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The map label for this gene is ppdD [C]

Identifier: 121609776

GI number: 121609776

Start: 3178065

End: 3178643

Strand: Direct

Name: ppdD [C]

Synonym: Veis_2827

Alternate gene names: 121609776

Gene position: 3178065-3178643 (Clockwise)

Preceding gene: 121609775

Following gene: 121609777

Centisome position: 57.09

GC content: 56.65

Gene sequence:

>579_bases
ATGATGAAACGCCATACCGGCAAAGGCCGGGACCACGGCTTCACGTTGATCGAACTGATGGTCACCATCGCGCTCGTGGC
GGTGATGATGACGCTCGCGGCACCCAGCTTCGTTCAATATCTGCGCAATTCCGAGCTTACATCGCTGACCAACACGCTTT
TGGCCGCCATCAATGCCGCCAAGAGCGAGGCCATGAAATCCGGCAAAAGTGCTTTCGTCCAGCCACTTGGCACGGGATGG
GCAAGCGGTTGGGTCGTCTATGTCAACCGTGAAAAACAAAGCAACCCCGGCATGGCTACCATCGTGCAAAAACAGGAACC
CGTGAAGTCTTATTTCAGCATCGCGGGAAACGGTACTGCCGGTGAATCCGGTCCGTATATCAGGTTCGATAGTTCCGGGT
ACTCTGTCACCACCGGCGGGGCGCCTGCAGCTTTGACCCTGACGATCCAACGGACCGACACAGACAGTGCGTCGGAGATA
CGGCACATCATCGTGGCACGGACCGGCAGGGTAAGGGCATGCAAACCGAAATTGAGCGCCAATAACAACAATGTCGTCAA
TGCCGGTCCGGACTGCTAG

Upstream 100 bases:

>100_bases
CCTCTCCGAGACAAGCCGATCCGGAAGTGGGAGATCTGACGATGACCAGTATCGGCGAGAAAAGCTGTACGGGTTCGGTC
CCCCGCCTGTGCTGGCCCTC

Downstream 100 bases:

>100_bases
TGTCGCGTCATCGGTCAGATGTCGCAGGCTGCGCGCAGCCATCGGAGCGCAGCGCAAGGCGCATCGCGCAGCCCATACCG
AGCTGTATTGGCAAGCGATG

Product: Tfp pilus assembly protein

Products: NA

Alternate protein names: Type IV Pilus Assembly Protein Fimt; Type IV Pilus Assembly Protein FimT; Tfp Pilus Assembly Protein; Tfp Pilus Assembly Protein FimT; Methylation

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MMKRHTGKGRDHGFTLIELMVTIALVAVMMTLAAPSFVQYLRNSELTSLTNTLLAAINAAKSEAMKSGKSAFVQPLGTGW
ASGWVVYVNREKQSNPGMATIVQKQEPVKSYFSIAGNGTAGESGPYIRFDSSGYSVTTGGAPAALTLTIQRTDTDSASEI
RHIIVARTGRVRACKPKLSANNNNVVNAGPDC

Sequences:

>Translated_192_residues
MMKRHTGKGRDHGFTLIELMVTIALVAVMMTLAAPSFVQYLRNSELTSLTNTLLAAINAAKSEAMKSGKSAFVQPLGTGW
ASGWVVYVNREKQSNPGMATIVQKQEPVKSYFSIAGNGTAGESGPYIRFDSSGYSVTTGGAPAALTLTIQRTDTDSASEI
RHIIVARTGRVRACKPKLSANNNNVVNAGPDC
>Mature_192_residues
MMKRHTGKGRDHGFTLIELMVTIALVAVMMTLAAPSFVQYLRNSELTSLTNTLLAAINAAKSEAMKSGKSAFVQPLGTGW
ASGWVVYVNREKQSNPGMATIVQKQEPVKSYFSIAGNGTAGESGPYIRFDSSGYSVTTGGAPAALTLTIQRTDTDSASEI
RHIIVARTGRVRACKPKLSANNNNVVNAGPDC

Specific function: Not Yet Known. [C]

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20425; Mature: 20425

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKRHTGKGRDHGFTLIELMVTIALVAVMMTLAAPSFVQYLRNSELTSLTNTLLAAINAA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHH
KSEAMKSGKSAFVQPLGTGWASGWVVYVNREKQSNPGMATIVQKQEPVKSYFSIAGNGTA
HHHHHHCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHHCCCCCC
GESGPYIRFDSSGYSVTTGGAPAALTLTIQRTDTDSASEIRHIIVARTGRVRACKPKLSA
CCCCCEEEECCCCCEEECCCCCEEEEEEEEECCCCCHHHHHHHEEECCCCCEECCCCCCC
NNNNVVNAGPDC
CCCCEEECCCCC
>Mature Secondary Structure
MMKRHTGKGRDHGFTLIELMVTIALVAVMMTLAAPSFVQYLRNSELTSLTNTLLAAINAA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHH
KSEAMKSGKSAFVQPLGTGWASGWVVYVNREKQSNPGMATIVQKQEPVKSYFSIAGNGTA
HHHHHHCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHHCCCCCC
GESGPYIRFDSSGYSVTTGGAPAALTLTIQRTDTDSASEIRHIIVARTGRVRACKPKLSA
CCCCCEEEECCCCCEEECCCCCEEEEEEEEECCCCCHHHHHHHEEECCCCCEECCCCCCC
NNNNVVNAGPDC
CCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA