Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611187

Identifier: 121611187

GI number: 121611187

Start: 4711166

End: 4712185

Strand: Direct

Name: 121611187

Synonym: Veis_4271

Alternate gene names: NA

Gene position: 4711166-4712185 (Clockwise)

Preceding gene: 121611177

Following gene: 121611188

Centisome position: 84.63

GC content: 65.88

Gene sequence:

>1020_bases
ATGGCCGACACTCGCGGGCATTGCGAATCGAAGGAGTCCCGCGTGCCTTACGAGCCCATCCGGATCCGGCGCCAGTGGCT
GGCAGCCGTCATGCTGCTGGCGGCGGGCAGTGCCGCACAGACCCAGGACTTCCCCAACCGGCCGATCCGCCTGATTGCCC
CGTTTGCGGCCGGCGCCAGCACCGACTTCCTGGCGCGCACGATCGCGCAAACCATGTCCAGAAACCTGGGGCAACCCGTG
GTGGTGGACAACAAGCCCGGCGCCGGCGGCATCCTGGCCGCCGAGCAGACGGCGCGCGCCGCGCCGGACGGTTACACCTT
CATGCTGACGTCCGCCGGCATCGTCACGATGAACCAAAGCATCTACAGCCAGTTGCCCTACGACCCGATCAAGGAATTCG
CGCCGCTCACGATCGCCGTGCGCATGCCGATCGTCGTCGTGGTGCACCCGTCGCTGCCGGTCAAGAGCGTGCCGGAGTTG
CTCGCCTATGCGCATGCCCACCCCGGCAAGCTCTCCTACGGATCGTCCGGGGTCGGCACCTCACAGCACCTGGCGGGCGA
GTTGTTCAAGTCGATGACCAAGGCCAGCATCCTGCACATCCCCTACCGGGGCGGCGGCCCGGCGATGAATGACCTGTTGG
CCAACCAGATCGGCCTGATGTTCGTGCAACTACCGTCGGCTCTGCCGCAGATTCAGGCGGGCAAGGTGCGCGCCATAGCC
ATCGGCAGCGAGCAGCGCGACCCGAAATTGCCGGCTGTCCCGACGGTGTCCGAGTCGGGCCTGAAGGGCTACAACTCGGA
CACCTGGTACGGCTTCGTGATGCCCACGGGAGCGCCACCGGCCATCGTGCAAACGCTGTACCAGGCCATCATCGCTGCGC
TGAAGGAAAACGCGCAGCGGCTGTCCGGGCATGGCTTCAATGTCGATGGCGGCAACCCGCAACAGATGGCCGACACGATA
GCGACCGAGGCCAAAAAATGGGCGCTCGTGATCAAGGCCGCCGACATCAGGGCTGATTGA

Upstream 100 bases:

>100_bases
ACGGGCATCTATCAGTGCACGAAAGCAGTATTTTCGTACTGTCATCAATATCAACATATGGACTATTTTTTGACCATTCC
CTGCGCATCCCGGAAGCGGC

Downstream 100 bases:

>100_bases
TGTGCAACACCCCCGAGGCGCCTTCGGCGCGCGCCGGGTTGGAGGCCGCGCCATGCACGAGCAAACCATGCGCCGCAAGG
GCTTTCTGCTGCGCGCACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MADTRGHCESKESRVPYEPIRIRRQWLAAVMLLAAGSAAQTQDFPNRPIRLIAPFAAGASTDFLARTIAQTMSRNLGQPV
VVDNKPGAGGILAAEQTARAAPDGYTFMLTSAGIVTMNQSIYSQLPYDPIKEFAPLTIAVRMPIVVVVHPSLPVKSVPEL
LAYAHAHPGKLSYGSSGVGTSQHLAGELFKSMTKASILHIPYRGGGPAMNDLLANQIGLMFVQLPSALPQIQAGKVRAIA
IGSEQRDPKLPAVPTVSESGLKGYNSDTWYGFVMPTGAPPAIVQTLYQAIIAALKENAQRLSGHGFNVDGGNPQQMADTI
ATEAKKWALVIKAADIRAD

Sequences:

>Translated_339_residues
MADTRGHCESKESRVPYEPIRIRRQWLAAVMLLAAGSAAQTQDFPNRPIRLIAPFAAGASTDFLARTIAQTMSRNLGQPV
VVDNKPGAGGILAAEQTARAAPDGYTFMLTSAGIVTMNQSIYSQLPYDPIKEFAPLTIAVRMPIVVVVHPSLPVKSVPEL
LAYAHAHPGKLSYGSSGVGTSQHLAGELFKSMTKASILHIPYRGGGPAMNDLLANQIGLMFVQLPSALPQIQAGKVRAIA
IGSEQRDPKLPAVPTVSESGLKGYNSDTWYGFVMPTGAPPAIVQTLYQAIIAALKENAQRLSGHGFNVDGGNPQQMADTI
ATEAKKWALVIKAADIRAD
>Mature_338_residues
ADTRGHCESKESRVPYEPIRIRRQWLAAVMLLAAGSAAQTQDFPNRPIRLIAPFAAGASTDFLARTIAQTMSRNLGQPVV
VDNKPGAGGILAAEQTARAAPDGYTFMLTSAGIVTMNQSIYSQLPYDPIKEFAPLTIAVRMPIVVVVHPSLPVKSVPELL
AYAHAHPGKLSYGSSGVGTSQHLAGELFKSMTKASILHIPYRGGGPAMNDLLANQIGLMFVQLPSALPQIQAGKVRAIAI
GSEQRDPKLPAVPTVSESGLKGYNSDTWYGFVMPTGAPPAIVQTLYQAIIAALKENAQRLSGHGFNVDGGNPQQMADTIA
TEAKKWALVIKAADIRAD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 36073; Mature: 35942

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTRGHCESKESRVPYEPIRIRRQWLAAVMLLAAGSAAQTQDFPNRPIRLIAPFAAGAS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCEEEEEECCCCCC
TDFLARTIAQTMSRNLGQPVVVDNKPGAGGILAAEQTARAAPDGYTFMLTSAGIVTMNQS
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEECHHHHCCCCCCEEEEEECCCEEEECHH
IYSQLPYDPIKEFAPLTIAVRMPIVVVVHPSLPVKSVPELLAYAHAHPGKLSYGSSGVGT
HHHHCCCCHHHHHCCEEEEEECCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
SQHLAGELFKSMTKASILHIPYRGGGPAMNDLLANQIGLMFVQLPSALPQIQAGKVRAIA
HHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHEEHHHHHCCCCCCCCEEEEE
IGSEQRDPKLPAVPTVSESGLKGYNSDTWYGFVMPTGAPPAIVQTLYQAIIAALKENAQR
ECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LSGHGFNVDGGNPQQMADTIATEAKKWALVIKAADIRAD
HCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCC
>Mature Secondary Structure 
ADTRGHCESKESRVPYEPIRIRRQWLAAVMLLAAGSAAQTQDFPNRPIRLIAPFAAGAS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCEEEEEECCCCCC
TDFLARTIAQTMSRNLGQPVVVDNKPGAGGILAAEQTARAAPDGYTFMLTSAGIVTMNQS
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEECHHHHCCCCCCEEEEEECCCEEEECHH
IYSQLPYDPIKEFAPLTIAVRMPIVVVVHPSLPVKSVPELLAYAHAHPGKLSYGSSGVGT
HHHHCCCCHHHHHCCEEEEEECCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
SQHLAGELFKSMTKASILHIPYRGGGPAMNDLLANQIGLMFVQLPSALPQIQAGKVRAIA
HHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHEEHHHHHCCCCCCCCEEEEE
IGSEQRDPKLPAVPTVSESGLKGYNSDTWYGFVMPTGAPPAIVQTLYQAIIAALKENAQR
ECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LSGHGFNVDGGNPQQMADTIATEAKKWALVIKAADIRAD
HCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]