Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is yedA [C]

Identifier: 121609518

GI number: 121609518

Start: 2893832

End: 2894728

Strand: Direct

Name: yedA [C]

Synonym: Veis_2562

Alternate gene names: 121609518

Gene position: 2893832-2894728 (Clockwise)

Preceding gene: 121609517

Following gene: 121609520

Centisome position: 51.98

GC content: 69.34

Gene sequence:

>897_bases
ATGTCGGCCTGGATCGGTGAATACACCCTGCTGGCAGCGTTGTGGGGCGCGTCCTTTTTGTTCATGCGGCTGGGGGCGGC
CGAATTCGGCCCCTTGCCCACCGCAGGGCTGCGCGTAGCGCTGGCCGCCGTATTCCTGTGGCCGGTCTTGCTGCACCAGG
GTCACTGGCACCTGCTGCGGCGGCATTGGCGTCCGATCATGCTGGCGGGCCTGCTCAACTCGGCCATCCCCTTTGCACTG
TTTGCCTGGGCCGTGATGCACATCACCACCGGCCTGACCTCCGTCCTGAACGCCACGGCGCCGCTGTTTGGCGCGCTGGT
GGCCTGGGCCTGGCTGGGCGAGCGCATCGATCGCCTGCGCTGGGCCGGCCTGGCGCTCGGTTTTGTCGGCGTGGTGCTGC
TGGCCTGGCGCACACCGGAGGGTGCGGGGCCGAAGACCGGACAGGCCGATTGGGCGATGGCCGCCTGCCTGCTGGCCACC
GGCTGTTATGGCCTGGCGGCCAGCTTTGCACGGCGCTACCTCAGCGGCATAGCGCCACTGGCCATCGCCACCGGCAGCCA
GTTGGGCGCGGCACTGGGCCTGGCCCTGCCCACCTGCTGGCTGTGGCCCGCCCAAACGCCCGGCCCACGCGCCTGGGCAG
CGATTGCCGTGGTTGCCGTGTTGTGCACCTCGATTGCCTACACCCTGTACTTTCGCCTGATCGCCCACGCAGGCCCGAGC
CGGGCCATCACCGTGACCCTGGTGGCCCCCGTGTTCGCCGTGCTCTACGGGGCCTTGTTCTTCGGCGAAGCCATCACACT
GTGGATGGCAGGCTGCGCGCTGATGATCGTCTGCGGAACGCTGCTGTCGACCGGGCTCGTCGACGCGCTGCGGGGCAGTC
CGCTCCGATCCCGATGA

Upstream 100 bases:

>100_bases
GCCTGGAGCGCAAGACCGCCCTGCTGACCCTGGACGATGCGCCCCACCCACATCCAGGCCCGCACCAAGGAAACGCATGA
ACGGCCCGGGAACCCGCGCC

Downstream 100 bases:

>100_bases
CGCGGACTTTGCGTTCGCGCTGACCCTCGACCGGCAACCGGCCCGCCGCGCCCGGATCAATACCTGCCCCCGCCACGACC
CTTGCGCGCCCGCAGGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSAWIGEYTLLAALWGASFLFMRLGAAEFGPLPTAGLRVALAAVFLWPVLLHQGHWHLLRRHWRPIMLAGLLNSAIPFAL
FAWAVMHITTGLTSVLNATAPLFGALVAWAWLGERIDRLRWAGLALGFVGVVLLAWRTPEGAGPKTGQADWAMAACLLAT
GCYGLAASFARRYLSGIAPLAIATGSQLGAALGLALPTCWLWPAQTPGPRAWAAIAVVAVLCTSIAYTLYFRLIAHAGPS
RAITVTLVAPVFAVLYGALFFGEAITLWMAGCALMIVCGTLLSTGLVDALRGSPLRSR

Sequences:

>Translated_298_residues
MSAWIGEYTLLAALWGASFLFMRLGAAEFGPLPTAGLRVALAAVFLWPVLLHQGHWHLLRRHWRPIMLAGLLNSAIPFAL
FAWAVMHITTGLTSVLNATAPLFGALVAWAWLGERIDRLRWAGLALGFVGVVLLAWRTPEGAGPKTGQADWAMAACLLAT
GCYGLAASFARRYLSGIAPLAIATGSQLGAALGLALPTCWLWPAQTPGPRAWAAIAVVAVLCTSIAYTLYFRLIAHAGPS
RAITVTLVAPVFAVLYGALFFGEAITLWMAGCALMIVCGTLLSTGLVDALRGSPLRSR
>Mature_297_residues
SAWIGEYTLLAALWGASFLFMRLGAAEFGPLPTAGLRVALAAVFLWPVLLHQGHWHLLRRHWRPIMLAGLLNSAIPFALF
AWAVMHITTGLTSVLNATAPLFGALVAWAWLGERIDRLRWAGLALGFVGVVLLAWRTPEGAGPKTGQADWAMAACLLATG
CYGLAASFARRYLSGIAPLAIATGSQLGAALGLALPTCWLWPAQTPGPRAWAAIAVVAVLCTSIAYTLYFRLIAHAGPSR
AITVTLVAPVFAVLYGALFFGEAITLWMAGCALMIVCGTLLSTGLVDALRGSPLRSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31633; Mature: 31502

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAWIGEYTLLAALWGASFLFMRLGAAEFGPLPTAGLRVALAAVFLWPVLLHQGHWHLLR
CCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
RHWRPIMLAGLLNSAIPFALFAWAVMHITTGLTSVLNATAPLFGALVAWAWLGERIDRLR
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAGLALGFVGVVLLAWRTPEGAGPKTGQADWAMAACLLATGCYGLAASFARRYLSGIAPL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AIATGSQLGAALGLALPTCWLWPAQTPGPRAWAAIAVVAVLCTSIAYTLYFRLIAHAGPS
HHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RAITVTLVAPVFAVLYGALFFGEAITLWMAGCALMIVCGTLLSTGLVDALRGSPLRSR
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SAWIGEYTLLAALWGASFLFMRLGAAEFGPLPTAGLRVALAAVFLWPVLLHQGHWHLLR
CCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
RHWRPIMLAGLLNSAIPFALFAWAVMHITTGLTSVLNATAPLFGALVAWAWLGERIDRLR
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAGLALGFVGVVLLAWRTPEGAGPKTGQADWAMAACLLATGCYGLAASFARRYLSGIAPL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AIATGSQLGAALGLALPTCWLWPAQTPGPRAWAAIAVVAVLCTSIAYTLYFRLIAHAGPS
HHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RAITVTLVAPVFAVLYGALFFGEAITLWMAGCALMIVCGTLLSTGLVDALRGSPLRSR
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA