Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is ycgI [H]

Identifier: 121610714

GI number: 121610714

Start: 4181260

End: 4181967

Strand: Direct

Name: ycgI [H]

Synonym: Veis_3791

Alternate gene names: 121610714

Gene position: 4181260-4181967 (Clockwise)

Preceding gene: 121610713

Following gene: 121610715

Centisome position: 75.11

GC content: 63.84

Gene sequence:

>708_bases
ATGCACACCATGCACACGGCAACACCCACCGCTTTCCCATCCCCTGCCTGCGCGGCAACGGCCTCCCTTCGGGAAAGCCG
CCTCGATGTGGCCAGCGCCGCAACGCGGCATCGGCAGCCTGCGGGCGAGCCTTATCTGGCCGAGATCGGGGCCGGCCAGA
TCGTTCGCATCGTCGACCTCGAAGGCAATCAGGCGGTCGATGCGCTTTTCTACAACCGGCATGACCTGGCCGAGCACTAC
AGCATGGCCGAAACGCTCTTGCACCAGGGCGGCGTTTACCTGACGAGCGACTCGATGCTGATGTCGTCACGAGGGCGCGC
GATGCTGACCATCGTCGCCGACACCTGCGGCAGGCACGACACGCTCGGCGGCGCCTGCGCCGCCGAGAGCAACACCGTCC
GCTACGCGCTGCAAAAGAAATTCATGCACTCCTGCCGCGACAACTATCTGCTGGCCATCGCCGATGCCGGCATCGGTCTG
GGCAAGCGGGACCTGGTGCCGAACATCAATTTCTTCATGAACGTTCCGGTCACGCCGCAAGGCGGGCTGCAGTTTGCCGA
CGGCGTGTCCGGCCCCGGAAAGTATGTCGAACTGCGCGCCGAGATGGATGTCTGGATGCTGCTCTCGAACTGCCCGCAAC
TGAACAACCCTTGCAATGCCTACGAGCCGACGGCGATCGAACTCATCGTCTGGAATCCCTGCGCCTGA

Upstream 100 bases:

>100_bases
GGACTTTTGCCGCAACTGGCGCCCGCAATGCGCGCGCGCAATGCACAACAGCGATGTGTTTGCACGCTGCTGACGGCGCC
ACACCCCCCAGGAAAACACC

Downstream 100 bases:

>100_bases
CGCGCGGACCGGCAGGACGCCCCCCCGCCCCGAGAAAACACCCCCACCCCCATGCCCACCCCTCCTGGCTTCGACAAGGT
ACTGATTGCCAACCGGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MHTMHTATPTAFPSPACAATASLRESRLDVASAATRHRQPAGEPYLAEIGAGQIVRIVDLEGNQAVDALFYNRHDLAEHY
SMAETLLHQGGVYLTSDSMLMSSRGRAMLTIVADTCGRHDTLGGACAAESNTVRYALQKKFMHSCRDNYLLAIADAGIGL
GKRDLVPNINFFMNVPVTPQGGLQFADGVSGPGKYVELRAEMDVWMLLSNCPQLNNPCNAYEPTAIELIVWNPCA

Sequences:

>Translated_235_residues
MHTMHTATPTAFPSPACAATASLRESRLDVASAATRHRQPAGEPYLAEIGAGQIVRIVDLEGNQAVDALFYNRHDLAEHY
SMAETLLHQGGVYLTSDSMLMSSRGRAMLTIVADTCGRHDTLGGACAAESNTVRYALQKKFMHSCRDNYLLAIADAGIGL
GKRDLVPNINFFMNVPVTPQGGLQFADGVSGPGKYVELRAEMDVWMLLSNCPQLNNPCNAYEPTAIELIVWNPCA
>Mature_235_residues
MHTMHTATPTAFPSPACAATASLRESRLDVASAATRHRQPAGEPYLAEIGAGQIVRIVDLEGNQAVDALFYNRHDLAEHY
SMAETLLHQGGVYLTSDSMLMSSRGRAMLTIVADTCGRHDTLGGACAAESNTVRYALQKKFMHSCRDNYLLAIADAGIGL
GKRDLVPNINFFMNVPVTPQGGLQFADGVSGPGKYVELRAEMDVWMLLSNCPQLNNPCNAYEPTAIELIVWNPCA

Specific function: Unknown

COG id: COG3665

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018959 [H]

Pfam domain/function: PF09347 DUF1989 [H]

EC number: NA

Molecular weight: Translated: 25427; Mature: 25427

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTMHTATPTAFPSPACAATASLRESRLDVASAATRHRQPAGEPYLAEIGAGQIVRIVDL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEC
EGNQAVDALFYNRHDLAEHYSMAETLLHQGGVYLTSDSMLMSSRGRAMLTIVADTCGRHD
CCCCEEHHHHHCHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEEEEEEECCCCCCC
TLGGACAAESNTVRYALQKKFMHSCRDNYLLAIADAGIGLGKRDLVPNINFFMNVPVTPQ
CCCCEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCC
GGLQFADGVSGPGKYVELRAEMDVWMLLSNCPQLNNPCNAYEPTAIELIVWNPCA
CCCEECCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure
MHTMHTATPTAFPSPACAATASLRESRLDVASAATRHRQPAGEPYLAEIGAGQIVRIVDL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEC
EGNQAVDALFYNRHDLAEHYSMAETLLHQGGVYLTSDSMLMSSRGRAMLTIVADTCGRHD
CCCCEEHHHHHCHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEEEEEEECCCCCCC
TLGGACAAESNTVRYALQKKFMHSCRDNYLLAIADAGIGLGKRDLVPNINFFMNVPVTPQ
CCCCEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCC
GGLQFADGVSGPGKYVELRAEMDVWMLLSNCPQLNNPCNAYEPTAIELIVWNPCA
CCCEECCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10568751 [H]