| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610602
Identifier: 121610602
GI number: 121610602
Start: 4062185
End: 4063162
Strand: Direct
Name: 121610602
Synonym: Veis_3675
Alternate gene names: NA
Gene position: 4062185-4063162 (Clockwise)
Preceding gene: 121610601
Following gene: 121610606
Centisome position: 72.97
GC content: 56.54
Gene sequence:
>978_bases GTGAAGAACATCAAGATCACGCTGGCGATGGCAGCAACTGCTGCGATGCTGGCCGCCTGTGGTGGCGGTGGTTCAGATAC GCCTGCGGTGGTTACGCCTGCTCCAGATACGCCTGCGGTGGTTACGCCTGCGGTGACAGCGGACACCCTGAACCGTACCA ACACCCCCGGCGTGTATGCCGACAACGAACGCAAGTACATGTTCGATTCGCTCAATCAGGTGCGCGGCATCACGGGCGTG GGCTTTCTCAAGCAGAACGAGGCGCTGGACAAGGCGGCGCAGGCGCACGCGGAATATCTCTGGATGAACCCCGGAGAATC GGGTCATACTGAAAAAATCGACTACGCTGGATTCACTGGAGAAACTCCTGCAGACCGTGCCAGACACTTCGGATATGCAG GGTATGCATCTGAATCCGTGGTTGGCAGCATTACTGCCATGGGCGCCATCAATGGGCTGCTTGGAGGGCCCTACCATGCC AGACACTTGCTTTGGGATGATAACGACCTCGGCACTGGCAGGGTATCCAGTGGCTTACATACCGTGGTTACTGGCACTAA TTCATGGAATGATCGCCAAAAACTCGCCGGCGATCAGATTGCAATGTATCCATGCAACAACATTCAAGTGAATGTGCAGG GTCAAGGTTACGAAACGCCAACCCCAGCCGTATTGAATGGCAAGAAGGATTTCGGTTACAGCAGCATGGCCATTGTTCGT CGCGGTCAGACCTTGGTGGTTGACGCCTGGGAACTGCGCGATGCGGCCGGTAATCTGGTTCCGACCGTGGTGATGACGGG GGCCAACGATACGCTCAAGTATTTCTCGAATCACGAGGCCGCACTGATCCCGCTGAACGCATTGCCCCGTACCGTGACCA CTTACACCAGCGTCCTCAAAGGAAAGAACAATGGCGTGCCGTTCGAGAAGACTTGCACTTGGCGCACTGTGGCCGGTGAG ACAGTGCCGTCGAACTGA
Upstream 100 bases:
>100_bases ATTTGACTTCGAACTCTTTCAGCATAATGTGCATTCGAGGGCAGGCCAACGCACCGGCCGCCCTCGACATGACTTCCATT GATGACTGAAGGAGACCGAT
Downstream 100 bases:
>100_bases GCCATACCCCACAAAGCAAAAACCGCCCTCAGGCGGTTTTTTTGTGCGCTTGCCCATCCTGAAGGCCGAGGTTTGACGCG CCTTCCGATCAAGGCCCGAT
Product: Allergen V5/Tpx-1 family protein
Products: NA
Alternate protein names: SCP-Like Extracellular; Allergen V5/Tpx-1-Like Protein; Allergen V5/Tpx-1
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MKNIKITLAMAATAAMLAACGGGGSDTPAVVTPAPDTPAVVTPAVTADTLNRTNTPGVYADNERKYMFDSLNQVRGITGV GFLKQNEALDKAAQAHAEYLWMNPGESGHTEKIDYAGFTGETPADRARHFGYAGYASESVVGSITAMGAINGLLGGPYHA RHLLWDDNDLGTGRVSSGLHTVVTGTNSWNDRQKLAGDQIAMYPCNNIQVNVQGQGYETPTPAVLNGKKDFGYSSMAIVR RGQTLVVDAWELRDAAGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWRTVAGE TVPSN
Sequences:
>Translated_325_residues MKNIKITLAMAATAAMLAACGGGGSDTPAVVTPAPDTPAVVTPAVTADTLNRTNTPGVYADNERKYMFDSLNQVRGITGV GFLKQNEALDKAAQAHAEYLWMNPGESGHTEKIDYAGFTGETPADRARHFGYAGYASESVVGSITAMGAINGLLGGPYHA RHLLWDDNDLGTGRVSSGLHTVVTGTNSWNDRQKLAGDQIAMYPCNNIQVNVQGQGYETPTPAVLNGKKDFGYSSMAIVR RGQTLVVDAWELRDAAGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWRTVAGE TVPSN >Mature_325_residues MKNIKITLAMAATAAMLAACGGGGSDTPAVVTPAPDTPAVVTPAVTADTLNRTNTPGVYADNERKYMFDSLNQVRGITGV GFLKQNEALDKAAQAHAEYLWMNPGESGHTEKIDYAGFTGETPADRARHFGYAGYASESVVGSITAMGAINGLLGGPYHA RHLLWDDNDLGTGRVSSGLHTVVTGTNSWNDRQKLAGDQIAMYPCNNIQVNVQGQGYETPTPAVLNGKKDFGYSSMAIVR RGQTLVVDAWELRDAAGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLKGKNNGVPFEKTCTWRTVAGE TVPSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34512; Mature: 34512
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIKITLAMAATAAMLAACGGGGSDTPAVVTPAPDTPAVVTPAVTADTLNRTNTPGVYA CCCEEEEEEHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEECCCCHHHCCCCCCCCEEE DNERKYMFDSLNQVRGITGVGFLKQNEALDKAAQAHAEYLWMNPGESGHTEKIDYAGFTG CCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHCEEEEECCCCCCCCCEEEECCCCC ETPADRARHFGYAGYASESVVGSITAMGAINGLLGGPYHARHLLWDDNDLGTGRVSSGLH CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCCCCCCE TVVTGTNSWNDRQKLAGDQIAMYPCNNIQVNVQGQGYETPTPAVLNGKKDFGYSSMAIVR EEEECCCCCCHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCEECCCCCCCCCCEEEEE RGQTLVVDAWELRDAAGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLK CCCEEEEEHHHHHHHCCCEEEEEEEECCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHC GKNNGVPFEKTCTWRTVAGETVPSN CCCCCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MKNIKITLAMAATAAMLAACGGGGSDTPAVVTPAPDTPAVVTPAVTADTLNRTNTPGVYA CCCEEEEEEHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEECCCCHHHCCCCCCCCEEE DNERKYMFDSLNQVRGITGVGFLKQNEALDKAAQAHAEYLWMNPGESGHTEKIDYAGFTG CCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHCEEEEECCCCCCCCCEEEECCCCC ETPADRARHFGYAGYASESVVGSITAMGAINGLLGGPYHARHLLWDDNDLGTGRVSSGLH CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCCCCCCE TVVTGTNSWNDRQKLAGDQIAMYPCNNIQVNVQGQGYETPTPAVLNGKKDFGYSSMAIVR EEEECCCCCCHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCEECCCCCCCCCCEEEEE RGQTLVVDAWELRDAAGNLVPTVVMTGANDTLKYFSNHEAALIPLNALPRTVTTYTSVLK CCCEEEEEHHHHHHHCCCEEEEEEEECCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHC GKNNGVPFEKTCTWRTVAGETVPSN CCCCCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA