| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609787
Identifier: 121609787
GI number: 121609787
Start: 3189353
End: 3189796
Strand: Direct
Name: 121609787
Synonym: Veis_2838
Alternate gene names: NA
Gene position: 3189353-3189796 (Clockwise)
Preceding gene: 121609784
Following gene: 121609796
Centisome position: 57.29
GC content: 66.89
Gene sequence:
>444_bases ATGGCCGCCATCCATATCACCGATATCGAAGCCGCGATCAACCACTGGCGCAGCCGTGCGCCGTCGCCCGACGGCATCAC GCTGGCGCCCGAGGTCCGGGCGCTCGCCGAGGTCTATGCGCTGATGGTTTACCGGCATCAGGATGAGGCCGCCGAAGACC GCTGGCCGCCGCAAGCGCTGGCCGCATGGCGGGCCTGGTACGACTCCACGCCCGATACGCCCTGCATCGCCATCTGTTCG ACCAGCCAGGGTGACGATCTTTGCAAGGGCTGCGGGCGCACTGTCGACGAAGTGCGGTGCTGGCCGGCAATGACCCCGGC GCAAAAGCGCATGGTGTGGCGCCGTATCACGCTCGAACACAAAGCCTGGCGTTTCAACCGCTATGCCGAGCGGGTGGCGC CGCAGGCATCGGTCGAGCCGGTCGTTTCAACCCCATCGGCCTGA
Upstream 100 bases:
>100_bases GTGTCGCGCTCCGGGTTGCGCACCCTGGATATGCCCGGAAGATCGCATGACCCCCGGGCAGTGACTGCCCGCCTTCCACC ACCACCGCCACCACCGCCCG
Downstream 100 bases:
>100_bases CGACGCCGTGGTCGCCGTGGTGTGGTGCCGCTGGCCGACGGGCACCGTCGATGGCATCACCGCCCAGGCTCCAACTCGGG TCTGGCAAAGCGGCGGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MAAIHITDIEAAINHWRSRAPSPDGITLAPEVRALAEVYALMVYRHQDEAAEDRWPPQALAAWRAWYDSTPDTPCIAICS TSQGDDLCKGCGRTVDEVRCWPAMTPAQKRMVWRRITLEHKAWRFNRYAERVAPQASVEPVVSTPSA
Sequences:
>Translated_147_residues MAAIHITDIEAAINHWRSRAPSPDGITLAPEVRALAEVYALMVYRHQDEAAEDRWPPQALAAWRAWYDSTPDTPCIAICS TSQGDDLCKGCGRTVDEVRCWPAMTPAQKRMVWRRITLEHKAWRFNRYAERVAPQASVEPVVSTPSA >Mature_146_residues AAIHITDIEAAINHWRSRAPSPDGITLAPEVRALAEVYALMVYRHQDEAAEDRWPPQALAAWRAWYDSTPDTPCIAICST SQGDDLCKGCGRTVDEVRCWPAMTPAQKRMVWRRITLEHKAWRFNRYAERVAPQASVEPVVSTPSA
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16559; Mature: 16428
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAIHITDIEAAINHWRSRAPSPDGITLAPEVRALAEVYALMVYRHQDEAAEDRWPPQAL CCEEEECHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHH AAWRAWYDSTPDTPCIAICSTSQGDDLCKGCGRTVDEVRCWPAMTPAQKRMVWRRITLEH HHHHHHHCCCCCCCEEEEECCCCCHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH KAWRFNRYAERVAPQASVEPVVSTPSA HHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure AAIHITDIEAAINHWRSRAPSPDGITLAPEVRALAEVYALMVYRHQDEAAEDRWPPQAL CEEEECHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHH AAWRAWYDSTPDTPCIAICSTSQGDDLCKGCGRTVDEVRCWPAMTPAQKRMVWRRITLEH HHHHHHHCCCCCCCEEEEECCCCCHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH KAWRFNRYAERVAPQASVEPVVSTPSA HHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA