| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611091
Identifier: 121611091
GI number: 121611091
Start: 4596421
End: 4597035
Strand: Direct
Name: 121611091
Synonym: Veis_4175
Alternate gene names: NA
Gene position: 4596421-4597035 (Clockwise)
Preceding gene: 121611090
Following gene: 121611092
Centisome position: 82.57
GC content: 57.72
Gene sequence:
>615_bases TTGATTTTCAATGGAAAATTCTTTCATGCAGTAGCACCACGTCCCAGGCAAGTGCAAGCTTGCTGGCGGGTTCTGGAGGG TTCGTTGGCGGGTTCATCCCACCGAATCCACTTTCCAACGGCCATCCGGAACCCAGACCCGCCAAACACTGCTGGAGGCT GGGCCATGACTGGGTTTACACAAAATGTTTCAGATCGAACGCTGCGAGCTTGGCTGAACGCCGGGCCCGTAAACAAAGGG ATCGGCGGTGGCCTGATCTTCTTTGCGAAAGAGGCTTCCGCCCGCCAGGGGCAAGCTACCTGGATCCTCCGCTACCGCAT CGGCAACCGTCGACCGGAAAAGGTCCTGGGACGCTATCCGGACATCACTCTCAAGGAAGCCAGAGAGCTCGCTCGACGTG ACCGTGCGTTGGTCCAACAGGGCATCGACGTCAGCGCAAAAAAGCGCCTGGAAAAGCCCAAGGCCCTCGAGATGGAGGAC GTTCGAGTCCTTGGCCAAGTCTGGTACGAACGACATATTCTCAAGAAGATCAAGAACCCCGCCGTCGTGGAACGGGTTCC CCGACGTCGTGATGGGCTGGCTGGAAGAGGTGATGGTGTTCTCGGGCAACAGTGA
Upstream 100 bases:
>100_bases TGAAAATCAACGACTTGGAGCGCATCTCACGCTTCAGGTGCAAAACATAGAGTGATGTTTCCTGGCATCCCATGCCACTC CGAAACGACGCTCTAAGCTG
Downstream 100 bases:
>100_bases GTACCTCTTCCCTGCCCGGCGCAAGGTCCGTTCGCGCATGGGCAAGCCTGCCACGAACCGGTTTCCGCACATCTCCCCTG ACACACTCAACGTCGCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MIFNGKFFHAVAPRPRQVQACWRVLEGSLAGSSHRIHFPTAIRNPDPPNTAGGWAMTGFTQNVSDRTLRAWLNAGPVNKG IGGGLIFFAKEASARQGQATWILRYRIGNRRPEKVLGRYPDITLKEARELARRDRALVQQGIDVSAKKRLEKPKALEMED VRVLGQVWYERHILKKIKNPAVVERVPRRRDGLAGRGDGVLGQQ
Sequences:
>Translated_204_residues MIFNGKFFHAVAPRPRQVQACWRVLEGSLAGSSHRIHFPTAIRNPDPPNTAGGWAMTGFTQNVSDRTLRAWLNAGPVNKG IGGGLIFFAKEASARQGQATWILRYRIGNRRPEKVLGRYPDITLKEARELARRDRALVQQGIDVSAKKRLEKPKALEMED VRVLGQVWYERHILKKIKNPAVVERVPRRRDGLAGRGDGVLGQQ >Mature_204_residues MIFNGKFFHAVAPRPRQVQACWRVLEGSLAGSSHRIHFPTAIRNPDPPNTAGGWAMTGFTQNVSDRTLRAWLNAGPVNKG IGGGLIFFAKEASARQGQATWILRYRIGNRRPEKVLGRYPDITLKEARELARRDRALVQQGIDVSAKKRLEKPKALEMED VRVLGQVWYERHILKKIKNPAVVERVPRRRDGLAGRGDGVLGQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22921; Mature: 22921
Theoretical pI: Translated: 11.70; Mature: 11.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFNGKFFHAVAPRPRQVQACWRVLEGSLAGSSHRIHFPTAIRNPDPPNTAGGWAMTGFT CCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCHHCCCCCCCCCCCCEEECCCC QNVSDRTLRAWLNAGPVNKGIGGGLIFFAKEASARQGQATWILRYRIGNRRPEKVLGRYP CCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHCCCC DITLKEARELARRDRALVQQGIDVSAKKRLEKPKALEMEDVRVLGQVWYERHILKKIKNP CCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC AVVERVPRRRDGLAGRGDGVLGQQ HHHHHCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure MIFNGKFFHAVAPRPRQVQACWRVLEGSLAGSSHRIHFPTAIRNPDPPNTAGGWAMTGFT CCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCHHCCCCCCCCCCCCEEECCCC QNVSDRTLRAWLNAGPVNKGIGGGLIFFAKEASARQGQATWILRYRIGNRRPEKVLGRYP CCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHCCCC DITLKEARELARRDRALVQQGIDVSAKKRLEKPKALEMEDVRVLGQVWYERHILKKIKNP CCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC AVVERVPRRRDGLAGRGDGVLGQQ HHHHHCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA