCATGGGCGCGCGCGACGCGCGCATCATCTGGCAGGTGATCTTGC
CCAATGCGCTGCCGCCGCTGGTGGTCTCGGCCACGCTGGCCGTGGGGGTGGCGATCCTGTTCGAGGCCGGGCTGTCGTTC
CTGGGCCTGGGCGATCCGAACCAGATGAGTTGGGGGCTGATGATAGGTTCGAGCCGGCAGTACGTGCTGTCTTGCTGGTG
GGCCGTGGCCTTCCCGGGCGCTGCGATCTTCGTCACGGTGCTGGCCGTCAGCCTGATCGGCGACGGCCTGAACGATGCGC
TGAACCCCAAGCTGAGGGAGCGCTGA

Upstream 100 bases:

>100_bases
CCATCCTGGGCGTGCTGCTGTTCTCCTCCATCGTGGTGGTGGCGATGAACCAGATCACCGATCTGTGCTACCGCCTCATC
GACCCGCGGATCAAGGCACC

Downstream 100 bases:

>100_bases
TGAGCACCGACGCACTCTTGCGCGTGCAGGACCTGCACGTCGAATTCAACACCCGGCGCGGCCAGGCGCTGGTGCTCGGC
GGCGTGGACTTCGAGATCCG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSAARPPEGAHTAALPAPVVHVEHPGVEALRMFLRNPSAIAGSALLLVVLLVAIAGPWLLQADPFEIRAAPLTPPFTGQA
WIGTDYLGRDVLTTLVYGGRATLLVGAVAAALSVLTGITLGACAGYYGGKLDAALMKVTEFFQVLPALLFAMVVVTLFSP
TLVTVTLAIGCVSWTGTARLTRAEFMKYRELEFVRAERAMGARDARIIWQVILPNALPPLVVSATLAVGVAILFEAGLSF
LGLGDPNQMSWGLMIGSSRQYVLSCWWAVAFPGAAIFVTVLAVSLIGDGLNDALNPKLRER

Sequences:

>Translated_301_residues
MSAARPPEGAHTAALPAPVVHVEHPGVEALRMFLRNPSAIAGSALLLVVLLVAIAGPWLLQADPFEIRAAPLTPPFTGQA
WIGTDYLGRDVLTTLVYGGRATLLVGAVAAALSVLTGITLGACAGYYGGKLDAALMKVTEFFQVLPALLFAMVVVTLFSP
TLVTVTLAIGCVSWTGTARLTRAEFMKYRELEFVRAERAMGARDARIIWQVILPNALPPLVVSATLAVGVAILFEAGLSF
LGLGDPNQMSWGLMIGSSRQYVLSCWWAVAFPGAAIFVTVLAVSLIGDGLNDALNPKLRER
>Mature_300_residues
SAARPPEGAHTAALPAPVVHVEHPGVEALRMFLRNPSAIAGSALLLVVLLVAIAGPWLLQADPFEIRAAPLTPPFTGQAW
IGTDYLGRDVLTTLVYGGRATLLVGAVAAALSVLTGITLGACAGYYGGKLDAALMKVTEFFQVLPALLFAMVVVTLFSPT
LVTVTLAIGCVSWTGTARLTRAEFMKYRELEFVRAERAMGARDARIIWQVILPNALPPLVVSATLAVGVAILFEAGLSFL
GLGDPNQMSWGLMIGSSRQYVLSCWWAVAFPGAAIFVTVLAVSLIGDGLNDALNPKLRER

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=282, Percent_Identity=35.8156028368794, Blast_Score=177, Evalue=6e-46,
Organism=Escherichia coli, GI1789964, Length=287, Percent_Identity=41.8118466898955, Blast_Score=164, Evalue=8e-42,
Organism=Escherichia coli, GI1787054, Length=283, Percent_Identity=32.8621908127208, Blast_Score=150, Evalue=8e-38,
Organism=Escherichia coli, GI1787498, Length=275, Percent_Identity=35.6363636363636, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1789889, Length=244, Percent_Identity=35.2459016393443, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI1788505, Length=233, Percent_Identity=30.9012875536481, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787549, Length=298, Percent_Identity=32.2147651006711, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31837; Mature: 31706

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAARPPEGAHTAALPAPVVHVEHPGVEALRMFLRNPSAIAGSALLLVVLLVAIAGPWLL
CCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEE
QADPFEIRAAPLTPPFTGQAWIGTDYLGRDVLTTLVYGGRATLLVGAVAAALSVLTGITL
CCCCCEEEECCCCCCCCCCCEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GACAGYYGGKLDAALMKVTEFFQVLPALLFAMVVVTLFSPTLVTVTLAIGCVSWTGTARL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHH
TRAEFMKYRELEFVRAERAMGARDARIIWQVILPNALPPLVVSATLAVGVAILFEAGLSF
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHE
LGLGDPNQMSWGLMIGSSRQYVLSCWWAVAFPGAAIFVTVLAVSLIGDGLNDALNPKLRE
EECCCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHCCCHHCC
R
C
>Mature Secondary Structure 
SAARPPEGAHTAALPAPVVHVEHPGVEALRMFLRNPSAIAGSALLLVVLLVAIAGPWLL
CCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEE
QADPFEIRAAPLTPPFTGQAWIGTDYLGRDVLTTLVYGGRATLLVGAVAAALSVLTGITL
CCCCCEEEECCCCCCCCCCCEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GACAGYYGGKLDAALMKVTEFFQVLPALLFAMVVVTLFSPTLVTVTLAIGCVSWTGTARL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHH
TRAEFMKYRELEFVRAERAMGARDARIIWQVILPNALPPLVVSATLAVGVAILFEAGLSF
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHE
LGLGDPNQMSWGLMIGSSRQYVLSCWWAVAFPGAAIFVTVLAVSLIGDGLNDALNPKLRE
EECCCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHCCCHHCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]