Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is braC [H]

Identifier: 121611017

GI number: 121611017

Start: 4499209

End: 4500372

Strand: Direct

Name: braC [H]

Synonym: Veis_4101

Alternate gene names: 121611017

Gene position: 4499209-4500372 (Clockwise)

Preceding gene: 121611016

Following gene: 121611018

Centisome position: 80.82

GC content: 63.4

Gene sequence:

>1164_bases
ATGACACTTCATCACCTTGCCGCATCGATCATGGCCAGCCTGGCCATGGCCGGCGCCTGTGCGCAGACCCAGGGCGTTGC
CAGGGACAGCATCACACTGGGTTCGATACAAGACCTCTCCGGCCCGGTGGCCGGCTTCGGCAAGCAGGCGCGGCTGGGGA
TGCTGCTGCGCGTCGACGAGGCCAACGAACAGGGCGGCGTCAACGGCCGCAAGCTCGATCTGAAAGTCGAGGACTCGGGC
TACGACCCCAAGAGGGCGGTGCTGGCGGCGCAAAAGCTGGTCAACCAGGACAAGATCTTCATCATGATCGGGCATATCGG
CACGGCCCAGAACCTGGCCGCAATGCCCGTGCAGTTCAGCAAGAACGTCATCAACTTTCTGCCCCTGACCGGCGCGCGCG
AAGTGTACGAACCCTGGCACAGGCTCAAATATGCGTTCATCGTTTCCTACTATGACCAGATCCGCCTGGCAGCGCCCCGG
CTGATCAAGGAAAAGAACGCCGGCAAGATCTGCACCATCTACCAGGACGACGAGTTCGGCCTGGAGGTGATGCGCGGCGG
CGAGGCGGCCCTCAAGGCCATGGGCCTGGAGTTCACCGAAAAGACCACGTACAAGCGCGGCGCCACCGATTTCTCGTCCC
AGGTGGCGAAGATGAAATCCGCCGGCTGCGACCTCGTGATCCTGGGCACGGTGATCCGCGAAACCATAGGCACCATCGGC
GAGGCGCGCAAAACCGGCTTCAGCCCCGCCTTCCTGGGCACCTCGGCCGCCTACACCGACCTGATCCACAAGCTCGGCGG
CAAGCCCATGGACGGCCTGTACGCCACGATGACCGTGCAGCACCCCTATCTGGATGAAGCCTCGCAGCCGCTGCGCTTTT
GGGCCAACAAGTACAAGACCCGGTTCAACGAAGACCCGAGCGTGTTCTCGGTCTACGGCTACAGCGTGGTCGATGTGTTC
GTTCGCGCAGCCCGAAAAGCCGGCCCCCGACTGACGAGCGACAGCTTCATCGCGGCCATGGACACCATGCTCATCGCGCC
CGACATCTTCGGCAGCGCCGAGGCCAGCTACGGCCCGCAAAAACGCCTGGGCAGCAGCCTGGCGCGCCTGTCGCAAATCG
TCGACGGCAAGTGGAAGGTAGTGTCCGACTACATCCAGCCCTGA

Upstream 100 bases:

>100_bases
AGCCCCCGAGCCAACGGCTTTTCATGCATCAGCCTGCCCGGGAAATACGGCGCCCCCGGGGCCAACCAACCCGGTTCCTC
CATTGCAAAACAGTCCGACC

Downstream 100 bases:

>100_bases
AACAGTGAACCCCCGGGTTCTCGAAAGCACACCACATGATCGAACGCAGCTTGTTCCGGCCCGAGCACCAGGCATTTGCC
GACAGCTTTCGCCGCTTCAT

Product: extracellular ligand-binding receptor

Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]

Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MTLHHLAASIMASLAMAGACAQTQGVARDSITLGSIQDLSGPVAGFGKQARLGMLLRVDEANEQGGVNGRKLDLKVEDSG
YDPKRAVLAAQKLVNQDKIFIMIGHIGTAQNLAAMPVQFSKNVINFLPLTGAREVYEPWHRLKYAFIVSYYDQIRLAAPR
LIKEKNAGKICTIYQDDEFGLEVMRGGEAALKAMGLEFTEKTTYKRGATDFSSQVAKMKSAGCDLVILGTVIRETIGTIG
EARKTGFSPAFLGTSAAYTDLIHKLGGKPMDGLYATMTVQHPYLDEASQPLRFWANKYKTRFNEDPSVFSVYGYSVVDVF
VRAARKAGPRLTSDSFIAAMDTMLIAPDIFGSAEASYGPQKRLGSSLARLSQIVDGKWKVVSDYIQP

Sequences:

>Translated_387_residues
MTLHHLAASIMASLAMAGACAQTQGVARDSITLGSIQDLSGPVAGFGKQARLGMLLRVDEANEQGGVNGRKLDLKVEDSG
YDPKRAVLAAQKLVNQDKIFIMIGHIGTAQNLAAMPVQFSKNVINFLPLTGAREVYEPWHRLKYAFIVSYYDQIRLAAPR
LIKEKNAGKICTIYQDDEFGLEVMRGGEAALKAMGLEFTEKTTYKRGATDFSSQVAKMKSAGCDLVILGTVIRETIGTIG
EARKTGFSPAFLGTSAAYTDLIHKLGGKPMDGLYATMTVQHPYLDEASQPLRFWANKYKTRFNEDPSVFSVYGYSVVDVF
VRAARKAGPRLTSDSFIAAMDTMLIAPDIFGSAEASYGPQKRLGSSLARLSQIVDGKWKVVSDYIQP
>Mature_386_residues
TLHHLAASIMASLAMAGACAQTQGVARDSITLGSIQDLSGPVAGFGKQARLGMLLRVDEANEQGGVNGRKLDLKVEDSGY
DPKRAVLAAQKLVNQDKIFIMIGHIGTAQNLAAMPVQFSKNVINFLPLTGAREVYEPWHRLKYAFIVSYYDQIRLAAPRL
IKEKNAGKICTIYQDDEFGLEVMRGGEAALKAMGLEFTEKTTYKRGATDFSSQVAKMKSAGCDLVILGTVIRETIGTIGE
ARKTGFSPAFLGTSAAYTDLIHKLGGKPMDGLYATMTVQHPYLDEASQPLRFWANKYKTRFNEDPSVFSVYGYSVVDVFV
RAARKAGPRLTSDSFIAAMDTMLIAPDIFGSAEASYGPQKRLGSSLARLSQIVDGKWKVVSDYIQP

Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

Organism=Escherichia coli, GI48994941, Length=248, Percent_Identity=26.2096774193548, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789867, Length=252, Percent_Identity=26.1904761904762, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 42158; Mature: 42027

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLHHLAASIMASLAMAGACAQTQGVARDSITLGSIQDLSGPVAGFGKQARLGMLLRVDE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCCCHHCCCCCCCCCEEEEEEC
ANEQGGVNGRKLDLKVEDSGYDPKRAVLAAQKLVNQDKIFIMIGHIGTAQNLAAMPVQFS
CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCHHHH
KNVINFLPLTGAREVYEPWHRLKYAFIVSYYDQIRLAAPRLIKEKNAGKICTIYQDDEFG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
LEVMRGGEAALKAMGLEFTEKTTYKRGATDFSSQVAKMKSAGCDLVILGTVIRETIGTIG
HHHHCCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH
EARKTGFSPAFLGTSAAYTDLIHKLGGKPMDGLYATMTVQHPYLDEASQPLRFWANKYKT
HHHHCCCCHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH
RFNEDPSVFSVYGYSVVDVFVRAARKAGPRLTSDSFIAAMDTMLIAPDIFGSAEASYGPQ
HCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH
KRLGSSLARLSQIVDGKWKVVSDYIQP
HHHHHHHHHHHHHHCCCHHHHHHHCCC
>Mature Secondary Structure 
TLHHLAASIMASLAMAGACAQTQGVARDSITLGSIQDLSGPVAGFGKQARLGMLLRVDE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCCCHHCCCCCCCCCEEEEEEC
ANEQGGVNGRKLDLKVEDSGYDPKRAVLAAQKLVNQDKIFIMIGHIGTAQNLAAMPVQFS
CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCHHHH
KNVINFLPLTGAREVYEPWHRLKYAFIVSYYDQIRLAAPRLIKEKNAGKICTIYQDDEFG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
LEVMRGGEAALKAMGLEFTEKTTYKRGATDFSSQVAKMKSAGCDLVILGTVIRETIGTIG
HHHHCCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH
EARKTGFSPAFLGTSAAYTDLIHKLGGKPMDGLYATMTVQHPYLDEASQPLRFWANKYKT
HHHHCCCCHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH
RFNEDPSVFSVYGYSVVDVFVRAARKAGPRLTSDSFIAAMDTMLIAPDIFGSAEASYGPQ
HCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH
KRLGSSLARLSQIVDGKWKVVSDYIQP
HHHHHHHHHHHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]

Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2509433; 2120183; 10984043 [H]