| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610713
Identifier: 121610713
GI number: 121610713
Start: 4180402
End: 4181232
Strand: Direct
Name: 121610713
Synonym: Veis_3790
Alternate gene names: NA
Gene position: 4180402-4181232 (Clockwise)
Preceding gene: 121610712
Following gene: 121610714
Centisome position: 75.1
GC content: 68.71
Gene sequence:
>831_bases ATGCCAAACCGCCACGCCAGCACCGAAGACCAGGCCGTCGATCAGGCCGTCGATCAGGCCGCTGATCAGGCCGTGGATGC CCCCCCTTCGTGGCAGCGCTTTGCCCCCGATCTCGCGCCCGGGAGCGTGCTGTGCAGCGAGATCATTCCCGGCGGCGGCC ACTGGAGCTGGCGGCTGTCGCGGGGCACCCGTTTGCGCTTTGGCGCGCTGGGCGAACGCGCCAACTGCGCGCTGGTGCTG TATGCGGCGCACGATCATCTGGAGCGCTACAACATGCCGGACACCTGCAAGGCGCTGCATACCGCGCACCTGACCCGCGG CCATGTGCTGATGAGCGACATGGGGCGCGCGATGGCGTCGATCACACAGGATTCGCTGGGCTGGCATGACCCCTTCGGCG CACTGCTGGACACGCCACGGATGCAGGCCAAGTACGGCCGGCAGCGCTTCGAGACGCAGCGCAATGCGATGCACCGCAGC GGGCGCGACGGACTGCTGATCGAGATCGGCAAATACGGCCTGTCGGCGCGCGACTTGATCACGCCGGTCAACCTGTTCAG CCGCGTGGTGGTGGACCCCGAAGGCCGGTTCGACTTCGATGCCCGGCGCAGGGTTCTGGGGCACTCGGTGGAACTCAGAT GCGACATCGACCTGATCGTCGCCCTGTCCTGCGCGCCCCATCCGCTCGACCCGCGCCCGGACTACGCGCCAGGCCCGCTG GGCATCGCCGCCTGGCGCTCGGGGCCGGCCGCGCCCGAGGACTTTTGCCGCAACTGGCGCCCGCAATGCGCGCGCGCAAT GCACAACAGCGATGTGTTTGCACGCTGCTGA
Upstream 100 bases:
>100_bases ACCTCGATCTGCTCGACCAACTCAGCCGCAACGGCGCCAGTGCCCCGCAGGGCGACTGACCCCGCGCCAACGAACGACCA CCCCCACCTGTGAAAAAACC
Downstream 100 bases:
>100_bases CGGCGCCACACCCCCCAGGAAAACACCATGCACACCATGCACACGGCAACACCCACCGCTTTCCCATCCCCTGCCTGCGC GGCAACGGCCTCCCTTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MPNRHASTEDQAVDQAVDQAADQAVDAPPSWQRFAPDLAPGSVLCSEIIPGGGHWSWRLSRGTRLRFGALGERANCALVL YAAHDHLERYNMPDTCKALHTAHLTRGHVLMSDMGRAMASITQDSLGWHDPFGALLDTPRMQAKYGRQRFETQRNAMHRS GRDGLLIEIGKYGLSARDLITPVNLFSRVVVDPEGRFDFDARRRVLGHSVELRCDIDLIVALSCAPHPLDPRPDYAPGPL GIAAWRSGPAAPEDFCRNWRPQCARAMHNSDVFARC
Sequences:
>Translated_276_residues MPNRHASTEDQAVDQAVDQAADQAVDAPPSWQRFAPDLAPGSVLCSEIIPGGGHWSWRLSRGTRLRFGALGERANCALVL YAAHDHLERYNMPDTCKALHTAHLTRGHVLMSDMGRAMASITQDSLGWHDPFGALLDTPRMQAKYGRQRFETQRNAMHRS GRDGLLIEIGKYGLSARDLITPVNLFSRVVVDPEGRFDFDARRRVLGHSVELRCDIDLIVALSCAPHPLDPRPDYAPGPL GIAAWRSGPAAPEDFCRNWRPQCARAMHNSDVFARC >Mature_275_residues PNRHASTEDQAVDQAVDQAADQAVDAPPSWQRFAPDLAPGSVLCSEIIPGGGHWSWRLSRGTRLRFGALGERANCALVLY AAHDHLERYNMPDTCKALHTAHLTRGHVLMSDMGRAMASITQDSLGWHDPFGALLDTPRMQAKYGRQRFETQRNAMHRSG RDGLLIEIGKYGLSARDLITPVNLFSRVVVDPEGRFDFDARRRVLGHSVELRCDIDLIVALSCAPHPLDPRPDYAPGPLG IAAWRSGPAAPEDFCRNWRPQCARAMHNSDVFARC
Specific function: Unknown
COG id: COG3665
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30624; Mature: 30493
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNRHASTEDQAVDQAVDQAADQAVDAPPSWQRFAPDLAPGSVLCSEIIPGGGHWSWRLS CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCEEEEEC RGTRLRFGALGERANCALVLYAAHDHLERYNMPDTCKALHTAHLTRGHVLMSDMGRAMAS CCCEEEECCCCCCCCEEEEEEECHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH ITQDSLGWHDPFGALLDTPRMQAKYGRQRFETQRNAMHRSGRDGLLIEIGKYGLSARDLI HHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH TPVNLFSRVVVDPEGRFDFDARRRVLGHSVELRCDIDLIVALSCAPHPLDPRPDYAPGPL HHHHHHHHEEECCCCCCCHHHHHHHHCCCEEEEECEEEEEEEECCCCCCCCCCCCCCCCC GIAAWRSGPAAPEDFCRNWRPQCARAMHNSDVFARC CEECCCCCCCCHHHHHHCCCHHHHHHHCCCCCEECC >Mature Secondary Structure PNRHASTEDQAVDQAVDQAADQAVDAPPSWQRFAPDLAPGSVLCSEIIPGGGHWSWRLS CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCEEEEEC RGTRLRFGALGERANCALVLYAAHDHLERYNMPDTCKALHTAHLTRGHVLMSDMGRAMAS CCCEEEECCCCCCCCEEEEEEECHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH ITQDSLGWHDPFGALLDTPRMQAKYGRQRFETQRNAMHRSGRDGLLIEIGKYGLSARDLI HHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH TPVNLFSRVVVDPEGRFDFDARRRVLGHSVELRCDIDLIVALSCAPHPLDPRPDYAPGPL HHHHHHHHEEECCCCCCCHHHHHHHHCCCEEEEECEEEEEEEECCCCCCCCCCCCCCCCC GIAAWRSGPAAPEDFCRNWRPQCARAMHNSDVFARC CEECCCCCCCCHHHHHHCCCHHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA