| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is zwf [H]
Identifier: 121611139
GI number: 121611139
Start: 4653142
End: 4654596
Strand: Direct
Name: zwf [H]
Synonym: Veis_4223
Alternate gene names: 121611139
Gene position: 4653142-4654596 (Clockwise)
Preceding gene: 121611136
Following gene: 121611141
Centisome position: 83.59
GC content: 66.05
Gene sequence:
>1455_bases ATGAGTTTCGACCTCGTCCTGTTCGGCGGCACCGGCGACCTCGCCTGGCGCAAGCTCATGCCGGCATTGTTTCAGGCTTT CCGGCATCGCACACTGCCCGAGGGCGGGCGGATCATTGCCGTGGCGCGCGACGATCTGAGCGACGAACAATACCGCAGCC GGATAAAGTCGCGCTTCGACTGCGTGGAGTTGGCCAAGCGCCCCACGCCCGACGAGTTCGCCCGCTTTGCGGCCTTGCTG CATTACCTGCGCATGGACCTGTCCCAAACGCAGGACTACCAGCGCCTGGCACAGACCTTGAACGCGCGCGCTGCCGATTC GGTGGTGATGTATGTGGCCACCGCGCCCAGCCTGTTCACCAATGTGTGCGAGCAGATCGCGGCCGTCGGCCTGAACGGCC CCGGCACCCGCGTGGTGCTGGAAAAACCCCTGGGCCACGACCTGCGCTCGAACCGGGCCATCAACGACAGCCTGCGCCGC GTGCTGCGCGAAGAGCAGGTTTTCCGCATCGACCATTACCTGGGCAAGCCCTCGGTGCAGAACCTGTTTGCGCTGCGCTT TGGCAATGCGCTGTTCGAGCCCCTGTGGCGGCGTGAAACCATTGCCAACATCCAGATCACCATCGCCGAAGAACTGGGCG TGGAAACGCGCGGTGCGTTCTACGACCAGACCGGCGCGCTGCGCGACATGGTGCAAAACCATGCGCTGCAATTGCTGTGC GCGATCGGCATGGAGCCACCGATCAACTCCGGCGCCAACGCCATCCGCGACGAGAAGCTCAAGGTGCTGCAATCGCTCAA GCCCTGGACTGCCGACACCATCGGCCAGCATGTGATCCGCGGGCAATACGCCGCAGGCAACACGCAAGGCCAGGCCATGC CGGGCTATTTGCAGGAAAAAGGCGTGGCGCCGGGCAGCAACACCGAGACCTTCGTCGCGCTGCGCACCGAGATCTCGAAC TGGCGCTGGGCCGGCGTGCCGTTTTACATTCGCACCGGCAAGCGGCTGGCGGGGCGCGATGCGCATATCGTCGTCAACTT TCACCCGGTGCCCCACCCCATCTTCAGAACCCCTGCGGGCGTGGCCAACCGGCTGGTGATCCACCTGCAGCCCAAGGACG GGCTGGAGCTGCATCTGCTGGCCCAGGGCGCGGCGCAGCACCAGAGCGAGCCTGCGCTGTCGCAGGTGCACCTGAACCTG GACTTCGAGCAGCGCTTTGGCACCGAGCGCGTGGGCGCCTACGAGCGCCTGCTGCTCGACGTGATTGCCGGCCGGCTGAA CCTGTTCGTGCGCAGCGACGAGCAGCAAGAGGCCTGGCGCTGGGTGGAGCCGATACTGCAGCACTGGCAGGACGACCCGG TCGGGCCACGACCTTATGCGGCCGGCAGTTGGGGCCCGAGCGCGGCCAGCGCGATGATCGCCCGCGACGGCTACTGCTGG AGCGAGGAGGTCTGA
Upstream 100 bases:
>100_bases CGCTCCGATGGCTGCGCGCAGCCTACGACATCTGATCCGTGACACGACACTAGGGCATGTAACGTGATTACAATTTCGCA GCACTCTCGACGGAGATACC
Downstream 100 bases:
>100_bases GCCTGGCTGCGACCGGCGCGCCAGGCACCGAAGATGGCGATCAGGCCGGGGATGAAAACGATGGCCCAGATGATCTTGTC CAGGTTCTCCCGGACCCAGG
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MSFDLVLFGGTGDLAWRKLMPALFQAFRHRTLPEGGRIIAVARDDLSDEQYRSRIKSRFDCVELAKRPTPDEFARFAALL HYLRMDLSQTQDYQRLAQTLNARAADSVVMYVATAPSLFTNVCEQIAAVGLNGPGTRVVLEKPLGHDLRSNRAINDSLRR VLREEQVFRIDHYLGKPSVQNLFALRFGNALFEPLWRRETIANIQITIAEELGVETRGAFYDQTGALRDMVQNHALQLLC AIGMEPPINSGANAIRDEKLKVLQSLKPWTADTIGQHVIRGQYAAGNTQGQAMPGYLQEKGVAPGSNTETFVALRTEISN WRWAGVPFYIRTGKRLAGRDAHIVVNFHPVPHPIFRTPAGVANRLVIHLQPKDGLELHLLAQGAAQHQSEPALSQVHLNL DFEQRFGTERVGAYERLLLDVIAGRLNLFVRSDEQQEAWRWVEPILQHWQDDPVGPRPYAAGSWGPSAASAMIARDGYCW SEEV
Sequences:
>Translated_484_residues MSFDLVLFGGTGDLAWRKLMPALFQAFRHRTLPEGGRIIAVARDDLSDEQYRSRIKSRFDCVELAKRPTPDEFARFAALL HYLRMDLSQTQDYQRLAQTLNARAADSVVMYVATAPSLFTNVCEQIAAVGLNGPGTRVVLEKPLGHDLRSNRAINDSLRR VLREEQVFRIDHYLGKPSVQNLFALRFGNALFEPLWRRETIANIQITIAEELGVETRGAFYDQTGALRDMVQNHALQLLC AIGMEPPINSGANAIRDEKLKVLQSLKPWTADTIGQHVIRGQYAAGNTQGQAMPGYLQEKGVAPGSNTETFVALRTEISN WRWAGVPFYIRTGKRLAGRDAHIVVNFHPVPHPIFRTPAGVANRLVIHLQPKDGLELHLLAQGAAQHQSEPALSQVHLNL DFEQRFGTERVGAYERLLLDVIAGRLNLFVRSDEQQEAWRWVEPILQHWQDDPVGPRPYAAGSWGPSAASAMIARDGYCW SEEV >Mature_483_residues SFDLVLFGGTGDLAWRKLMPALFQAFRHRTLPEGGRIIAVARDDLSDEQYRSRIKSRFDCVELAKRPTPDEFARFAALLH YLRMDLSQTQDYQRLAQTLNARAADSVVMYVATAPSLFTNVCEQIAAVGLNGPGTRVVLEKPLGHDLRSNRAINDSLRRV LREEQVFRIDHYLGKPSVQNLFALRFGNALFEPLWRRETIANIQITIAEELGVETRGAFYDQTGALRDMVQNHALQLLCA IGMEPPINSGANAIRDEKLKVLQSLKPWTADTIGQHVIRGQYAAGNTQGQAMPGYLQEKGVAPGSNTETFVALRTEISNW RWAGVPFYIRTGKRLAGRDAHIVVNFHPVPHPIFRTPAGVANRLVIHLQPKDGLELHLLAQGAAQHQSEPALSQVHLNLD FEQRFGTERVGAYERLLLDVIAGRLNLFVRSDEQQEAWRWVEPILQHWQDDPVGPRPYAAGSWGPSAASAMIARDGYCWS EEV
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI108773793, Length=480, Percent_Identity=36.25, Blast_Score=304, Evalue=1e-82, Organism=Homo sapiens, GI109389365, Length=480, Percent_Identity=36.25, Blast_Score=304, Evalue=1e-82, Organism=Homo sapiens, GI52145310, Length=495, Percent_Identity=27.0707070707071, Blast_Score=149, Evalue=5e-36, Organism=Escherichia coli, GI1788158, Length=490, Percent_Identity=43.0612244897959, Blast_Score=401, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17538218, Length=490, Percent_Identity=33.469387755102, Blast_Score=284, Evalue=9e-77, Organism=Saccharomyces cerevisiae, GI6324088, Length=497, Percent_Identity=33.8028169014084, Blast_Score=259, Evalue=5e-70, Organism=Drosophila melanogaster, GI24643350, Length=488, Percent_Identity=35.4508196721311, Blast_Score=288, Evalue=5e-78, Organism=Drosophila melanogaster, GI24643352, Length=488, Percent_Identity=35.4508196721311, Blast_Score=288, Evalue=6e-78, Organism=Drosophila melanogaster, GI221513548, Length=492, Percent_Identity=30.4878048780488, Blast_Score=220, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 54282; Mature: 54151
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDLVLFGGTGDLAWRKLMPALFQAFRHRTLPEGGRIIAVARDDLSDEQYRSRIKSRFD CCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH CVELAKRPTPDEFARFAALLHYLRMDLSQTQDYQRLAQTLNARAADSVVMYVATAPSLFT HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHH NVCEQIAAVGLNGPGTRVVLEKPLGHDLRSNRAINDSLRRVLREEQVFRIDHYLGKPSVQ HHHHHHHHCCCCCCCCEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH NLFALRFGNALFEPLWRRETIANIQITIAEELGVETRGAFYDQTGALRDMVQNHALQLLC HHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AIGMEPPINSGANAIRDEKLKVLQSLKPWTADTIGQHVIRGQYAAGNTQGQAMPGYLQEK HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHC GVAPGSNTETFVALRTEISNWRWAGVPFYIRTGKRLAGRDAHIVVNFHPVPHPIFRTPAG CCCCCCCCCEEEEEEEECCCCEECCCCEEEECCCCCCCCCCEEEEEECCCCCCHHCCCCC VANRLVIHLQPKDGLELHLLAQGAAQHQSEPALSQVHLNLDFEQRFGTERVGAYERLLLD CCCEEEEEECCCCCCEEEEEECCHHHCCCCCCCEEEEEECCHHHHCCCHHHHHHHHHHHH VIAGRLNLFVRSDEQQEAWRWVEPILQHWQDDPVGPRPYAAGSWGPSAASAMIARDGYCW HHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC SEEV CCCC >Mature Secondary Structure SFDLVLFGGTGDLAWRKLMPALFQAFRHRTLPEGGRIIAVARDDLSDEQYRSRIKSRFD CEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH CVELAKRPTPDEFARFAALLHYLRMDLSQTQDYQRLAQTLNARAADSVVMYVATAPSLFT HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHH NVCEQIAAVGLNGPGTRVVLEKPLGHDLRSNRAINDSLRRVLREEQVFRIDHYLGKPSVQ HHHHHHHHCCCCCCCCEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH NLFALRFGNALFEPLWRRETIANIQITIAEELGVETRGAFYDQTGALRDMVQNHALQLLC HHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH AIGMEPPINSGANAIRDEKLKVLQSLKPWTADTIGQHVIRGQYAAGNTQGQAMPGYLQEK HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHC GVAPGSNTETFVALRTEISNWRWAGVPFYIRTGKRLAGRDAHIVVNFHPVPHPIFRTPAG CCCCCCCCCEEEEEEEECCCCEECCCCEEEECCCCCCCCCCEEEEEECCCCCCHHCCCCC VANRLVIHLQPKDGLELHLLAQGAAQHQSEPALSQVHLNLDFEQRFGTERVGAYERLLLD CCCEEEEEECCCCCCEEEEEECCHHHCCCCCCCEEEEEECCHHHHCCCHHHHHHHHHHHH VIAGRLNLFVRSDEQQEAWRWVEPILQHWQDDPVGPRPYAAGSWGPSAASAMIARDGYCW HHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC SEEV CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10400573; 11481430 [H]