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The map label for this gene is deoC [H]

Identifier: 121609641

GI number: 121609641

Start: 3032514

End: 3033473

Strand: Direct

Name: deoC [H]

Synonym: Veis_2688

Alternate gene names: 121609641

Gene position: 3032514-3033473 (Clockwise)

Preceding gene: 121609640

Following gene: 121609642

Centisome position: 54.48

GC content: 69.58

Gene sequence:

>960_bases
ATGACTGCCACCGACCTCCGCAACCCGGGCATCGCACTCGATGCCTCCCTGTTCGAGCATGCGCGAGTGAACACACCGGC
CGCGCAGCGCCGCGCCGAATCCCTGAAGGCCCGCCGTTCGGTGAAGAAGCAATGGCAGGCCGCCTGGCTGGTCAAGGCCA
TCACCTGCATCGACCTCACCACGCTGGCGGGCGACGACACGCCGCAGCGCGTGGCCCGCCTGTGCGCGAAGGCGCGCAGC
CCGCTGCGCCAGGACCTCGTGGCCGGCCTGGGCCTGGAGGCGGCACCGCCCCGCGTGGGTGCCGTCTGCGTGTATCCGAG
CATGGTGCCCGCCGCGGTGCGCGCGCTCGAAGGCTCGGGCATTCCGGTGGCCTCGGTGGCCGCCGGGTTTCCCTCGGGCC
TCACGCCGCTGCGCGAACGCCTGGCCGAGATCGACTACGCGGTGCAGGAAGGGGCGGGCGAGATCGACATCGTCATCACC
CGCGCCCACGTGCTGAGCCAGAACTGGCAGGCGCTGTACGAAGAAATCCAGGCCATGCGCGCGCGCTGCGGCGCGGCACA
CATGAAGGCCATCCTGGCCACGGGCGACCTGAAGACCCTGCGCAATGTCTACCAGGCCAGCATGGTGGCCATGATGGCCG
GCGCCGACGTCATCAAGACTTCCACCGGCAAGGAAGAGGTGAATGCCACGCTGCCGGTGGGCCTCGTGATGTGCCGCGCC
ATCCGCGACTACCGCAGCGCCACCGGCCACGACATCGGTTTCAAGCCCGCCGGCGGCATCCGCACCGCCAAGGATGCGCT
GAACTGGCTCGCACTGATGAACGAAGAGCTGGGCCGCGCATGGCTGGAGCCCGGCATGTTCCGCATCGGCGCCAGCGCAC
TGCTCGGCGACATCGAGCGCCAGCTCGAGCACTTCGTCACCGGTCGCTATTCGGCCCTGCATCACCACGCCATGGCCTGA

Upstream 100 bases:

>100_bases
CACCGGCGTGATCATCGTTCTTGCCATCCTTCTGAACCGGCTCATTGACCACCACTCCGGTCGCAGCCACTGAGCTTTTT
CTTCACACGCTCCCCAACCC

Downstream 100 bases:

>100_bases
GCCTGGCGCCCGCACCACCTTCACGGCACCGACCGCGCAACCTCTTTTTCATCATGACCACTGTGGCCGACATTCTCCGC
ACCATGGACTACGGTCCCTG

Product: deoxyribose-phosphate aldolase

Products: NA

Alternate protein names: Phosphodeoxyriboaldolase; DERA; Deoxyriboaldolase [H]

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MTATDLRNPGIALDASLFEHARVNTPAAQRRAESLKARRSVKKQWQAAWLVKAITCIDLTTLAGDDTPQRVARLCAKARS
PLRQDLVAGLGLEAAPPRVGAVCVYPSMVPAAVRALEGSGIPVASVAAGFPSGLTPLRERLAEIDYAVQEGAGEIDIVIT
RAHVLSQNWQALYEEIQAMRARCGAAHMKAILATGDLKTLRNVYQASMVAMMAGADVIKTSTGKEEVNATLPVGLVMCRA
IRDYRSATGHDIGFKPAGGIRTAKDALNWLALMNEELGRAWLEPGMFRIGASALLGDIERQLEHFVTGRYSALHHHAMA

Sequences:

>Translated_319_residues
MTATDLRNPGIALDASLFEHARVNTPAAQRRAESLKARRSVKKQWQAAWLVKAITCIDLTTLAGDDTPQRVARLCAKARS
PLRQDLVAGLGLEAAPPRVGAVCVYPSMVPAAVRALEGSGIPVASVAAGFPSGLTPLRERLAEIDYAVQEGAGEIDIVIT
RAHVLSQNWQALYEEIQAMRARCGAAHMKAILATGDLKTLRNVYQASMVAMMAGADVIKTSTGKEEVNATLPVGLVMCRA
IRDYRSATGHDIGFKPAGGIRTAKDALNWLALMNEELGRAWLEPGMFRIGASALLGDIERQLEHFVTGRYSALHHHAMA
>Mature_318_residues
TATDLRNPGIALDASLFEHARVNTPAAQRRAESLKARRSVKKQWQAAWLVKAITCIDLTTLAGDDTPQRVARLCAKARSP
LRQDLVAGLGLEAAPPRVGAVCVYPSMVPAAVRALEGSGIPVASVAAGFPSGLTPLRERLAEIDYAVQEGAGEIDIVITR
AHVLSQNWQALYEEIQAMRARCGAAHMKAILATGDLKTLRNVYQASMVAMMAGADVIKTSTGKEEVNATLPVGLVMCRAI
RDYRSATGHDIGFKPAGGIRTAKDALNWLALMNEELGRAWLEPGMFRIGASALLGDIERQLEHFVTGRYSALHHHAMA

Specific function: Nucleotide and deoxyribonucleotide catabolism. [C]

COG id: COG0274

COG function: function code F; Deoxyribose-phosphate aldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family. DeoC type 2 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116063554, Length=314, Percent_Identity=60.828025477707, Blast_Score=389, Evalue=1e-108,
Organism=Escherichia coli, GI1790841, Length=244, Percent_Identity=36.0655737704918, Blast_Score=139, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17533015, Length=255, Percent_Identity=47.843137254902, Blast_Score=238, Evalue=2e-63,
Organism=Drosophila melanogaster, GI19922098, Length=311, Percent_Identity=45.6591639871383, Blast_Score=254, Evalue=7e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011343
- InterPro:   IPR002915 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: =4.1.2.4 [H]

Molecular weight: Translated: 34309; Mature: 34178

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATDLRNPGIALDASLFEHARVNTPAAQRRAESLKARRSVKKQWQAAWLVKAITCIDLT
CCCCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLAGDDTPQRVARLCAKARSPLRQDLVAGLGLEAAPPRVGAVCVYPSMVPAAVRALEGSG
HHCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHCCCC
IPVASVAAGFPSGLTPLRERLAEIDYAVQEGAGEIDIVITRAHVLSQNWQALYEEIQAMR
CCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
ARCGAAHMKAILATGDLKTLRNVYQASMVAMMAGADVIKTSTGKEEVNATLPVGLVMCRA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHCCCCHHHHHHHHH
IRDYRSATGHDIGFKPAGGIRTAKDALNWLALMNEELGRAWLEPGMFRIGASALLGDIER
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QLEHFVTGRYSALHHHAMA
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TATDLRNPGIALDASLFEHARVNTPAAQRRAESLKARRSVKKQWQAAWLVKAITCIDLT
CCCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLAGDDTPQRVARLCAKARSPLRQDLVAGLGLEAAPPRVGAVCVYPSMVPAAVRALEGSG
HHCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHCCCC
IPVASVAAGFPSGLTPLRERLAEIDYAVQEGAGEIDIVITRAHVLSQNWQALYEEIQAMR
CCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
ARCGAAHMKAILATGDLKTLRNVYQASMVAMMAGADVIKTSTGKEEVNATLPVGLVMCRA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHCCCCHHHHHHHHH
IRDYRSATGHDIGFKPAGGIRTAKDALNWLALMNEELGRAWLEPGMFRIGASALLGDIER
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QLEHFVTGRYSALHHHAMA
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA