| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is braC [H]
Identifier: 121611017
GI number: 121611017
Start: 4499209
End: 4500372
Strand: Direct
Name: braC [H]
Synonym: Veis_4101
Alternate gene names: 121611017
Gene position: 4499209-4500372 (Clockwise)
Preceding gene: 121611016
Following gene: 121611018
Centisome position: 80.82
GC content: 63.4
Gene sequence:
>1164_bases ATGACACTTCATCACCTTGCCGCATCGATCATGGCCAGCCTGGCCATGGCCGGCGCCTGTGCGCAGACCCAGGGCGTTGC CAGGGACAGCATCACACTGGGTTCGATACAAGACCTCTCCGGCCCGGTGGCCGGCTTCGGCAAGCAGGCGCGGCTGGGGA TGCTGCTGCGCGTCGACGAGGCCAACGAACAGGGCGGCGTCAACGGCCGCAAGCTCGATCTGAAAGTCGAGGACTCGGGC TACGACCCCAAGAGGGCGGTGCTGGCGGCGCAAAAGCTGGTCAACCAGGACAAGATCTTCATCATGATCGGGCATATCGG CACGGCCCAGAACCTGGCCGCAATGCCCGTGCAGTTCAGCAAGAACGTCATCAACTTTCTGCCCCTGACCGGCGCGCGCG AAGTGTACGAACCCTGGCACAGGCTCAAATATGCGTTCATCGTTTCCTACTATGACCAGATCCGCCTGGCAGCGCCCCGG CTGATCAAGGAAAAGAACGCCGGCAAGATCTGCACCATCTACCAGGACGACGAGTTCGGCCTGGAGGTGATGCGCGGCGG CGAGGCGGCCCTCAAGGCCATGGGCCTGGAGTTCACCGAAAAGACCACGTACAAGCGCGGCGCCACCGATTTCTCGTCCC AGGTGGCGAAGATGAAATCCGCCGGCTGCGACCTCGTGATCCTGGGCACGGTGATCCGCGAAACCATAGGCACCATCGGC GAGGCGCGCAAAACCGGCTTCAGCCCCGCCTTCCTGGGCACCTCGGCCGCCTACACCGACCTGATCCACAAGCTCGGCGG CAAGCCCATGGACGGCCTGTACGCCACGATGACCGTGCAGCACCCCTATCTGGATGAAGCCTCGCAGCCGCTGCGCTTTT GGGCCAACAAGTACAAGACCCGGTTCAACGAAGACCCGAGCGTGTTCTCGGTCTACGGCTACAGCGTGGTCGATGTGTTC GTTCGCGCAGCCCGAAAAGCCGGCCCCCGACTGACGAGCGACAGCTTCATCGCGGCCATGGACACCATGCTCATCGCGCC CGACATCTTCGGCAGCGCCGAGGCCAGCTACGGCCCGCAAAAACGCCTGGGCAGCAGCCTGGCGCGCCTGTCGCAAATCG TCGACGGCAAGTGGAAGGTAGTGTCCGACTACATCCAGCCCTGA
Upstream 100 bases:
>100_bases AGCCCCCGAGCCAACGGCTTTTCATGCATCAGCCTGCCCGGGAAATACGGCGCCCCCGGGGCCAACCAACCCGGTTCCTC CATTGCAAAACAGTCCGACC
Downstream 100 bases:
>100_bases AACAGTGAACCCCCGGGTTCTCGAAAGCACACCACATGATCGAACGCAGCTTGTTCCGGCCCGAGCACCAGGCATTTGCC GACAGCTTTCGCCGCTTCAT
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MTLHHLAASIMASLAMAGACAQTQGVARDSITLGSIQDLSGPVAGFGKQARLGMLLRVDEANEQGGVNGRKLDLKVEDSG YDPKRAVLAAQKLVNQDKIFIMIGHIGTAQNLAAMPVQFSKNVINFLPLTGAREVYEPWHRLKYAFIVSYYDQIRLAAPR LIKEKNAGKICTIYQDDEFGLEVMRGGEAALKAMGLEFTEKTTYKRGATDFSSQVAKMKSAGCDLVILGTVIRETIGTIG EARKTGFSPAFLGTSAAYTDLIHKLGGKPMDGLYATMTVQHPYLDEASQPLRFWANKYKTRFNEDPSVFSVYGYSVVDVF VRAARKAGPRLTSDSFIAAMDTMLIAPDIFGSAEASYGPQKRLGSSLARLSQIVDGKWKVVSDYIQP
Sequences:
>Translated_387_residues MTLHHLAASIMASLAMAGACAQTQGVARDSITLGSIQDLSGPVAGFGKQARLGMLLRVDEANEQGGVNGRKLDLKVEDSG YDPKRAVLAAQKLVNQDKIFIMIGHIGTAQNLAAMPVQFSKNVINFLPLTGAREVYEPWHRLKYAFIVSYYDQIRLAAPR LIKEKNAGKICTIYQDDEFGLEVMRGGEAALKAMGLEFTEKTTYKRGATDFSSQVAKMKSAGCDLVILGTVIRETIGTIG EARKTGFSPAFLGTSAAYTDLIHKLGGKPMDGLYATMTVQHPYLDEASQPLRFWANKYKTRFNEDPSVFSVYGYSVVDVF VRAARKAGPRLTSDSFIAAMDTMLIAPDIFGSAEASYGPQKRLGSSLARLSQIVDGKWKVVSDYIQP >Mature_386_residues TLHHLAASIMASLAMAGACAQTQGVARDSITLGSIQDLSGPVAGFGKQARLGMLLRVDEANEQGGVNGRKLDLKVEDSGY DPKRAVLAAQKLVNQDKIFIMIGHIGTAQNLAAMPVQFSKNVINFLPLTGAREVYEPWHRLKYAFIVSYYDQIRLAAPRL IKEKNAGKICTIYQDDEFGLEVMRGGEAALKAMGLEFTEKTTYKRGATDFSSQVAKMKSAGCDLVILGTVIRETIGTIGE ARKTGFSPAFLGTSAAYTDLIHKLGGKPMDGLYATMTVQHPYLDEASQPLRFWANKYKTRFNEDPSVFSVYGYSVVDVFV RAARKAGPRLTSDSFIAAMDTMLIAPDIFGSAEASYGPQKRLGSSLARLSQIVDGKWKVVSDYIQP
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=248, Percent_Identity=26.2096774193548, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789867, Length=252, Percent_Identity=26.1904761904762, Blast_Score=77, Evalue=3e-15,
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42158; Mature: 42027
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHHLAASIMASLAMAGACAQTQGVARDSITLGSIQDLSGPVAGFGKQARLGMLLRVDE CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCCCHHCCCCCCCCCEEEEEEC ANEQGGVNGRKLDLKVEDSGYDPKRAVLAAQKLVNQDKIFIMIGHIGTAQNLAAMPVQFS CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCHHHH KNVINFLPLTGAREVYEPWHRLKYAFIVSYYDQIRLAAPRLIKEKNAGKICTIYQDDEFG HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC LEVMRGGEAALKAMGLEFTEKTTYKRGATDFSSQVAKMKSAGCDLVILGTVIRETIGTIG HHHHCCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH EARKTGFSPAFLGTSAAYTDLIHKLGGKPMDGLYATMTVQHPYLDEASQPLRFWANKYKT HHHHCCCCHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH RFNEDPSVFSVYGYSVVDVFVRAARKAGPRLTSDSFIAAMDTMLIAPDIFGSAEASYGPQ HCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH KRLGSSLARLSQIVDGKWKVVSDYIQP HHHHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure TLHHLAASIMASLAMAGACAQTQGVARDSITLGSIQDLSGPVAGFGKQARLGMLLRVDE CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCCCHHCCCCCCCCCEEEEEEC ANEQGGVNGRKLDLKVEDSGYDPKRAVLAAQKLVNQDKIFIMIGHIGTAQNLAAMPVQFS CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCHHHH KNVINFLPLTGAREVYEPWHRLKYAFIVSYYDQIRLAAPRLIKEKNAGKICTIYQDDEFG HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC LEVMRGGEAALKAMGLEFTEKTTYKRGATDFSSQVAKMKSAGCDLVILGTVIRETIGTIG HHHHCCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH EARKTGFSPAFLGTSAAYTDLIHKLGGKPMDGLYATMTVQHPYLDEASQPLRFWANKYKT HHHHCCCCHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH RFNEDPSVFSVYGYSVVDVFVRAARKAGPRLTSDSFIAAMDTMLIAPDIFGSAEASYGPQ HCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH KRLGSSLARLSQIVDGKWKVVSDYIQP HHHHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]