| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is yihN [H]
Identifier: 121609855
GI number: 121609855
Start: 3255617
End: 3256888
Strand: Direct
Name: yihN [H]
Synonym: Veis_2908
Alternate gene names: 121609855
Gene position: 3255617-3256888 (Clockwise)
Preceding gene: 121609854
Following gene: 121609856
Centisome position: 58.48
GC content: 57.47
Gene sequence:
>1272_bases ATGTCGAGCAACACCATGCTGCACGCACCACCTTCGCGCAATCTGAAACGCTATTTGCAGTTTTCCCTGCTGCTTTTGGC AGCGGGAGCGATTTATCCATTGCTCTACCTGCGCCAGAATTTTGAGACCAGCGTTCTGGCAGCATTTGGCATTTCTGCTG ACGAACTCGGCCAATTCTATTCCTTGCTCGGCATCATCTATGCGCTGAGTTATTTGCCGAGTGGCTGGTTGGCCGACCGG TTTTCACCGCGCCTGCTGATCTGTTTTTCATTGTCCGTGGTGGGTTTGCTGGGACTGTGGTTTTCGACCTATCCCGGCCC TGCCGCGCTGCGTTGGATTTTCATCGGTTGGGGCTTGGCGGCGGGGCTGACGTTCTGGGCCTCCCTGATCAAAGGCGTCA AGCTGTTGGCGCAGGCCTCTGAGCAGGGGCGTTTCTTCGGCATTCTGGATGGTGGGCGCGGCTTGATCGAAGCGCTGCTG GCGACTGCCGCCGTCGCCCTGTTTGCCATGGCCAGTGACGCAGCGCCACAGGCAGCGTTGCGCCCGGTCATTTATATGTA CTCCTTCACCTGCCTGGCGATTGCGTTATTGGTGTTGGTGTTTCTTGGGCAAGAACCTGCCGCCGCACCCGCTCCGACGA AAGTGCGCGGCGGACTTTGGCAAGACCTCAAAACACTCGCTGCGATACCCCGCTTGTGGCTCATGGCGCTGATCATTTTT TGCGGCTACCAGATATTTTGGGCGACATATTCTTTCTCCGCCTATTTACAACAGGGGTACGGCATGAGCGCAGTTGCCGC CGGCGTCATCACCGTCATCAAGCTATGGATGCGTCCTGTCGGAGGGATAGTCGGCGGGTTTCTGGGAGACCGCTGCGGCA ACGCGGCGACACTGGCCTGGAGCATGCTGTTGGCCGCGCTCGGCCTGACTGCGCTGATTCTTTTTCCGGCGGGCAGCGGC GTTTATTTTATGCTGACCCTCGTCATCCTGATCGGCGTGATGACCTATGCCATACGCGGTTTGTACTGGTCGCTGCTGGA GTCTTGCGCGGTGCCGGAAAAAATCACCGGCCTGGCCATCGGTATCGTCTCCGTCATCGCCTATTTGCCGGATATTTTCC TGCCCATGATCAACAGCGCCATCTCGTACCACTATCCCGGCCTGCCCGGCTACAAAATATATTTCGGCTACATCGTCGCC TGCGGATTGGGCGGCACGGCAGTCGCTTTCTACTTCAAAAACCTGACCCAACGAGAAAAGGTGCAGCAATGA
Upstream 100 bases:
>100_bases AGGACGCCATCATTATCGAAACCCCCGGTGGCGGCGGCTACGGGCCGGTTTCCCGCCAATCCACTGCATCACACAACGAG ACAACGACAGGAAAGAGTCC
Downstream 100 bases:
>100_bases AAATCATATCGATGAAATCCCATGTGGTTGCCGTGCCGCCGCCCTATATCGGCGGCATGTACTGGATTTTCGTCACCCTG AAAACCGCTTGCGGCATCGA
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MSSNTMLHAPPSRNLKRYLQFSLLLLAAGAIYPLLYLRQNFETSVLAAFGISADELGQFYSLLGIIYALSYLPSGWLADR FSPRLLICFSLSVVGLLGLWFSTYPGPAALRWIFIGWGLAAGLTFWASLIKGVKLLAQASEQGRFFGILDGGRGLIEALL ATAAVALFAMASDAAPQAALRPVIYMYSFTCLAIALLVLVFLGQEPAAAPAPTKVRGGLWQDLKTLAAIPRLWLMALIIF CGYQIFWATYSFSAYLQQGYGMSAVAAGVITVIKLWMRPVGGIVGGFLGDRCGNAATLAWSMLLAALGLTALILFPAGSG VYFMLTLVILIGVMTYAIRGLYWSLLESCAVPEKITGLAIGIVSVIAYLPDIFLPMINSAISYHYPGLPGYKIYFGYIVA CGLGGTAVAFYFKNLTQREKVQQ
Sequences:
>Translated_423_residues MSSNTMLHAPPSRNLKRYLQFSLLLLAAGAIYPLLYLRQNFETSVLAAFGISADELGQFYSLLGIIYALSYLPSGWLADR FSPRLLICFSLSVVGLLGLWFSTYPGPAALRWIFIGWGLAAGLTFWASLIKGVKLLAQASEQGRFFGILDGGRGLIEALL ATAAVALFAMASDAAPQAALRPVIYMYSFTCLAIALLVLVFLGQEPAAAPAPTKVRGGLWQDLKTLAAIPRLWLMALIIF CGYQIFWATYSFSAYLQQGYGMSAVAAGVITVIKLWMRPVGGIVGGFLGDRCGNAATLAWSMLLAALGLTALILFPAGSG VYFMLTLVILIGVMTYAIRGLYWSLLESCAVPEKITGLAIGIVSVIAYLPDIFLPMINSAISYHYPGLPGYKIYFGYIVA CGLGGTAVAFYFKNLTQREKVQQ >Mature_422_residues SSNTMLHAPPSRNLKRYLQFSLLLLAAGAIYPLLYLRQNFETSVLAAFGISADELGQFYSLLGIIYALSYLPSGWLADRF SPRLLICFSLSVVGLLGLWFSTYPGPAALRWIFIGWGLAAGLTFWASLIKGVKLLAQASEQGRFFGILDGGRGLIEALLA TAAVALFAMASDAAPQAALRPVIYMYSFTCLAIALLVLVFLGQEPAAAPAPTKVRGGLWQDLKTLAAIPRLWLMALIIFC GYQIFWATYSFSAYLQQGYGMSAVAAGVITVIKLWMRPVGGIVGGFLGDRCGNAATLAWSMLLAALGLTALILFPAGSGV YFMLTLVILIGVMTYAIRGLYWSLLESCAVPEKITGLAIGIVSVIAYLPDIFLPMINSAISYHYPGLPGYKIYFGYIVAC GLGGTAVAFYFKNLTQREKVQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1790306, Length=412, Percent_Identity=25.2427184466019, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI2367161, Length=377, Percent_Identity=30.2387267904509, Blast_Score=138, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45672; Mature: 45541
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNTMLHAPPSRNLKRYLQFSLLLLAAGAIYPLLYLRQNFETSVLAAFGISADELGQFY CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHH SLLGIIYALSYLPSGWLADRFSPRLLICFSLSVVGLLGLWFSTYPGPAALRWIFIGWGLA HHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AGLTFWASLIKGVKLLAQASEQGRFFGILDGGRGLIEALLATAAVALFAMASDAAPQAAL HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH RPVIYMYSFTCLAIALLVLVFLGQEPAAAPAPTKVRGGLWQDLKTLAAIPRLWLMALIIF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHH CGYQIFWATYSFSAYLQQGYGMSAVAAGVITVIKLWMRPVGGIVGGFLGDRCGNAATLAW HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH SMLLAALGLTALILFPAGSGVYFMLTLVILIGVMTYAIRGLYWSLLESCAVPEKITGLAI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GIVSVIAYLPDIFLPMINSAISYHYPGLPGYKIYFGYIVACGLGGTAVAFYFKNLTQREK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VQQ CCC >Mature Secondary Structure SSNTMLHAPPSRNLKRYLQFSLLLLAAGAIYPLLYLRQNFETSVLAAFGISADELGQFY CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHH SLLGIIYALSYLPSGWLADRFSPRLLICFSLSVVGLLGLWFSTYPGPAALRWIFIGWGLA HHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AGLTFWASLIKGVKLLAQASEQGRFFGILDGGRGLIEALLATAAVALFAMASDAAPQAAL HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH RPVIYMYSFTCLAIALLVLVFLGQEPAAAPAPTKVRGGLWQDLKTLAAIPRLWLMALIIF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHH CGYQIFWATYSFSAYLQQGYGMSAVAAGVITVIKLWMRPVGGIVGGFLGDRCGNAATLAW HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH SMLLAALGLTALILFPAGSGVYFMLTLVILIGVMTYAIRGLYWSLLESCAVPEKITGLAI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GIVSVIAYLPDIFLPMINSAISYHYPGLPGYKIYFGYIVACGLGGTAVAFYFKNLTQREK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VQQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]