Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610558

Identifier: 121610558

GI number: 121610558

Start: 4014883

End: 4017738

Strand: Direct

Name: 121610558

Synonym: Veis_3631

Alternate gene names: NA

Gene position: 4014883-4017738 (Clockwise)

Preceding gene: 121610556

Following gene: 121610559

Centisome position: 72.12

GC content: 70.45

Gene sequence:

>2856_bases
ATGGGCGCTCCCCGGTGTCGCCCTGACCAGGGATCGCAGCGTCAGCCGGTCTGGCACCATGGCTTGCCCTCAGGCAATGA
GTTCGGGGGCGCCCTCGTCCATCCACTGGATACCATGTTTTCATTTTTTCCCCGCAGCAAAATGTCCGAAGCACCTGAAG
TGAATCCGGCCCCGGCCAAAACCCACGAGCCGCAGCCACTCGATGCGCTGACCGGTGGCGCCTTTTCCGCCGCCACCTCC
GGCGAGCGCGCCGCCCGCATTCGCGACTGGCTGCTCACCGAGCCCGCGCCGGAACAATTGCAGGAAGTCTTCAAGGAACT
GAGCCGGCGTGACAAGGGCGCCGCCCGTGCAGTGCGCGAGCGCCTGGACGAAATCCGCCGCGCCAAGGGGCAGCAAGCCA
TCGCTGCCGAATGGGCGGAAAAGGCCCAGGCCCTGCTGGCGACCCCCAAGCTCAACATTGCCGATGCGATGGCCTGGCAG
CGCGATGCCGCCAAGGCCGGCGCCCCGCTGTCGCGCGAGCCGCTGTCGCTGCTCAAGATACAGGTGGCGCAGCGGGTGCA
GGTCATCGAAGACCTGCAGCACCGCGTGCAGGTGCAGCGCGAAGCGGCGGTGCTGCTGGCCCAGCGCATCGAGGTGCTGT
CCACCAAGCCCTGGCGCGATGCGCTGGCCGCGCTCGACGCGCTGCGCGCCGATGTCGCCCACTGGCAGGAGCAGGCCCTG
CAACTGAGCAGCGATGCCAGTTGGGCCAGCGTGGACCTGCGCTTTCCGCCGCTGCTGGAGGCATCGCGCAGCCAACTGCT
GGTGGTGTGGGAGGCGTTCCAGCCGGCGCTGGCCCAGGCCGCTGCGGCCGCCGAAGACGCCGCTGCGCCGCTGCCGCCAG
TGCCCGTGTGGGCCGACGAGTTGCGCGCCGCGCGCGGCTTGCTCGCCGAGGCCGCTGCCAAACCCGCCCGCGCCGCCCGG
CCCAAGCCCGACCCCGAAGTGCTGGCGCAAGCGACCGAACTGGTGCGCGCAGCCCTGGCGACGCTGGAAAAGGCAACCGC
CGAAGGCCATGGCAAGGCCAGCGCCGGCGCCGCAGCGGCGCTGCGCGCCGTGCTCAAGGCGCAGGGCAAGCATATCGATG
ACAAACTGGAGCAGCAGGTGCATGCCGCGCTGGTGGCAGCCGGCGAACTCGAAGGCTGGCAGCGCTGGAGCACCGACCAA
GTGCGCGAAGACCTGGTGGCCAAGGCCGAGGCGCTGCTCACCCGCCCCGAAGGCCAGACCCTGGGCGGACGCAAGATGCA
GGAAACCCTGCGCCATCTGCGCGACCAATGGAAACAGGCCGACCAAGGCGGCGCGCCGAACCACGCGCTGTGGAAGCGGT
TCGACGAGGCTTGCAACGCCGCGCACAAGGTGGTCGAGCTCTGGCTGGACAATATCCGCAGCGAAGCCGCCGAGCACAAG
GCGCAGCGCCTGGCCCTGATCGAAGAGCTCAAGGACTGGGCGCAGCAGCCGGCCGCCTCGGGGGATTGGAAAGCCGTCCA
CCGCGCGCTGCAGCAGTTTGGCGAGCGCTGGCGCGAAGGCGGCCATGTGGGCGAGAAGATCTTCGCCGAGTTGCAGCCGC
TGTGGAAGCAGGCCCTGGCCCTGGCGGCCGCGCCGTTGGAAGCGGCGCAAAAAGAGAGCCTGGCCCGGCGCCAGGCGATG
ATCGAAGAGGCCAACGCGCTGGGCGCCGCAGCCACGCTGCGCATCGACGCCGTCAAGGCCCTGCAGCAGCGCTGGCAGGC
CGAAGCGCAGACCGTGCCGCTGGAGCGCAAGCATGAGCAAAAGCTCTGGGAGGCTTTCCGCAAACCGTTGGACGAAGCCT
TCCAGCGCAAGTCGACCGAGCGCGAGCGCGCCGTCTCCGAACTGAGCGCGCGCGACCGCATGGTCCTCGACGCGGCCAAT
GCCCTGCAAGCGGCCAATGCCAGCGCTGACGCGCAGCAGATTCGCGCTGCGATGCAGGCGCTCGAAGCCGCCTTGCGCGG
CCAGGCCCAGGCGGCGCAAGTGCTGGCCTCGGCGCCCAAGGATGCACAAGATCAGGTACAGGTACAGGTACAGGTGCAGG
TGCAGGAAGAATCTGCACAGGATGCGACGAAAAGCGTAGCCCATCAGACACCGGAAGAAGGGGCTGACCCGGCCAGTGCG
GCGGCGGCGCCTGCCGCCGCGCCCAAGCCTGCGCCACGCCCGGTGGTGGCCGTGCGTGGCGATGACCGCCCCGGCATGAA
GAAGGACATGCTGCCCGCCCCGGGCCGGGGTGGGCGTCCCGGCGAGCGCCGCGCCGACCGGCCGGGAGAGCGCGACCGCA
ATCCGCGTGCCGATGGCCGCAGGGGCGAGCGCAGCGAGCGTGCTGGCCACGGCGCCGACCGCCCGCTGCCCGAAGAGCGC
GGTCCGCGCCTGGGCGACACCGCTTTCCGCGCCCAGCGCGACGCGATGGAGCAGGCCCAACTGGCGCTGAAGAAACTGGC
CGCGTTGGCCCATGGCGAGGCGCTGACCCAGTTGCTCACGGCCTGGCAACAGCGCGACGCAACCCAGGTGCCCGGCACGC
AGGAGCTTGGCGTGCCGGCCGCGATGCGCAGCGCCTGGACGCAAGCGCTGTCAGCGCCACCCCGGGGCGATGCGTCCGAA
GCGCTGCTGCGCCTGGAGATAGCGGCACAAACGCCCACCCCCGCCGAGCACATCGACGCGCGCCGGATGTTGCAACTGCA
ATTGCTCACGCGCCGCAACGACCCGGGCCCCGCCCAGACCTGGGGCCAGGACACGGCCCTGGTGCTGGCCAGTGCCAACG
ACGCCGCCAACACCCACCGGCTGCAACGGGCGTTGAAGGCATTGCTGCGCAAGTAG

Upstream 100 bases:

>100_bases
CGGGCTTTCTTCGGTTTTTCGCAGGCTCGATGCCCTGCTCCGACATTCGGGCCGATGGTTGGGCGCGGTCATCGATCGCG
GTCATACGCGGTTATAGATA

Downstream 100 bases:

>100_bases
CTGCCGGCGGCCGCCCCGGCCGGACTTGCGGCAAGGCCGGGTTCATGGCAGGTTCATGGAACAGGGCCTCGGCGCGGTCG
GCGCGCTGTGCACCCCGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 951; Mature: 950

Protein sequence:

>951_residues
MGAPRCRPDQGSQRQPVWHHGLPSGNEFGGALVHPLDTMFSFFPRSKMSEAPEVNPAPAKTHEPQPLDALTGGAFSAATS
GERAARIRDWLLTEPAPEQLQEVFKELSRRDKGAARAVRERLDEIRRAKGQQAIAAEWAEKAQALLATPKLNIADAMAWQ
RDAAKAGAPLSREPLSLLKIQVAQRVQVIEDLQHRVQVQREAAVLLAQRIEVLSTKPWRDALAALDALRADVAHWQEQAL
QLSSDASWASVDLRFPPLLEASRSQLLVVWEAFQPALAQAAAAAEDAAAPLPPVPVWADELRAARGLLAEAAAKPARAAR
PKPDPEVLAQATELVRAALATLEKATAEGHGKASAGAAAALRAVLKAQGKHIDDKLEQQVHAALVAAGELEGWQRWSTDQ
VREDLVAKAEALLTRPEGQTLGGRKMQETLRHLRDQWKQADQGGAPNHALWKRFDEACNAAHKVVELWLDNIRSEAAEHK
AQRLALIEELKDWAQQPAASGDWKAVHRALQQFGERWREGGHVGEKIFAELQPLWKQALALAAAPLEAAQKESLARRQAM
IEEANALGAAATLRIDAVKALQQRWQAEAQTVPLERKHEQKLWEAFRKPLDEAFQRKSTERERAVSELSARDRMVLDAAN
ALQAANASADAQQIRAAMQALEAALRGQAQAAQVLASAPKDAQDQVQVQVQVQVQEESAQDATKSVAHQTPEEGADPASA
AAAPAAAPKPAPRPVVAVRGDDRPGMKKDMLPAPGRGGRPGERRADRPGERDRNPRADGRRGERSERAGHGADRPLPEER
GPRLGDTAFRAQRDAMEQAQLALKKLAALAHGEALTQLLTAWQQRDATQVPGTQELGVPAAMRSAWTQALSAPPRGDASE
ALLRLEIAAQTPTPAEHIDARRMLQLQLLTRRNDPGPAQTWGQDTALVLASANDAANTHRLQRALKALLRK

Sequences:

>Translated_951_residues
MGAPRCRPDQGSQRQPVWHHGLPSGNEFGGALVHPLDTMFSFFPRSKMSEAPEVNPAPAKTHEPQPLDALTGGAFSAATS
GERAARIRDWLLTEPAPEQLQEVFKELSRRDKGAARAVRERLDEIRRAKGQQAIAAEWAEKAQALLATPKLNIADAMAWQ
RDAAKAGAPLSREPLSLLKIQVAQRVQVIEDLQHRVQVQREAAVLLAQRIEVLSTKPWRDALAALDALRADVAHWQEQAL
QLSSDASWASVDLRFPPLLEASRSQLLVVWEAFQPALAQAAAAAEDAAAPLPPVPVWADELRAARGLLAEAAAKPARAAR
PKPDPEVLAQATELVRAALATLEKATAEGHGKASAGAAAALRAVLKAQGKHIDDKLEQQVHAALVAAGELEGWQRWSTDQ
VREDLVAKAEALLTRPEGQTLGGRKMQETLRHLRDQWKQADQGGAPNHALWKRFDEACNAAHKVVELWLDNIRSEAAEHK
AQRLALIEELKDWAQQPAASGDWKAVHRALQQFGERWREGGHVGEKIFAELQPLWKQALALAAAPLEAAQKESLARRQAM
IEEANALGAAATLRIDAVKALQQRWQAEAQTVPLERKHEQKLWEAFRKPLDEAFQRKSTERERAVSELSARDRMVLDAAN
ALQAANASADAQQIRAAMQALEAALRGQAQAAQVLASAPKDAQDQVQVQVQVQVQEESAQDATKSVAHQTPEEGADPASA
AAAPAAAPKPAPRPVVAVRGDDRPGMKKDMLPAPGRGGRPGERRADRPGERDRNPRADGRRGERSERAGHGADRPLPEER
GPRLGDTAFRAQRDAMEQAQLALKKLAALAHGEALTQLLTAWQQRDATQVPGTQELGVPAAMRSAWTQALSAPPRGDASE
ALLRLEIAAQTPTPAEHIDARRMLQLQLLTRRNDPGPAQTWGQDTALVLASANDAANTHRLQRALKALLRK
>Mature_950_residues
GAPRCRPDQGSQRQPVWHHGLPSGNEFGGALVHPLDTMFSFFPRSKMSEAPEVNPAPAKTHEPQPLDALTGGAFSAATSG
ERAARIRDWLLTEPAPEQLQEVFKELSRRDKGAARAVRERLDEIRRAKGQQAIAAEWAEKAQALLATPKLNIADAMAWQR
DAAKAGAPLSREPLSLLKIQVAQRVQVIEDLQHRVQVQREAAVLLAQRIEVLSTKPWRDALAALDALRADVAHWQEQALQ
LSSDASWASVDLRFPPLLEASRSQLLVVWEAFQPALAQAAAAAEDAAAPLPPVPVWADELRAARGLLAEAAAKPARAARP
KPDPEVLAQATELVRAALATLEKATAEGHGKASAGAAAALRAVLKAQGKHIDDKLEQQVHAALVAAGELEGWQRWSTDQV
REDLVAKAEALLTRPEGQTLGGRKMQETLRHLRDQWKQADQGGAPNHALWKRFDEACNAAHKVVELWLDNIRSEAAEHKA
QRLALIEELKDWAQQPAASGDWKAVHRALQQFGERWREGGHVGEKIFAELQPLWKQALALAAAPLEAAQKESLARRQAMI
EEANALGAAATLRIDAVKALQQRWQAEAQTVPLERKHEQKLWEAFRKPLDEAFQRKSTERERAVSELSARDRMVLDAANA
LQAANASADAQQIRAAMQALEAALRGQAQAAQVLASAPKDAQDQVQVQVQVQVQEESAQDATKSVAHQTPEEGADPASAA
AAPAAAPKPAPRPVVAVRGDDRPGMKKDMLPAPGRGGRPGERRADRPGERDRNPRADGRRGERSERAGHGADRPLPEERG
PRLGDTAFRAQRDAMEQAQLALKKLAALAHGEALTQLLTAWQQRDATQVPGTQELGVPAAMRSAWTQALSAPPRGDASEA
LLRLEIAAQTPTPAEHIDARRMLQLQLLTRRNDPGPAQTWGQDTALVLASANDAANTHRLQRALKALLRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 103435; Mature: 103304

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAPRCRPDQGSQRQPVWHHGLPSGNEFGGALVHPLDTMFSFFPRSKMSEAPEVNPAPAK
CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCC
THEPQPLDALTGGAFSAATSGERAARIRDWLLTEPAPEQLQEVFKELSRRDKGAARAVRE
CCCCCCCHHHCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH
RLDEIRRAKGQQAIAAEWAEKAQALLATPKLNIADAMAWQRDAAKAGAPLSREPLSLLKI
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
QVAQRVQVIEDLQHRVQVQREAAVLLAQRIEVLSTKPWRDALAALDALRADVAHWQEQAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
QLSSDASWASVDLRFPPLLEASRSQLLVVWEAFQPALAQAAAAAEDAAAPLPPVPVWADE
HHCCCCCEEEEECCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
LRAARGLLAEAAAKPARAARPKPDPEVLAQATELVRAALATLEKATAEGHGKASAGAAAA
HHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LRAVLKAQGKHIDDKLEQQVHAALVAAGELEGWQRWSTDQVREDLVAKAEALLTRPEGQT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
LGGRKMQETLRHLRDQWKQADQGGAPNHALWKRFDEACNAAHKVVELWLDNIRSEAAEHK
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRLALIEELKDWAQQPAASGDWKAVHRALQQFGERWREGGHVGEKIFAELQPLWKQALA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LAAAPLEAAQKESLARRQAMIEEANALGAAATLRIDAVKALQQRWQAEAQTVPLERKHEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KLWEAFRKPLDEAFQRKSTERERAVSELSARDRMVLDAANALQAANASADAQQIRAAMQA
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LEAALRGQAQAAQVLASAPKDAQDQVQVQVQVQVQEESAQDATKSVAHQTPEEGADPASA
HHHHHHCHHHHHHHHHHCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCHHH
AAAPAAAPKPAPRPVVAVRGDDRPGMKKDMLPAPGRGGRPGERRADRPGERDRNPRADGR
HCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGERSERAGHGADRPLPEERGPRLGDTAFRAQRDAMEQAQLALKKLAALAHGEALTQLLT
CCCHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWQQRDATQVPGTQELGVPAAMRSAWTQALSAPPRGDASEALLRLEIAAQTPTPAEHIDA
HHHHCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH
RRMLQLQLLTRRNDPGPAQTWGQDTALVLASANDAANTHRLQRALKALLRK
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GAPRCRPDQGSQRQPVWHHGLPSGNEFGGALVHPLDTMFSFFPRSKMSEAPEVNPAPAK
CCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCC
THEPQPLDALTGGAFSAATSGERAARIRDWLLTEPAPEQLQEVFKELSRRDKGAARAVRE
CCCCCCCHHHCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHH
RLDEIRRAKGQQAIAAEWAEKAQALLATPKLNIADAMAWQRDAAKAGAPLSREPLSLLKI
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
QVAQRVQVIEDLQHRVQVQREAAVLLAQRIEVLSTKPWRDALAALDALRADVAHWQEQAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
QLSSDASWASVDLRFPPLLEASRSQLLVVWEAFQPALAQAAAAAEDAAAPLPPVPVWADE
HHCCCCCEEEEECCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
LRAARGLLAEAAAKPARAARPKPDPEVLAQATELVRAALATLEKATAEGHGKASAGAAAA
HHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LRAVLKAQGKHIDDKLEQQVHAALVAAGELEGWQRWSTDQVREDLVAKAEALLTRPEGQT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
LGGRKMQETLRHLRDQWKQADQGGAPNHALWKRFDEACNAAHKVVELWLDNIRSEAAEHK
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQRLALIEELKDWAQQPAASGDWKAVHRALQQFGERWREGGHVGEKIFAELQPLWKQALA
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
LAAAPLEAAQKESLARRQAMIEEANALGAAATLRIDAVKALQQRWQAEAQTVPLERKHEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KLWEAFRKPLDEAFQRKSTERERAVSELSARDRMVLDAANALQAANASADAQQIRAAMQA
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LEAALRGQAQAAQVLASAPKDAQDQVQVQVQVQVQEESAQDATKSVAHQTPEEGADPASA
HHHHHHCHHHHHHHHHHCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCHHH
AAAPAAAPKPAPRPVVAVRGDDRPGMKKDMLPAPGRGGRPGERRADRPGERDRNPRADGR
HCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RGERSERAGHGADRPLPEERGPRLGDTAFRAQRDAMEQAQLALKKLAALAHGEALTQLLT
CCCHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWQQRDATQVPGTQELGVPAAMRSAWTQALSAPPRGDASEALLRLEIAAQTPTPAEHIDA
HHHHCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH
RRMLQLQLLTRRNDPGPAQTWGQDTALVLASANDAANTHRLQRALKALLRK
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA