| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is yedA [C]
Identifier: 121609518
GI number: 121609518
Start: 2893832
End: 2894728
Strand: Direct
Name: yedA [C]
Synonym: Veis_2562
Alternate gene names: 121609518
Gene position: 2893832-2894728 (Clockwise)
Preceding gene: 121609517
Following gene: 121609520
Centisome position: 51.98
GC content: 69.34
Gene sequence:
>897_bases ATGTCGGCCTGGATCGGTGAATACACCCTGCTGGCAGCGTTGTGGGGCGCGTCCTTTTTGTTCATGCGGCTGGGGGCGGC CGAATTCGGCCCCTTGCCCACCGCAGGGCTGCGCGTAGCGCTGGCCGCCGTATTCCTGTGGCCGGTCTTGCTGCACCAGG GTCACTGGCACCTGCTGCGGCGGCATTGGCGTCCGATCATGCTGGCGGGCCTGCTCAACTCGGCCATCCCCTTTGCACTG TTTGCCTGGGCCGTGATGCACATCACCACCGGCCTGACCTCCGTCCTGAACGCCACGGCGCCGCTGTTTGGCGCGCTGGT GGCCTGGGCCTGGCTGGGCGAGCGCATCGATCGCCTGCGCTGGGCCGGCCTGGCGCTCGGTTTTGTCGGCGTGGTGCTGC TGGCCTGGCGCACACCGGAGGGTGCGGGGCCGAAGACCGGACAGGCCGATTGGGCGATGGCCGCCTGCCTGCTGGCCACC GGCTGTTATGGCCTGGCGGCCAGCTTTGCACGGCGCTACCTCAGCGGCATAGCGCCACTGGCCATCGCCACCGGCAGCCA GTTGGGCGCGGCACTGGGCCTGGCCCTGCCCACCTGCTGGCTGTGGCCCGCCCAAACGCCCGGCCCACGCGCCTGGGCAG CGATTGCCGTGGTTGCCGTGTTGTGCACCTCGATTGCCTACACCCTGTACTTTCGCCTGATCGCCCACGCAGGCCCGAGC CGGGCCATCACCGTGACCCTGGTGGCCCCCGTGTTCGCCGTGCTCTACGGGGCCTTGTTCTTCGGCGAAGCCATCACACT GTGGATGGCAGGCTGCGCGCTGATGATCGTCTGCGGAACGCTGCTGTCGACCGGGCTCGTCGACGCGCTGCGGGGCAGTC CGCTCCGATCCCGATGA
Upstream 100 bases:
>100_bases GCCTGGAGCGCAAGACCGCCCTGCTGACCCTGGACGATGCGCCCCACCCACATCCAGGCCCGCACCAAGGAAACGCATGA ACGGCCCGGGAACCCGCGCC
Downstream 100 bases:
>100_bases CGCGGACTTTGCGTTCGCGCTGACCCTCGACCGGCAACCGGCCCGCCGCGCCCGGATCAATACCTGCCCCCGCCACGACC CTTGCGCGCCCGCAGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSAWIGEYTLLAALWGASFLFMRLGAAEFGPLPTAGLRVALAAVFLWPVLLHQGHWHLLRRHWRPIMLAGLLNSAIPFAL FAWAVMHITTGLTSVLNATAPLFGALVAWAWLGERIDRLRWAGLALGFVGVVLLAWRTPEGAGPKTGQADWAMAACLLAT GCYGLAASFARRYLSGIAPLAIATGSQLGAALGLALPTCWLWPAQTPGPRAWAAIAVVAVLCTSIAYTLYFRLIAHAGPS RAITVTLVAPVFAVLYGALFFGEAITLWMAGCALMIVCGTLLSTGLVDALRGSPLRSR
Sequences:
>Translated_298_residues MSAWIGEYTLLAALWGASFLFMRLGAAEFGPLPTAGLRVALAAVFLWPVLLHQGHWHLLRRHWRPIMLAGLLNSAIPFAL FAWAVMHITTGLTSVLNATAPLFGALVAWAWLGERIDRLRWAGLALGFVGVVLLAWRTPEGAGPKTGQADWAMAACLLAT GCYGLAASFARRYLSGIAPLAIATGSQLGAALGLALPTCWLWPAQTPGPRAWAAIAVVAVLCTSIAYTLYFRLIAHAGPS RAITVTLVAPVFAVLYGALFFGEAITLWMAGCALMIVCGTLLSTGLVDALRGSPLRSR >Mature_297_residues SAWIGEYTLLAALWGASFLFMRLGAAEFGPLPTAGLRVALAAVFLWPVLLHQGHWHLLRRHWRPIMLAGLLNSAIPFALF AWAVMHITTGLTSVLNATAPLFGALVAWAWLGERIDRLRWAGLALGFVGVVLLAWRTPEGAGPKTGQADWAMAACLLATG CYGLAASFARRYLSGIAPLAIATGSQLGAALGLALPTCWLWPAQTPGPRAWAAIAVVAVLCTSIAYTLYFRLIAHAGPSR AITVTLVAPVFAVLYGALFFGEAITLWMAGCALMIVCGTLLSTGLVDALRGSPLRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31633; Mature: 31502
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAWIGEYTLLAALWGASFLFMRLGAAEFGPLPTAGLRVALAAVFLWPVLLHQGHWHLLR CCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH RHWRPIMLAGLLNSAIPFALFAWAVMHITTGLTSVLNATAPLFGALVAWAWLGERIDRLR HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WAGLALGFVGVVLLAWRTPEGAGPKTGQADWAMAACLLATGCYGLAASFARRYLSGIAPL HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AIATGSQLGAALGLALPTCWLWPAQTPGPRAWAAIAVVAVLCTSIAYTLYFRLIAHAGPS HHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RAITVTLVAPVFAVLYGALFFGEAITLWMAGCALMIVCGTLLSTGLVDALRGSPLRSR CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SAWIGEYTLLAALWGASFLFMRLGAAEFGPLPTAGLRVALAAVFLWPVLLHQGHWHLLR CCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH RHWRPIMLAGLLNSAIPFALFAWAVMHITTGLTSVLNATAPLFGALVAWAWLGERIDRLR HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WAGLALGFVGVVLLAWRTPEGAGPKTGQADWAMAACLLATGCYGLAASFARRYLSGIAPL HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AIATGSQLGAALGLALPTCWLWPAQTPGPRAWAAIAVVAVLCTSIAYTLYFRLIAHAGPS HHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RAITVTLVAPVFAVLYGALFFGEAITLWMAGCALMIVCGTLLSTGLVDALRGSPLRSR CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA