| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is modE [H]
Identifier: 121610446
GI number: 121610446
Start: 3888403
End: 3888741
Strand: Direct
Name: modE [H]
Synonym: Veis_3515
Alternate gene names: 121610446
Gene position: 3888403-3888741 (Clockwise)
Preceding gene: 121610431
Following gene: 121610449
Centisome position: 69.85
GC content: 64.01
Gene sequence:
>339_bases GTGCTCAAGTTCCGCATACGGATCACCCATGGTGATGCGATCGCCGTCGGCCCGGGCAAAATCGCGCTGCTCGAAGCCAT CGAAGCCACGGGCTCCATCACTGCCGCAGCCAAAACCCTGGGTATGTCGTACCGCCGGGCCTGGTTGCTTCTGGACGAAA CGAACCGGTCGTTGAAACGGCCGGCGGTCGACTCCACCAAGGGTGGTCCGCATGGCGGCGGCAGCCTGCTGACCGATGAA GGCAGGAAACTGATCGCGCTGTACCGACACATCGAGGCCACTGCGCGCACCGCTTGCCGCAGCGACATCAGGCGCCTCAT GGAGATGCTCGCCCGTTGA
Upstream 100 bases:
>100_bases CCGCGCCGGTTCACGCCCACCACATATGCCCGACACCCCCTCTCCCACGACCGGCAAAAACCAAGCCACGCCGGCGCGGA CACGCTCGGCCCCGGGTCCG
Downstream 100 bases:
>100_bases ACATGGGGCAGCAGCCCCGATTCCGATGCGTTGCGGCCGGCCCCGAGCGTCGGTCGAGCGGCAAGGCGTTCTTCTCGTAC ACCACCAGCACACCAGCCCC
Product: ModE family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MLKFRIRITHGDAIAVGPGKIALLEAIEATGSITAAAKTLGMSYRRAWLLLDETNRSLKRPAVDSTKGGPHGGGSLLTDE GRKLIALYRHIEATARTACRSDIRRLMEMLAR
Sequences:
>Translated_112_residues MLKFRIRITHGDAIAVGPGKIALLEAIEATGSITAAAKTLGMSYRRAWLLLDETNRSLKRPAVDSTKGGPHGGGSLLTDE GRKLIALYRHIEATARTACRSDIRRLMEMLAR >Mature_112_residues MLKFRIRITHGDAIAVGPGKIALLEAIEATGSITAAAKTLGMSYRRAWLLLDETNRSLKRPAVDSTKGGPHGGGSLLTDE GRKLIALYRHIEATARTACRSDIRRLMEMLAR
Specific function: Involved in the transport of molybdenum into the cell. May have a role in the early intracellular capture or metabolism of molybdenum [H]
COG id: COG2005
COG function: function code R; N-terminal domain of molybdenum-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the modE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000847 - InterPro: IPR004606 - InterPro: IPR008995 - InterPro: IPR003725 - InterPro: IPR016462 - InterPro: IPR005116 - InterPro: IPR011991 [H]
Pfam domain/function: PF00126 HTH_1; PF03459 TOBE [H]
EC number: NA
Molecular weight: Translated: 12199; Mature: 12199
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKFRIRITHGDAIAVGPGKIALLEAIEATGSITAAAKTLGMSYRRAWLLLDETNRSLKR CEEEEEEEECCCEEEECCCHHHHHHHHHHCCCHHHHHHHHCHHHHHEEEEEECCCCCCCC PAVDSTKGGPHGGGSLLTDEGRKLIALYRHIEATARTACRSDIRRLMEMLAR CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKFRIRITHGDAIAVGPGKIALLEAIEATGSITAAAKTLGMSYRRAWLLLDETNRSLKR CEEEEEEEECCCEEEECCCHHHHHHHHHHCCCHHHHHHHHCHHHHHEEEEEECCCCCCCC PAVDSTKGGPHGGGSLLTDEGRKLIALYRHIEATARTACRSDIRRLMEMLAR CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8384683; 7665518 [H]