| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is ycgI [H]
Identifier: 121610714
GI number: 121610714
Start: 4181260
End: 4181967
Strand: Direct
Name: ycgI [H]
Synonym: Veis_3791
Alternate gene names: 121610714
Gene position: 4181260-4181967 (Clockwise)
Preceding gene: 121610713
Following gene: 121610715
Centisome position: 75.11
GC content: 63.84
Gene sequence:
>708_bases ATGCACACCATGCACACGGCAACACCCACCGCTTTCCCATCCCCTGCCTGCGCGGCAACGGCCTCCCTTCGGGAAAGCCG CCTCGATGTGGCCAGCGCCGCAACGCGGCATCGGCAGCCTGCGGGCGAGCCTTATCTGGCCGAGATCGGGGCCGGCCAGA TCGTTCGCATCGTCGACCTCGAAGGCAATCAGGCGGTCGATGCGCTTTTCTACAACCGGCATGACCTGGCCGAGCACTAC AGCATGGCCGAAACGCTCTTGCACCAGGGCGGCGTTTACCTGACGAGCGACTCGATGCTGATGTCGTCACGAGGGCGCGC GATGCTGACCATCGTCGCCGACACCTGCGGCAGGCACGACACGCTCGGCGGCGCCTGCGCCGCCGAGAGCAACACCGTCC GCTACGCGCTGCAAAAGAAATTCATGCACTCCTGCCGCGACAACTATCTGCTGGCCATCGCCGATGCCGGCATCGGTCTG GGCAAGCGGGACCTGGTGCCGAACATCAATTTCTTCATGAACGTTCCGGTCACGCCGCAAGGCGGGCTGCAGTTTGCCGA CGGCGTGTCCGGCCCCGGAAAGTATGTCGAACTGCGCGCCGAGATGGATGTCTGGATGCTGCTCTCGAACTGCCCGCAAC TGAACAACCCTTGCAATGCCTACGAGCCGACGGCGATCGAACTCATCGTCTGGAATCCCTGCGCCTGA
Upstream 100 bases:
>100_bases GGACTTTTGCCGCAACTGGCGCCCGCAATGCGCGCGCGCAATGCACAACAGCGATGTGTTTGCACGCTGCTGACGGCGCC ACACCCCCCAGGAAAACACC
Downstream 100 bases:
>100_bases CGCGCGGACCGGCAGGACGCCCCCCCGCCCCGAGAAAACACCCCCACCCCCATGCCCACCCCTCCTGGCTTCGACAAGGT ACTGATTGCCAACCGGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MHTMHTATPTAFPSPACAATASLRESRLDVASAATRHRQPAGEPYLAEIGAGQIVRIVDLEGNQAVDALFYNRHDLAEHY SMAETLLHQGGVYLTSDSMLMSSRGRAMLTIVADTCGRHDTLGGACAAESNTVRYALQKKFMHSCRDNYLLAIADAGIGL GKRDLVPNINFFMNVPVTPQGGLQFADGVSGPGKYVELRAEMDVWMLLSNCPQLNNPCNAYEPTAIELIVWNPCA
Sequences:
>Translated_235_residues MHTMHTATPTAFPSPACAATASLRESRLDVASAATRHRQPAGEPYLAEIGAGQIVRIVDLEGNQAVDALFYNRHDLAEHY SMAETLLHQGGVYLTSDSMLMSSRGRAMLTIVADTCGRHDTLGGACAAESNTVRYALQKKFMHSCRDNYLLAIADAGIGL GKRDLVPNINFFMNVPVTPQGGLQFADGVSGPGKYVELRAEMDVWMLLSNCPQLNNPCNAYEPTAIELIVWNPCA >Mature_235_residues MHTMHTATPTAFPSPACAATASLRESRLDVASAATRHRQPAGEPYLAEIGAGQIVRIVDLEGNQAVDALFYNRHDLAEHY SMAETLLHQGGVYLTSDSMLMSSRGRAMLTIVADTCGRHDTLGGACAAESNTVRYALQKKFMHSCRDNYLLAIADAGIGL GKRDLVPNINFFMNVPVTPQGGLQFADGVSGPGKYVELRAEMDVWMLLSNCPQLNNPCNAYEPTAIELIVWNPCA
Specific function: Unknown
COG id: COG3665
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018959 [H]
Pfam domain/function: PF09347 DUF1989 [H]
EC number: NA
Molecular weight: Translated: 25427; Mature: 25427
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTMHTATPTAFPSPACAATASLRESRLDVASAATRHRQPAGEPYLAEIGAGQIVRIVDL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEC EGNQAVDALFYNRHDLAEHYSMAETLLHQGGVYLTSDSMLMSSRGRAMLTIVADTCGRHD CCCCEEHHHHHCHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEEEEEEECCCCCCC TLGGACAAESNTVRYALQKKFMHSCRDNYLLAIADAGIGLGKRDLVPNINFFMNVPVTPQ CCCCEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCC GGLQFADGVSGPGKYVELRAEMDVWMLLSNCPQLNNPCNAYEPTAIELIVWNPCA CCCEECCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure MHTMHTATPTAFPSPACAATASLRESRLDVASAATRHRQPAGEPYLAEIGAGQIVRIVDL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEC EGNQAVDALFYNRHDLAEHYSMAETLLHQGGVYLTSDSMLMSSRGRAMLTIVADTCGRHD CCCCEEHHHHHCHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEEEEEEECCCCCCC TLGGACAAESNTVRYALQKKFMHSCRDNYLLAIADAGIGLGKRDLVPNINFFMNVPVTPQ CCCCEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCC GGLQFADGVSGPGKYVELRAEMDVWMLLSNCPQLNNPCNAYEPTAIELIVWNPCA CCCEECCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 10568751 [H]