| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611166
Identifier: 121611166
GI number: 121611166
Start: 4688444
End: 4688728
Strand: Direct
Name: 121611166
Synonym: Veis_4250
Alternate gene names: NA
Gene position: 4688444-4688728 (Clockwise)
Preceding gene: 121611165
Following gene: 121611172
Centisome position: 84.22
GC content: 58.95
Gene sequence:
>285_bases ATGACACGCGCTCGAGCCACTTTCACGGTCCAAATCGATAACGATCGCGTAAAGGTGACGCAGTGGCGCTTTGCGCCCGG TGCCGAAACCGGCTGGCACCGCCACGCAATGGACTATGTGGTGGTGCCGATGACCACCGGCACGCTGCTGCTGGAAACGC CGCAGGGAGAATTTGAAAGCCCGCTGCAAGCGGGCGTTTCCTACATGCGGCCCACCGGCGTGGAACACAATGTGGTCAAC GCCAATGCGCATGAATTCGTGTTCGTTGAGATCGAACTGAAGTAG
Upstream 100 bases:
>100_bases CACGGGCGAACTGGTGGGCGAAGGATCGCGCCATGGGCCGGAAATTCATCTCGAACCCAGGTACCTCTGCCAGCACGATT GCCATCGAGGAGCAGCACCC
Downstream 100 bases:
>100_bases CGCCTCCCGCGCCTAGTGTCGCGTCACCGATCAGATGTCGTAGGCTGCGCGCAGCCATCGGAGCGCAGCGCAAGGCGCAG CGCGCAGCTAATACCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Barrel; Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Cupin Domain-Containing; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Conserved Barrel
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MTRARATFTVQIDNDRVKVTQWRFAPGAETGWHRHAMDYVVVPMTTGTLLLETPQGEFESPLQAGVSYMRPTGVEHNVVN ANAHEFVFVEIELK
Sequences:
>Translated_94_residues MTRARATFTVQIDNDRVKVTQWRFAPGAETGWHRHAMDYVVVPMTTGTLLLETPQGEFESPLQAGVSYMRPTGVEHNVVN ANAHEFVFVEIELK >Mature_93_residues TRARATFTVQIDNDRVKVTQWRFAPGAETGWHRHAMDYVVVPMTTGTLLLETPQGEFESPLQAGVSYMRPTGVEHNVVNA NAHEFVFVEIELK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10630; Mature: 10499
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRARATFTVQIDNDRVKVTQWRFAPGAETGWHRHAMDYVVVPMTTGTLLLETPQGEFES CCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCC PLQAGVSYMRPTGVEHNVVNANAHEFVFVEIELK HHHCCHHHCCCCCCCCCEEECCCCEEEEEEEEEC >Mature Secondary Structure TRARATFTVQIDNDRVKVTQWRFAPGAETGWHRHAMDYVVVPMTTGTLLLETPQGEFES CCCCEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCC PLQAGVSYMRPTGVEHNVVNANAHEFVFVEIELK HHHCCHHHCCCCCCCCCEEECCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA