Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610606

Identifier: 121610606

GI number: 121610606

Start: 4068510

End: 4069997

Strand: Direct

Name: 121610606

Synonym: Veis_3679

Alternate gene names: NA

Gene position: 4068510-4069997 (Clockwise)

Preceding gene: 121610602

Following gene: 121610607

Centisome position: 73.09

GC content: 66.06

Gene sequence:

>1488_bases
ATGCCCGAGCCCACCGACACGGCTGATTTCTTCCGCTCCCGTCTGGCCGAGATGATCGACTTGCGCCACCCGCTGGCGGT
GCTGGCGAGCCGTCTTCCCTGGACGCAGATCGAAGCGGCACTGGCACCTTATTTCGCGCGTCGGGTCCGTGCCGGTCGAG
TTCTGGAACACGACGATCTCTTCGGCCCTTCGCTCCAGGTCGCGGGCGCCGGTGTCGCCGCCGCGGGCCGCCCGCGTCTT
CCCCTGCGCCTCATGGCCAGCCTGCTGTATCTGAAGCACGTCTACAAGCTCAGCGACGAGGAACTGGTCGAGCGCTGGGC
CGAGAACGTGCAGTGGCAGTTCTTCAGCGGCATGACCTTCTACGAGCCACGCCTGCCCTGCGACGCCACCCAGATCGGGC
GCTTCCGCTCGATCCTGGGCGAGGCCGGTGTCGAGGAACTCCTGAAGGCCACCATCGACACTGCGGTGGCCTCCAAGGCG
ATCAAGCCGGCCGAGTTCGAGCGCGTGATCGTGGATACCACCGTCCAGGAGAAGGCCATCGCCCACCCCGTGGACTCCCG
CCTGCTGGAGATCGCCCGCGCCAAGGTGGTGGCTGCCGCCAAGCGCGCGGGCATCGCGCTGAAGCAGACCTTCGCCAAGG
AAGGCAAGAACCTGCGCCGCAGGGCTGGCGGCTACGCCCACGCCAAGCAGTTCAAGCGCTTGAAGAAGGTGCTCAAGCGC
CAGCGCACGGTACTGGGTATCGTGCTGCGCGAAGTGCAGCGCAAGCTTTGCAAGTTGCCTGCGACATCGGTGCCTGCCGT
CGATCGCTTGCGCGCACTGATGGGCCGCGCCGAGCGCATTCGCACCCAGCGCCCGAAGGACAAGAACAAACTCTATGCAT
TGCACGCGCCCGAAGTTGAGTGCATCGGCAAGGGGAAGGCGCGCCGGCCTTACGAGTTTGGCGTGAAGGTCAGCGTGGCC
GTCACGCACAAGCAGGGGCTGGTGGTGGGTGCGCGCAGCTTCACGGGCAACCCGTATGACGGCCACACGCTGGCCGAGCA
ACTCGAGCAGGTCAAGATCCTGACGGAGGACACGGGCGCCAGCCCGAAGCAGGCAGTGGTGGACCTGGGGTTCCGGGGCG
TGGACGCAGCCAATCCGGGCATCCAGATCATTCATCGGGGGCGCTTCAAGTCCTTGACCGATGCCCAGCGCCGCTGGCTC
AAGCGAAGGCAGGCGGTGGAGCCCACCATCGGACACCTGAAGCACGACAACGGGATGGATCGGTGCTGGCTGCAGGGTGC
CACCGGTGACGCGCTGCATGCAGTGCTGTGTGCGGCGGGCTACAACATCCGCTGGCTGCTGCGCGCCATCATGCGCCTCG
GGCTCAAGGGCCTTTTATTGCGCCTGATCGCCTTGCTGCGCACGCTCATCGGCGTCCCCCACTTCTTCGCATCCAACGAA
ATCACGCCATCACGCGCCGCCGCGCGGTTCGCTGCGATAGCGAAATGA

Upstream 100 bases:

>100_bases
CTCTGCGACCCGCATGAATGCTGGATTTTTGGCTCTTTGTGGTCCACCGAATCTCCCAGGATTCGTTGAACAGGCAGCTG
ATTCCTGAGAGATTTGCGCA

Downstream 100 bases:

>100_bases
ATTTCGCAGGTCCGACTGGATATGGTGCAACACCTGCGCGACGCGAATGCTTGTGGGCGCAGGCCATGAGCGCCAGGACG
GTGCATCGATGGCCCATTGC

Product: transposase, IS4 family protein

Products: NA

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MPEPTDTADFFRSRLAEMIDLRHPLAVLASRLPWTQIEAALAPYFARRVRAGRVLEHDDLFGPSLQVAGAGVAAAGRPRL
PLRLMASLLYLKHVYKLSDEELVERWAENVQWQFFSGMTFYEPRLPCDATQIGRFRSILGEAGVEELLKATIDTAVASKA
IKPAEFERVIVDTTVQEKAIAHPVDSRLLEIARAKVVAAAKRAGIALKQTFAKEGKNLRRRAGGYAHAKQFKRLKKVLKR
QRTVLGIVLREVQRKLCKLPATSVPAVDRLRALMGRAERIRTQRPKDKNKLYALHAPEVECIGKGKARRPYEFGVKVSVA
VTHKQGLVVGARSFTGNPYDGHTLAEQLEQVKILTEDTGASPKQAVVDLGFRGVDAANPGIQIIHRGRFKSLTDAQRRWL
KRRQAVEPTIGHLKHDNGMDRCWLQGATGDALHAVLCAAGYNIRWLLRAIMRLGLKGLLLRLIALLRTLIGVPHFFASNE
ITPSRAAARFAAIAK

Sequences:

>Translated_495_residues
MPEPTDTADFFRSRLAEMIDLRHPLAVLASRLPWTQIEAALAPYFARRVRAGRVLEHDDLFGPSLQVAGAGVAAAGRPRL
PLRLMASLLYLKHVYKLSDEELVERWAENVQWQFFSGMTFYEPRLPCDATQIGRFRSILGEAGVEELLKATIDTAVASKA
IKPAEFERVIVDTTVQEKAIAHPVDSRLLEIARAKVVAAAKRAGIALKQTFAKEGKNLRRRAGGYAHAKQFKRLKKVLKR
QRTVLGIVLREVQRKLCKLPATSVPAVDRLRALMGRAERIRTQRPKDKNKLYALHAPEVECIGKGKARRPYEFGVKVSVA
VTHKQGLVVGARSFTGNPYDGHTLAEQLEQVKILTEDTGASPKQAVVDLGFRGVDAANPGIQIIHRGRFKSLTDAQRRWL
KRRQAVEPTIGHLKHDNGMDRCWLQGATGDALHAVLCAAGYNIRWLLRAIMRLGLKGLLLRLIALLRTLIGVPHFFASNE
ITPSRAAARFAAIAK
>Mature_494_residues
PEPTDTADFFRSRLAEMIDLRHPLAVLASRLPWTQIEAALAPYFARRVRAGRVLEHDDLFGPSLQVAGAGVAAAGRPRLP
LRLMASLLYLKHVYKLSDEELVERWAENVQWQFFSGMTFYEPRLPCDATQIGRFRSILGEAGVEELLKATIDTAVASKAI
KPAEFERVIVDTTVQEKAIAHPVDSRLLEIARAKVVAAAKRAGIALKQTFAKEGKNLRRRAGGYAHAKQFKRLKKVLKRQ
RTVLGIVLREVQRKLCKLPATSVPAVDRLRALMGRAERIRTQRPKDKNKLYALHAPEVECIGKGKARRPYEFGVKVSVAV
THKQGLVVGARSFTGNPYDGHTLAEQLEQVKILTEDTGASPKQAVVDLGFRGVDAANPGIQIIHRGRFKSLTDAQRRWLK
RRQAVEPTIGHLKHDNGMDRCWLQGATGDALHAVLCAAGYNIRWLLRAIMRLGLKGLLLRLIALLRTLIGVPHFFASNEI
TPSRAAARFAAIAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008490 [H]

Pfam domain/function: PF05598 DUF772 [H]

EC number: NA

Molecular weight: Translated: 55048; Mature: 54917

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEPTDTADFFRSRLAEMIDLRHPLAVLASRLPWTQIEAALAPYFARRVRAGRVLEHDDL
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
FGPSLQVAGAGVAAAGRPRLPLRLMASLLYLKHVYKLSDEELVERWAENVQWQFFSGMTF
CCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCEE
YEPRLPCDATQIGRFRSILGEAGVEELLKATIDTAVASKAIKPAEFERVIVDTTVQEKAI
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH
AHPVDSRLLEIARAKVVAAAKRAGIALKQTFAKEGKNLRRRAGGYAHAKQFKRLKKVLKR
HCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QRTVLGIVLREVQRKLCKLPATSVPAVDRLRALMGRAERIRTQRPKDKNKLYALHAPEVE
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHH
CIGKGKARRPYEFGVKVSVAVTHKQGLVVGARSFTGNPYDGHTLAEQLEQVKILTEDTGA
CCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
SPKQAVVDLGFRGVDAANPGIQIIHRGRFKSLTDAQRRWLKRRQAVEPTIGHLKHDNGMD
CHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCC
RCWLQGATGDALHAVLCAAGYNIRWLLRAIMRLGLKGLLLRLIALLRTLIGVPHFFASNE
CEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHCCCC
ITPSRAAARFAAIAK
CCHHHHHHHHHHHCC
>Mature Secondary Structure 
PEPTDTADFFRSRLAEMIDLRHPLAVLASRLPWTQIEAALAPYFARRVRAGRVLEHDDL
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
FGPSLQVAGAGVAAAGRPRLPLRLMASLLYLKHVYKLSDEELVERWAENVQWQFFSGMTF
CCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCEE
YEPRLPCDATQIGRFRSILGEAGVEELLKATIDTAVASKAIKPAEFERVIVDTTVQEKAI
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHH
AHPVDSRLLEIARAKVVAAAKRAGIALKQTFAKEGKNLRRRAGGYAHAKQFKRLKKVLKR
HCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QRTVLGIVLREVQRKLCKLPATSVPAVDRLRALMGRAERIRTQRPKDKNKLYALHAPEVE
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHH
CIGKGKARRPYEFGVKVSVAVTHKQGLVVGARSFTGNPYDGHTLAEQLEQVKILTEDTGA
CCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
SPKQAVVDLGFRGVDAANPGIQIIHRGRFKSLTDAQRRWLKRRQAVEPTIGHLKHDNGMD
CHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCC
RCWLQGATGDALHAVLCAAGYNIRWLLRAIMRLGLKGLLLRLIALLRTLIGVPHFFASNE
CEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHCCCC
ITPSRAAARFAAIAK
CCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8429568 [H]