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The map label for this gene is tapC [H]

Identifier: 121610838

GI number: 121610838

Start: 4308265

End: 4309488

Strand: Direct

Name: tapC [H]

Synonym: Veis_3920

Alternate gene names: 121610838

Gene position: 4308265-4309488 (Clockwise)

Preceding gene: 121610837

Following gene: 121610839

Centisome position: 77.39

GC content: 56.37

Gene sequence:

>1224_bases
ATGGCAACCATCACGGCAGCAAAAAGAGAGATCAAGGAAAAAGTCTTCGAATGGGAAGGCAAGGACCGCAATGGAAAAAT
CGTCCGCGGCGAGATCCGGGCGGTTGGTGAAAACCAGGTGCAGGCGAGCCTGCGCCGTCAAGGGGTGCTCTCGACGAAAA
TCAAGGAGCGCCGCATGCGCTCCGGCAAGAAGGTCAAACCCAAGGATATTGCACTTTTTACCCGGCAATTGGCGACCATG
ATGAAGGCCGGTGTTCCGCTGCTGCAGTCCTTCGACATCGTGGGGCGTGGCTCTACCAACCCCAGTGTCACCAAATTGCT
CAATGACATCCGCTCCGATATCGAGACCGGCACTTCCCTGAGCGGTGCCTTCAGACATTATCCAAAATACTTCAACGAGC
TCTACTGCAATCTGGTGGAGGCCGGCGAAACCGCCGGTATTTTGGAATCCCTGCTGGATCGGCTTGCCACTTACATGGAA
AAAACCGAGGCGATCAAGTCACGGATCAAATCGGCCTTGATGTACCCCAGCGCGGTGCTGTGCGTGGCCTTTGTGGTGGT
GTCGCTGATCATGGTTTTCGTGATCCCGGCCTTCAAAGAGGTTTTCACCTCCTTCGGCGCCGATCTTCCGCCGCCCACCT
TGCTCGTCATGGCCATCAGTGAGACTTTCGTCCACTGGTGGTGGTTGATTTTCGGGGGTGTCGGTGGTGGCATTTTCTTC
TTCATGCAGTCCTGGCGGCGCAATGAGAAATTGCAGAAGTTCATGGATCGCCTGCTGTTGCGCTTGCCGATTTTCGGGGT
ACTGTTCGAGAAAGCATGCGTTGCGCGCTGGACCCGAACGCTGTCGACGATGTTTGCCGCCGGGGTTCCGCTCGTGGAGG
CGCTGGACTCGGTGGGGGGGGCCGCAGGCAACTCGGTCTACGCGTCGGTAACGGACAAGATTCAGCAGGAAGTCTCCACC
GGCACCAGTCTCACGGTGGCCATGGGCAACGCCAATATCTTTCCGACGATGGTGCTGCAAATGTGTGCCATTGGTGAAGA
GACCGGTTCCATCGATCACATGCTGGGCAAGGCCGCCGATTTTTACGAGGCAGAAGTCGATACCATGGTGGCGGGCATAT
CCAGCCTGATGGAGCCGATCATCATCGTTTTTCTTGGCTGCCTGATCGGCGGCATCGTCATCTCGATGTATCTGCCGATC
TTCAAATTGGGACAGGTCGTGTAA

Upstream 100 bases:

>100_bases
CGCGACGCGGGCCTGTACAAGGCCAAGTTGGGCCTGACTTCCCTCGAAGAAGTCCTGGCCGTCACCAACGAATAACACAT
GGCATTTACCGGAGGGCAGC

Downstream 100 bases:

>100_bases
TGCTTGCGGGCCTGTGGCTGGACGCGGCATTGGGCGGCGTGATCGGTCTGCTTTTCGGCAGCTTTTTGAATGTGGTCATT
TACCGCCTGCCGAAGATGAT

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MATITAAKREIKEKVFEWEGKDRNGKIVRGEIRAVGENQVQASLRRQGVLSTKIKERRMRSGKKVKPKDIALFTRQLATM
MKAGVPLLQSFDIVGRGSTNPSVTKLLNDIRSDIETGTSLSGAFRHYPKYFNELYCNLVEAGETAGILESLLDRLATYME
KTEAIKSRIKSALMYPSAVLCVAFVVVSLIMVFVIPAFKEVFTSFGADLPPPTLLVMAISETFVHWWWLIFGGVGGGIFF
FMQSWRRNEKLQKFMDRLLLRLPIFGVLFEKACVARWTRTLSTMFAAGVPLVEALDSVGGAAGNSVYASVTDKIQQEVST
GTSLTVAMGNANIFPTMVLQMCAIGEETGSIDHMLGKAADFYEAEVDTMVAGISSLMEPIIIVFLGCLIGGIVISMYLPI
FKLGQVV

Sequences:

>Translated_407_residues
MATITAAKREIKEKVFEWEGKDRNGKIVRGEIRAVGENQVQASLRRQGVLSTKIKERRMRSGKKVKPKDIALFTRQLATM
MKAGVPLLQSFDIVGRGSTNPSVTKLLNDIRSDIETGTSLSGAFRHYPKYFNELYCNLVEAGETAGILESLLDRLATYME
KTEAIKSRIKSALMYPSAVLCVAFVVVSLIMVFVIPAFKEVFTSFGADLPPPTLLVMAISETFVHWWWLIFGGVGGGIFF
FMQSWRRNEKLQKFMDRLLLRLPIFGVLFEKACVARWTRTLSTMFAAGVPLVEALDSVGGAAGNSVYASVTDKIQQEVST
GTSLTVAMGNANIFPTMVLQMCAIGEETGSIDHMLGKAADFYEAEVDTMVAGISSLMEPIIIVFLGCLIGGIVISMYLPI
FKLGQVV
>Mature_406_residues
ATITAAKREIKEKVFEWEGKDRNGKIVRGEIRAVGENQVQASLRRQGVLSTKIKERRMRSGKKVKPKDIALFTRQLATMM
KAGVPLLQSFDIVGRGSTNPSVTKLLNDIRSDIETGTSLSGAFRHYPKYFNELYCNLVEAGETAGILESLLDRLATYMEK
TEAIKSRIKSALMYPSAVLCVAFVVVSLIMVFVIPAFKEVFTSFGADLPPPTLLVMAISETFVHWWWLIFGGVGGGIFFF
MQSWRRNEKLQKFMDRLLLRLPIFGVLFEKACVARWTRTLSTMFAAGVPLVEALDSVGGAAGNSVYASVTDKIQQEVSTG
TSLTVAMGNANIFPTMVLQMCAIGEETGSIDHMLGKAADFYEAEVDTMVAGISSLMEPIIIVFLGCLIGGIVISMYLPIF
KLGQVV

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=396, Percent_Identity=29.7979797979798, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1786295, Length=397, Percent_Identity=26.7002518891688, Blast_Score=153, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 44816; Mature: 44685

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATITAAKREIKEKVFEWEGKDRNGKIVRGEIRAVGENQVQASLRRQGVLSTKIKERRMR
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHH
SGKKVKPKDIALFTRQLATMMKAGVPLLQSFDIVGRGSTNPSVTKLLNDIRSDIETGTSL
CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCH
SGAFRHYPKYFNELYCNLVEAGETAGILESLLDRLATYMEKTEAIKSRIKSALMYPSAVL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
CVAFVVVSLIMVFVIPAFKEVFTSFGADLPPPTLLVMAISETFVHWWWLIFGGVGGGIFF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
FMQSWRRNEKLQKFMDRLLLRLPIFGVLFEKACVARWTRTLSTMFAAGVPLVEALDSVGG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
AAGNSVYASVTDKIQQEVSTGTSLTVAMGNANIFPTMVLQMCAIGEETGSIDHMLGKAAD
CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH
FYEAEVDTMVAGISSLMEPIIIVFLGCLIGGIVISMYLPIFKLGQVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATITAAKREIKEKVFEWEGKDRNGKIVRGEIRAVGENQVQASLRRQGVLSTKIKERRMR
CCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]