Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610991

Identifier: 121610991

GI number: 121610991

Start: 4467560

End: 4468774

Strand: Direct

Name: 121610991

Synonym: Veis_4075

Alternate gene names: NA

Gene position: 4467560-4468774 (Clockwise)

Preceding gene: 121610990

Following gene: 121610992

Centisome position: 80.25

GC content: 60.91

Gene sequence:

>1215_bases
ATGAAGAAACGATCCAAAGTGCTGGCCTCGATGCTGGGCATTGCCTGCCTGGTCGCCTCGGCCACCTCGACCGCATGGGC
GCAACAGACGCCAGACAAGCTCAAGATCGGCTTCATCACCGACATGTCCAGCCTGTACGCCGACCTCGAAGGCAAGAACG
GCGCGCTGGCGATACAGATGGCGATCGACGACTTTGGCGGCAAGGTGCTGGGCATGCCGATCGAGTTGCTCAGCGCAGAC
CATCAGAACAAGGCCGACATCGCCGCCTCGAAGGCGCGCGAATGGATAGACACCCAGGGCCTGACCATGGTGTTTGGCGG
CAGCAATTCCGGCACCGCATTGGCGACGGCCAAAGTGGCGGCCGAGAAAAAACGGGTGTACATCAACAACGGCGCGGCCA
GTTCGGCCCTGACCAATGAGCAATGCTCGCCTTACACGGTGCACTATGCCTACGACACCGTGGCACTGGCCAAGGGCACG
GCCTCGGCCATCGTCGATGCCGGCAGCAAGAGCTGGTTCTTCCTGACGGCAGACTATGCCTTCGGCCACGCGCTCGAAGC
CGACACCAGCGCCGTGATCAAAGCCAAGGGCGGCACCGTGGTCGGCTCGGTGCGCCATCCGCTGAACGCATCGGACTTCT
CGTCCTTCTTGTTGCAGGCGCAAAGCTCCAAGGCGCAAATCCTGGGCCTGGCCACCGCCGGTGGCGACACCATCAACGCG
ATCAAGGCGGCCAAAGAGTTCGGCATCAGCAAGAGCATGCAGATCGCCGGTCTGCTGATCTTCCTGACCGACGTGCACAG
CCTGGGCCTGCGCAACACCGAGGGCCTGCAGTTCACCACCAGTTGGTACTGGGACATGAACGATGAAACACGCAAATTCG
CTGCCCGCTTCTTCGACAAGACCAAGCGCATGCCCTCGTCGATACAGGCGGCCGACTACTCGGCGACGATGAACTACCTC
AAGGCCGTCGAAGCCGCCAAGACGGTGGACGCCGACAAGGTGATGAGCACCTGGCGCGGCATGAAGATGAACGACTTCTT
CGGCTCGGGCCAATTGCGTGCCGACGGCCGCTATGTGCATGACATGTACCTGATGGAGGTCAAGAAACCTTCGGAATCGA
CCAAGCCCTGGGACTACTACAAACTGATCAAGAAACTGCCGGGCGACGAGGTATTCACCACCAAGGCCGAGAGCAAATGC
GCGCTCTGGAAGTGA

Upstream 100 bases:

>100_bases
TGCTCGGCGTTTGAGGCCCGCCCTGCCGCCCCGCATCTCCCCCCTCCCCCGCTTACCCCGCTTATCCCAATCCCCGGTTT
TCATCCACAGGAGAAGATCC

Downstream 100 bases:

>100_bases
CGCCCCCGACGGCCGGCGCAGCCCGTTCCCACCCCCTGACCAGTGCCCCAGTGCCACTTGCTTGCCCATGGAAATCTTCG
GCGTCTCATTGTCGGGCCTG

Product: ABC-type transporter, periplasmic component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKKRSKVLASMLGIACLVASATSTAWAQQTPDKLKIGFITDMSSLYADLEGKNGALAIQMAIDDFGGKVLGMPIELLSAD
HQNKADIAASKAREWIDTQGLTMVFGGSNSGTALATAKVAAEKKRVYINNGAASSALTNEQCSPYTVHYAYDTVALAKGT
ASAIVDAGSKSWFFLTADYAFGHALEADTSAVIKAKGGTVVGSVRHPLNASDFSSFLLQAQSSKAQILGLATAGGDTINA
IKAAKEFGISKSMQIAGLLIFLTDVHSLGLRNTEGLQFTTSWYWDMNDETRKFAARFFDKTKRMPSSIQAADYSATMNYL
KAVEAAKTVDADKVMSTWRGMKMNDFFGSGQLRADGRYVHDMYLMEVKKPSESTKPWDYYKLIKKLPGDEVFTTKAESKC
ALWK

Sequences:

>Translated_404_residues
MKKRSKVLASMLGIACLVASATSTAWAQQTPDKLKIGFITDMSSLYADLEGKNGALAIQMAIDDFGGKVLGMPIELLSAD
HQNKADIAASKAREWIDTQGLTMVFGGSNSGTALATAKVAAEKKRVYINNGAASSALTNEQCSPYTVHYAYDTVALAKGT
ASAIVDAGSKSWFFLTADYAFGHALEADTSAVIKAKGGTVVGSVRHPLNASDFSSFLLQAQSSKAQILGLATAGGDTINA
IKAAKEFGISKSMQIAGLLIFLTDVHSLGLRNTEGLQFTTSWYWDMNDETRKFAARFFDKTKRMPSSIQAADYSATMNYL
KAVEAAKTVDADKVMSTWRGMKMNDFFGSGQLRADGRYVHDMYLMEVKKPSESTKPWDYYKLIKKLPGDEVFTTKAESKC
ALWK
>Mature_404_residues
MKKRSKVLASMLGIACLVASATSTAWAQQTPDKLKIGFITDMSSLYADLEGKNGALAIQMAIDDFGGKVLGMPIELLSAD
HQNKADIAASKAREWIDTQGLTMVFGGSNSGTALATAKVAAEKKRVYINNGAASSALTNEQCSPYTVHYAYDTVALAKGT
ASAIVDAGSKSWFFLTADYAFGHALEADTSAVIKAKGGTVVGSVRHPLNASDFSSFLLQAQSSKAQILGLATAGGDTINA
IKAAKEFGISKSMQIAGLLIFLTDVHSLGLRNTEGLQFTTSWYWDMNDETRKFAARFFDKTKRMPSSIQAADYSATMNYL
KAVEAAKTVDADKVMSTWRGMKMNDFFGSGQLRADGRYVHDMYLMEVKKPSESTKPWDYYKLIKKLPGDEVFTTKAESKC
ALWK

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 43714; Mature: 43714

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRSKVLASMLGIACLVASATSTAWAQQTPDKLKIGFITDMSSLYADLEGKNGALAIQM
CCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEECHHHHHHHCCCCCCEEEEEE
AIDDFGGKVLGMPIELLSADHQNKADIAASKAREWIDTQGLTMVFGGSNSGTALATAKVA
EEECCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEHHH
AEKKRVYINNGAASSALTNEQCSPYTVHYAYDTVALAKGTASAIVDAGSKSWFFLTADYA
HCCCEEEEECCCCCCCCCCCCCCCEEEEEEECEEEECCCCHHHHEECCCCEEEEEEECCC
FGHALEADTSAVIKAKGGTVVGSVRHPLNASDFSSFLLQAQSSKAQILGLATAGGDTINA
CCCEECCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHH
IKAAKEFGISKSMQIAGLLIFLTDVHSLGLRNTEGLQFTTSWYWDMNDETRKFAARFFDK
HHHHHHHCCCCCHHHHHHHHEEHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH
TKRMPSSIQAADYSATMNYLKAVEAAKTVDADKVMSTWRGMKMNDFFGSGQLRADGRYVH
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCCEEEECCEEEE
DMYLMEVKKPSESTKPWDYYKLIKKLPGDEVFTTKAESKCALWK
EEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MKKRSKVLASMLGIACLVASATSTAWAQQTPDKLKIGFITDMSSLYADLEGKNGALAIQM
CCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEEECHHHHHHHCCCCCCEEEEEE
AIDDFGGKVLGMPIELLSADHQNKADIAASKAREWIDTQGLTMVFGGSNSGTALATAKVA
EEECCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEHHH
AEKKRVYINNGAASSALTNEQCSPYTVHYAYDTVALAKGTASAIVDAGSKSWFFLTADYA
HCCCEEEEECCCCCCCCCCCCCCCEEEEEEECEEEECCCCHHHHEECCCCEEEEEEECCC
FGHALEADTSAVIKAKGGTVVGSVRHPLNASDFSSFLLQAQSSKAQILGLATAGGDTINA
CCCEECCCCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHH
IKAAKEFGISKSMQIAGLLIFLTDVHSLGLRNTEGLQFTTSWYWDMNDETRKFAARFFDK
HHHHHHHCCCCCHHHHHHHHEEHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH
TKRMPSSIQAADYSATMNYLKAVEAAKTVDADKVMSTWRGMKMNDFFGSGQLRADGRYVH
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCCCCEEEECCEEEE
DMYLMEVKKPSESTKPWDYYKLIKKLPGDEVFTTKAESKCALWK
EEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA