Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is dam [C]

Identifier: 121610681

GI number: 121610681

Start: 4152820

End: 4153647

Strand: Direct

Name: dam [C]

Synonym: Veis_3758

Alternate gene names: 121610681

Gene position: 4152820-4153647 (Clockwise)

Preceding gene: 121610680

Following gene: 121610682

Centisome position: 74.6

GC content: 62.44

Gene sequence:

>828_bases
ATGACTGCGCCTGCCCGCCCGGTGCTGCGCTACCACGGCGGCAAATGGCGCCTGGCGCCGTGGATCATCGGTCATTTTCC
GGCCCACCGGGTCTATGTCGAGCCGTTCGGTGGCGCCGGCTCGGTGTTGCTGCGCAAGCCGCGCGCATACGCCGAGGTCT
ACAACGATCTGGATGGCGAGTTGGTCAACTTGTTCCATGTGGCCCGCGACCGAGGTCCGGCGCTCAGTCAAGCCCTGCGC
TTGACGCCGTTTGCCCGGCGCGAATTCATCGACAGCTATCAGCCGAGCAGTGATTGTCTGGAGCAGGCGCGGCGCACGGT
TGTGCGCTCGTTCATGGGGTTTGGCTCGAACTCGCACAACAAGCGCTCGGGCTTCAGAAACAACTCGAACCGCTGCGGCA
CCACGCCAGCGCACGACTGGGCCAACTACCCGCAGGCCCTCGAGCAGGTCATCGACAGGCTGCGCGGTGTTGTCATCGAG
AGCAAGGATGCCGTCTCGCTCATCGGGCAGATGGATGGAGATGGCACTCTTTTCTACGTGGATCCGCCCTATGTCTTATC
CACCCGGGACAAGGGCCACGATTACCGGCACGAGATGACCGATGCAGATCACGAGAGCCTGGCGCAAACCCTGCATCGGG
TCAAAGGCTTCGTGGTTCTCAGCGGCTACCCGAATCGGCTCTATGCGCGGCTTTTTCCGGATTGGCAGTGCATCGAACGC
CATGTGTTTGCCGATGGCGCCAGACAGCGCGTCGAGTGCCTTTGGCTGAATCCGCCTTGCAGTGCCGCGCTGATCGGGCA
GCAGGCGCAACAAAGGTTGATTGCATGA

Upstream 100 bases:

>100_bases
GCGTCGAGTGGTCCAAGACCACCCGCGGCGGGCGCCAGTTTGATCTGCTCGCCGACTTGGACGCCCCGGCGGCCTGCGCA
TCGGCTTACGGGCTTTGCGA

Downstream 100 bases:

>100_bases
GCGCGCAAAGTCTGCCGATTGTCCGCGACAACGCCCGCCCGCTGCCGGGGTTGCACAAGGGGCCGCCAATGACCTCCACC
ACAGAGTGTGAGCAATGCCA

Product: D12 class N6 adenine-specific DNA methyltransferase

Products: S-adenosyl-L-homocysteine; DNA methylaminopurine [C]

Alternate protein names: DNA Adenine Methylase; Methyltransferase; N6 Adenine-Specific DNA Methyltransferase; Site-Specific DNA Methylase; DNA Adenine Methyltransferase; Adenine-Specific DNA Methyltransferase; Methylase; Site-Specific DNA-Methyltransferase; Adenine Specific DNA Methyltransferase; Phage Methylase; Type II DNA Methyltransferase; DNA Adenine Methylase Subfamily; Phage Associated Type II DNA-Methyltransferase; Phage-Related Methylase; Prophage DNA Adenine Methylase; N6 Adenine-Specific DNA Methyltransferase Protein; DNA Methyltransferase; Prophage; Prophage DNA Methylase; Phage DNA Methylase

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTAPARPVLRYHGGKWRLAPWIIGHFPAHRVYVEPFGGAGSVLLRKPRAYAEVYNDLDGELVNLFHVARDRGPALSQALR
LTPFARREFIDSYQPSSDCLEQARRTVVRSFMGFGSNSHNKRSGFRNNSNRCGTTPAHDWANYPQALEQVIDRLRGVVIE
SKDAVSLIGQMDGDGTLFYVDPPYVLSTRDKGHDYRHEMTDADHESLAQTLHRVKGFVVLSGYPNRLYARLFPDWQCIER
HVFADGARQRVECLWLNPPCSAALIGQQAQQRLIA

Sequences:

>Translated_275_residues
MTAPARPVLRYHGGKWRLAPWIIGHFPAHRVYVEPFGGAGSVLLRKPRAYAEVYNDLDGELVNLFHVARDRGPALSQALR
LTPFARREFIDSYQPSSDCLEQARRTVVRSFMGFGSNSHNKRSGFRNNSNRCGTTPAHDWANYPQALEQVIDRLRGVVIE
SKDAVSLIGQMDGDGTLFYVDPPYVLSTRDKGHDYRHEMTDADHESLAQTLHRVKGFVVLSGYPNRLYARLFPDWQCIER
HVFADGARQRVECLWLNPPCSAALIGQQAQQRLIA
>Mature_274_residues
TAPARPVLRYHGGKWRLAPWIIGHFPAHRVYVEPFGGAGSVLLRKPRAYAEVYNDLDGELVNLFHVARDRGPALSQALRL
TPFARREFIDSYQPSSDCLEQARRTVVRSFMGFGSNSHNKRSGFRNNSNRCGTTPAHDWANYPQALEQVIDRLRGVVIES
KDAVSLIGQMDGDGTLFYVDPPYVLSTRDKGHDYRHEMTDADHESLAQTLHRVKGFVVLSGYPNRLYARLFPDWQCIERH
VFADGARQRVECLWLNPPCSAALIGQQAQQRLIA

Specific function: Methylates DNA Within The Sequence GATC And Protects The DNA From Cleavage By The Restriction Endonuclease Mboi. Although It Shares Sequence Specificity With A Number Of Type II Restriction Endonucleases And Methylases, It Is Thought To Act In Postreplica

COG id: COG0338

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.72 [C]

Molecular weight: Translated: 31145; Mature: 31013

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPARPVLRYHGGKWRLAPWIIGHFPAHRVYVEPFGGAGSVLLRKPRAYAEVYNDLDGE
CCCCCCCHHHHCCCCEEECCHHEECCCCCEEEEECCCCCCCCEEECCHHHHHHHHCCCHH
LVNLFHVARDRGPALSQALRLTPFARREFIDSYQPSSDCLEQARRTVVRSFMGFGSNSHN
HHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
KRSGFRNNSNRCGTTPAHDWANYPQALEQVIDRLRGVVIESKDAVSLIGQMDGDGTLFYV
CCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCEEECCCHHHHHHHCCCCCEEEEEE
DPPYVLSTRDKGHDYRHEMTDADHESLAQTLHRVKGFVVLSGYPNRLYARLFPDWQCIER
CCCEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHCCCHHHHHH
HVFADGARQRVECLWLNPPCSAALIGQQAQQRLIA
HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAPARPVLRYHGGKWRLAPWIIGHFPAHRVYVEPFGGAGSVLLRKPRAYAEVYNDLDGE
CCCCCCHHHHCCCCEEECCHHEECCCCCEEEEECCCCCCCCEEECCHHHHHHHHCCCHH
LVNLFHVARDRGPALSQALRLTPFARREFIDSYQPSSDCLEQARRTVVRSFMGFGSNSHN
HHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
KRSGFRNNSNRCGTTPAHDWANYPQALEQVIDRLRGVVIESKDAVSLIGQMDGDGTLFYV
CCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCEEECCCHHHHHHHCCCCCEEEEEE
DPPYVLSTRDKGHDYRHEMTDADHESLAQTLHRVKGFVVLSGYPNRLYARLFPDWQCIER
CCCEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHCCCHHHHHH
HVFADGARQRVECLWLNPPCSAALIGQQAQQRLIA
HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-methionine; DNA adenine; DNA [C]

Specific reaction: S-Adenosyl-L-methionine + DNA adenine =S-adenosyl-L-homocysteine + DNA methylaminopurine Protein + DNA = Protein-DNA [C]

General reaction: Methyl group transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA