Click here to switch to the map view.

The map label for this gene is acrR [C]

Identifier: 121610779

GI number: 121610779

Start: 4256804

End: 4257439

Strand: Direct

Name: acrR [C]

Synonym: Veis_3859

Alternate gene names: 121610779

Gene position: 4256804-4257439 (Clockwise)

Preceding gene: 121610777

Following gene: 121610780

Centisome position: 76.47

GC content: 59.91

Gene sequence:

>636_bases
ATGTCCGCCCAAACGCCCTCGAAGCGAAACACCCAGTCCTCCCGCAGAACACAAGCAGACCGTCGCCAAGACGCCGAGCA
GCGCCTGCTCGAGAGCGGGCTCAAGGTGATCGCCCAGAAGGGCGTGGCAGGCATGACGCTCAACGAGGTTGGCGCTATCG
CTGGCTACAGCCGAAGCTTGGTGGCGTATCACTACGACAACAAAGAACAATTCCTCGGCGCGCTGGCGCACTATGTGCGC
CAGCGCATCCAGGAAGTCCGCGACCAGAGACCATCCGCGGAACCCGGCCTGCCCCGGCTACTCGGCAGCATCGCTCAGTA
CATGCGCACCCCTAGTTCACATGGCCGGGCGATCTATGCCATGCTCAATGAAGCCATGATCTTCGATGGCAACCTGCAGG
TATACATGCGTGAGTTCACGCAGTTGACGATCAACACTTACGCCACCCAGTTGCGCATGGCCATCGAAAAAGGCAAAATC
AGCGCCGATATCGACGCGGAGACCACCGCGATCGTCATCGTGGGGATGCTACGCGGCACCGCCATGCAATACCTGCTGGA
TCCAGAGCGGTTTCCAATGGAGAAAATCACCAGCACGATGCTTGATAGCGTGCGTCGCATGCTGGGCGCGACCTGA

Upstream 100 bases:

>100_bases
GATTCATTTTTCCCATGCGTTGCATTTAACCACAAGCGGGGTGTTGTTTCAATGGTGCAGTGGACTAGTATTCTCTGCCC
AGAAACGATTCTCCAGCGCC

Downstream 100 bases:

>100_bases
GCACCGGCCCCGGCATCCGCGGTTAACATTCGCCGGGTCCAACTTGCGAGTCAGATTGCAAGTTCCTAGCATTCAAGCAT
GTCAACACAGAGCCAGCCTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator; Transcriptional Repressor For Multidrug Efflux Pump

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSAQTPSKRNTQSSRRTQADRRQDAEQRLLESGLKVIAQKGVAGMTLNEVGAIAGYSRSLVAYHYDNKEQFLGALAHYVR
QRIQEVRDQRPSAEPGLPRLLGSIAQYMRTPSSHGRAIYAMLNEAMIFDGNLQVYMREFTQLTINTYATQLRMAIEKGKI
SADIDAETTAIVIVGMLRGTAMQYLLDPERFPMEKITSTMLDSVRRMLGAT

Sequences:

>Translated_211_residues
MSAQTPSKRNTQSSRRTQADRRQDAEQRLLESGLKVIAQKGVAGMTLNEVGAIAGYSRSLVAYHYDNKEQFLGALAHYVR
QRIQEVRDQRPSAEPGLPRLLGSIAQYMRTPSSHGRAIYAMLNEAMIFDGNLQVYMREFTQLTINTYATQLRMAIEKGKI
SADIDAETTAIVIVGMLRGTAMQYLLDPERFPMEKITSTMLDSVRRMLGAT
>Mature_210_residues
SAQTPSKRNTQSSRRTQADRRQDAEQRLLESGLKVIAQKGVAGMTLNEVGAIAGYSRSLVAYHYDNKEQFLGALAHYVRQ
RIQEVRDQRPSAEPGLPRLLGSIAQYMRTPSSHGRAIYAMLNEAMIFDGNLQVYMREFTQLTINTYATQLRMAIEKGKIS
ADIDAETTAIVIVGMLRGTAMQYLLDPERFPMEKITSTMLDSVRRMLGAT

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23665; Mature: 23533

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQTPSKRNTQSSRRTQADRRQDAEQRLLESGLKVIAQKGVAGMTLNEVGAIAGYSRSL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCE
VAYHYDNKEQFLGALAHYVRQRIQEVRDQRPSAEPGLPRLLGSIAQYMRTPSSHGRAIYA
EEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH
MLNEAMIFDGNLQVYMREFTQLTINTYATQLRMAIEKGKISADIDAETTAIVIVGMLRGT
HHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
AMQYLLDPERFPMEKITSTMLDSVRRMLGAT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAQTPSKRNTQSSRRTQADRRQDAEQRLLESGLKVIAQKGVAGMTLNEVGAIAGYSRSL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCE
VAYHYDNKEQFLGALAHYVRQRIQEVRDQRPSAEPGLPRLLGSIAQYMRTPSSHGRAIYA
EEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH
MLNEAMIFDGNLQVYMREFTQLTINTYATQLRMAIEKGKISADIDAETTAIVIVGMLRGT
HHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
AMQYLLDPERFPMEKITSTMLDSVRRMLGAT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA