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The map label for this gene is ttuB [H]

Identifier: 121610472

GI number: 121610472

Start: 3917814

End: 3918734

Strand: Direct

Name: ttuB [H]

Synonym: Veis_3542

Alternate gene names: 121610472

Gene position: 3917814-3918734 (Clockwise)

Preceding gene: 121610471

Following gene: 121610474

Centisome position: 70.38

GC content: 62.43

Gene sequence:

>921_bases
ATGATCGTCGAGAAGCAACTGATCGGCAAAATCTCGCGGCGCCTGATCCCCTTCCTGGGGCTGCTCTACCTGATCGCGTA
CATCGACCGCCAGAACGTCAGCTTCGCCAAGCTGCAGATGGTCGATGCGCTGGGCATGAGCGAATCCGCCTACGGCCTGG
GCGCCTCGCTGTTCTTCATCGGCTACTTTTTCTTCGAGGTGCCCAGCAACCTGGTGCTGGCCAAGGTCGGCGCCAGCAAG
TGGTTCGCCCGCATCATCGTCTCCTGGGGGCTGGTGACGGTGGCGCTGGCGTTCACGAACAGCCCGACCATGTTCTACAT
ACTGCGCTTCCTGCTCGGCGCATGTGAAGCCGGCTTCTTCCCCGGGGTGTTGTACCTGCTGACGCTCTGGTATCCCTTCG
CTTACCGCGCAGCCATGGTCGGCCTGTTCATGATCTTCAGCGCGCTGGCCAACGCCATCGGCGGTCCTCTGGGAGGCATT
TTGCTCGACCTGGACGGACTGCAGGGCCTGGCCGGATGGAAATGGATCTTCATCGTGACCGGCATCCCCGCCGTCGTGAT
GGGCGTGGTCACGCTCTTCTACCTTCCCGACAGCCCGGACGAGGTCCGCTTCCTGAGCGCCGAGGAAAAGCGCTGGTTGC
ACGAGCAACTCGCCGACGAACAAACCCGGATGGGCGACGCCGGGGGCCATGCGCTGCGCGCGCTGATGGATCCACGCGTG
CTGCTGATGTCCCTGTGCTTCATTGCCTTCCCGCTGTCAGCCTACGGACTGAGTAACCGTCTTCCGAGTCAAGTGCCGTG
CAGCGATTTATCCCAAGGTTTGCCGGTTCTGACCATGGCGTTGAGCGTGGTCAGGAGTTTGCGCATGCACGCCACCAGAG
CGACCTTGGGCAGCTTGCCGGCAGCCTTGAGGCGTTCGTAG

Upstream 100 bases:

>100_bases
CACGCCCGGCAGATGCCGCGATGAATGCATCCAACCCCGGCCAGCCCGCGCGCGGCGTCGACCGGCGACAAGCACAAAGA
GACAAACCCAAGGACTGCCA

Downstream 100 bases:

>100_bases
AAGGCCTTGATGGCCGGGTTGTAGCGAGTGGCAGTCAGCGTTGCCATGTACAGCACACGCCGGACCTCGAAGCGTCCTCC
TTGCACCCGTCGTCGGCCCT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MIVEKQLIGKISRRLIPFLGLLYLIAYIDRQNVSFAKLQMVDALGMSESAYGLGASLFFIGYFFFEVPSNLVLAKVGASK
WFARIIVSWGLVTVALAFTNSPTMFYILRFLLGACEAGFFPGVLYLLTLWYPFAYRAAMVGLFMIFSALANAIGGPLGGI
LLDLDGLQGLAGWKWIFIVTGIPAVVMGVVTLFYLPDSPDEVRFLSAEEKRWLHEQLADEQTRMGDAGGHALRALMDPRV
LLMSLCFIAFPLSAYGLSNRLPSQVPCSDLSQGLPVLTMALSVVRSLRMHATRATLGSLPAALRRS

Sequences:

>Translated_306_residues
MIVEKQLIGKISRRLIPFLGLLYLIAYIDRQNVSFAKLQMVDALGMSESAYGLGASLFFIGYFFFEVPSNLVLAKVGASK
WFARIIVSWGLVTVALAFTNSPTMFYILRFLLGACEAGFFPGVLYLLTLWYPFAYRAAMVGLFMIFSALANAIGGPLGGI
LLDLDGLQGLAGWKWIFIVTGIPAVVMGVVTLFYLPDSPDEVRFLSAEEKRWLHEQLADEQTRMGDAGGHALRALMDPRV
LLMSLCFIAFPLSAYGLSNRLPSQVPCSDLSQGLPVLTMALSVVRSLRMHATRATLGSLPAALRRS
>Mature_306_residues
MIVEKQLIGKISRRLIPFLGLLYLIAYIDRQNVSFAKLQMVDALGMSESAYGLGASLFFIGYFFFEVPSNLVLAKVGASK
WFARIIVSWGLVTVALAFTNSPTMFYILRFLLGACEAGFFPGVLYLLTLWYPFAYRAAMVGLFMIFSALANAIGGPLGGI
LLDLDGLQGLAGWKWIFIVTGIPAVVMGVVTLFYLPDSPDEVRFLSAEEKRWLHEQLADEQTRMGDAGGHALRALMDPRV
LLMSLCFIAFPLSAYGLSNRLPSQVPCSDLSQGLPVLTMALSVVRSLRMHATRATLGSLPAALRRS

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI87082071, Length=262, Percent_Identity=41.2213740458015, Blast_Score=205, Evalue=3e-54,
Organism=Escherichia coli, GI1789515, Length=256, Percent_Identity=25, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI87082320, Length=192, Percent_Identity=25.5208333333333, Blast_Score=63, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322612, Length=270, Percent_Identity=26.2962962962963, Blast_Score=85, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6319250, Length=235, Percent_Identity=26.8085106382979, Blast_Score=83, Evalue=6e-17,
Organism=Saccharomyces cerevisiae, GI6322025, Length=240, Percent_Identity=24.5833333333333, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6323032, Length=218, Percent_Identity=26.605504587156, Blast_Score=79, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6319876, Length=222, Percent_Identity=27.027027027027, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6321698, Length=271, Percent_Identity=23.9852398523985, Blast_Score=73, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6321502, Length=227, Percent_Identity=25.1101321585903, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI20130135, Length=242, Percent_Identity=28.099173553719, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 33575; Mature: 33575

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCC
>Mature Secondary Structure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HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]