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The map label for this gene is intA [C]

Identifier: 121611092

GI number: 121611092

Start: 4596992

End: 4597477

Strand: Direct

Name: intA [C]

Synonym: Veis_4176

Alternate gene names: 121611092

Gene position: 4596992-4597477 (Clockwise)

Preceding gene: 121611091

Following gene: 121611095

Centisome position: 82.58

GC content: 62.76

Gene sequence:

>486_bases
ATGGGCTGGCTGGAAGAGGTGATGGTGTTCTCGGGCAACAGTGAGTACCTCTTCCCTGCCCGGCGCAAGGTCCGTTCGCG
CATGGGCAAGCCTGCCACGAACCGGTTTCCGCACATCTCCCCTGACACACTCAACGTCGCCTTGGGACGCTTGACGACCC
TGGAAATCGCGCACTTCACAGTGCACGACATGCGGCGCACCGCGCGAACGCACCTGGCCCGCATGGGCATCGCCCCTGAC
ATCGCGGAGCGAGCCCTGAACCATGCGATTCAATCGACCGAGGGCATCTACAACCAGTACGACTACTTGCGAGAGCGCAG
ACTTGCCCTGACCAGGTGGGCAAACTACCTGCATTCGCTGGAACAAGGAACAGCGCTACCGAACGACGATGCAGCCGAGG
ACGACGACGAGGCCGCACAAGCCGCGAGCGGGTCTGTCATTCGCACGGCACTGCCGGCGGGACTGCGGTGGAGAAACGCA
TCCTGA

Upstream 100 bases:

>100_bases
ATGGAGGACGTTCGAGTCCTTGGCCAAGTCTGGTACGAACGACATATTCTCAAGAAGATCAAGAACCCCGCCGTCGTGGA
ACGGGTTCCCCGACGTCGTG

Downstream 100 bases:

>100_bases
CAAAGAAAGATGCGGTCGCGTGGTGGCTCTCACCCGCGACCGCCGAAGCGATCGCACTTGAAACTTCAGGGCGCATCCAC
GGCAGGCGGCCTTCGTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Integrase Family Protein; Prophage Integrase; Phage Integrase Family Site Specific Recombinase; Phage-Related Integrase; Site-Specific Recombinase Phage Integrase Family Protein; Integrase Or Site-Specific Recombinase; Phage Integrase Family

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MGWLEEVMVFSGNSEYLFPARRKVRSRMGKPATNRFPHISPDTLNVALGRLTTLEIAHFTVHDMRRTARTHLARMGIAPD
IAERALNHAIQSTEGIYNQYDYLRERRLALTRWANYLHSLEQGTALPNDDAAEDDDEAAQAASGSVIRTALPAGLRWRNA
S

Sequences:

>Translated_161_residues
MGWLEEVMVFSGNSEYLFPARRKVRSRMGKPATNRFPHISPDTLNVALGRLTTLEIAHFTVHDMRRTARTHLARMGIAPD
IAERALNHAIQSTEGIYNQYDYLRERRLALTRWANYLHSLEQGTALPNDDAAEDDDEAAQAASGSVIRTALPAGLRWRNA
S
>Mature_160_residues
GWLEEVMVFSGNSEYLFPARRKVRSRMGKPATNRFPHISPDTLNVALGRLTTLEIAHFTVHDMRRTARTHLARMGIAPDI
AERALNHAIQSTEGIYNQYDYLRERRLALTRWANYLHSLEQGTALPNDDAAEDDDEAAQAASGSVIRTALPAGLRWRNAS

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18131; Mature: 17999

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWLEEVMVFSGNSEYLFPARRKVRSRMGKPATNRFPHISPDTLNVALGRLTTLEIAHFT
CCHHHHHHHHCCCCCEECHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VHDMRRTARTHLARMGIAPDIAERALNHAIQSTEGIYNQYDYLRERRLALTRWANYLHSL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQGTALPNDDAAEDDDEAAQAASGSVIRTALPAGLRWRNAS
HHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GWLEEVMVFSGNSEYLFPARRKVRSRMGKPATNRFPHISPDTLNVALGRLTTLEIAHFT
CHHHHHHHHCCCCCEECHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VHDMRRTARTHLARMGIAPDIAERALNHAIQSTEGIYNQYDYLRERRLALTRWANYLHSL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQGTALPNDDAAEDDDEAAQAASGSVIRTALPAGLRWRNAS
HHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA