| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is 121609379
Identifier: 121609379
GI number: 121609379
Start: 2738304
End: 2739308
Strand: Direct
Name: 121609379
Synonym: Veis_2422
Alternate gene names: NA
Gene position: 2738304-2739308 (Clockwise)
Preceding gene: 121609378
Following gene: 121609380
Centisome position: 49.19
GC content: 50.85
Gene sequence:
>1005_bases ATGAGTAAACTGCCCCGCGGTGAAATAATCCTTTATCCGCGCGGCGATGGTTCGCCGTCCATTGAAGTTCATCTTGAAGG AGACACTGTCTGGCTGACCCAAGACCAGATGGCGGATTTATTTGGCAGAGCCAAATCGACGATCAACGAGCACATTAAGA ATGTTTTCGCAGAACGTGAGCTGGTTGAAGAACAGGTCATGAGAAAATTCGGAAATTCCGAATTTTCTACCAAACCAACC AATGTCTACAACCTGGATGTCATCATCTCCGTTGGCTACCGGGTGAAATCGCCGCAAGGCACCCAGTTTCGCATCTGGGC AACTGAGCGCTTGCGGGAATACCTTGTCAAGGGTTTCGCGATGGACGATGCCCGGCTAAAGAACCTTGGGGGTGGAAACT ATTGGAAAGAGCTGCTTGACCGCGTTCGTGACATCCGCAGCAGTGAGAAGGTGCTCTATCGGCAAGTGCTTGATCTGTAT GCCACCAGCGTAGATTACAATGCAAAAAGCGAGGAAAGCACGCTCTTTTTCAAGACAGTGCAAAATAAGTTGCACTATGC AGCCCACGGTCAAACTGCCGCCGAGGTGATCACTGCACGAGCAGATGCGGGAAAACCCTTCATGGGGCTACTCTCGTTCA GTGGCAAGCAACCAACAAAAAACGACATCGGCATTGCGAAAAACTATTTGGATGCGGGCGAGTTGAAACGCTTGAACACC TTGGTTTCAGCTTATTTTGATGCTGCCGAATTCCGTGCACAAAGCCGCACGCCTACCTACATGAAGGACTGGCTCGCACA CCTTGATCGGCTGATCGTTGCGTTGGAAGCCAAGACGCTCGAAGGACTTGGCAGCGTCAGCCACCAGCAAGCCACCACCC ATGCAGAAAACGAGTATGCAAAATATCGTGCGCAGTTGGTCACCGAACCTTCCGAAGTCGAAGCAACGTATCTGGAAACG GTGAAACGCGCGCAGCGCAAGATTGAGGGTAAGAAAAAATCATGA
Upstream 100 bases:
>100_bases TCCAGGCGCTCAATGCCAAGATCGCCCGCATCGTGGGGCGGCAGGCGGAGTTGCGAACGCAGATCGATGCCATCGTCGCG GACCTGGAAGGAGAAACGGC
Downstream 100 bases:
>100_bases GCCGAATTGATGAGTTGATTGCCGAGCACTGTCCAAATGGCGTGGAGTTCAAGCCGCTTGGTGAGTGCATATCCAAAAAT CTTGGTGGCGGTACCCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSKLPRGEIILYPRGDGSPSIEVHLEGDTVWLTQDQMADLFGRAKSTINEHIKNVFAERELVEEQVMRKFGNSEFSTKPT NVYNLDVIISVGYRVKSPQGTQFRIWATERLREYLVKGFAMDDARLKNLGGGNYWKELLDRVRDIRSSEKVLYRQVLDLY ATSVDYNAKSEESTLFFKTVQNKLHYAAHGQTAAEVITARADAGKPFMGLLSFSGKQPTKNDIGIAKNYLDAGELKRLNT LVSAYFDAAEFRAQSRTPTYMKDWLAHLDRLIVALEAKTLEGLGSVSHQQATTHAENEYAKYRAQLVTEPSEVEATYLET VKRAQRKIEGKKKS
Sequences:
>Translated_334_residues MSKLPRGEIILYPRGDGSPSIEVHLEGDTVWLTQDQMADLFGRAKSTINEHIKNVFAERELVEEQVMRKFGNSEFSTKPT NVYNLDVIISVGYRVKSPQGTQFRIWATERLREYLVKGFAMDDARLKNLGGGNYWKELLDRVRDIRSSEKVLYRQVLDLY ATSVDYNAKSEESTLFFKTVQNKLHYAAHGQTAAEVITARADAGKPFMGLLSFSGKQPTKNDIGIAKNYLDAGELKRLNT LVSAYFDAAEFRAQSRTPTYMKDWLAHLDRLIVALEAKTLEGLGSVSHQQATTHAENEYAKYRAQLVTEPSEVEATYLET VKRAQRKIEGKKKS >Mature_333_residues SKLPRGEIILYPRGDGSPSIEVHLEGDTVWLTQDQMADLFGRAKSTINEHIKNVFAERELVEEQVMRKFGNSEFSTKPTN VYNLDVIISVGYRVKSPQGTQFRIWATERLREYLVKGFAMDDARLKNLGGGNYWKELLDRVRDIRSSEKVLYRQVLDLYA TSVDYNAKSEESTLFFKTVQNKLHYAAHGQTAAEVITARADAGKPFMGLLSFSGKQPTKNDIGIAKNYLDAGELKRLNTL VSAYFDAAEFRAQSRTPTYMKDWLAHLDRLIVALEAKTLEGLGSVSHQQATTHAENEYAKYRAQLVTEPSEVEATYLETV KRAQRKIEGKKKS
Specific function: Unknown
COG id: COG3943
COG function: function code R; Virulence protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37856; Mature: 37725
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLPRGEIILYPRGDGSPSIEVHLEGDTVWLTQDQMADLFGRAKSTINEHIKNVFAERE CCCCCCCCEEEEECCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH LVEEQVMRKFGNSEFSTKPTNVYNLDVIISVGYRVKSPQGTQFRIWATERLREYLVKGFA HHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECEEECCCCCCEEEEEHHHHHHHHHHHCCC MDDARLKNLGGGNYWKELLDRVRDIRSSEKVLYRQVLDLYATSVDYNAKSEESTLFFKTV CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH QNKLHYAAHGQTAAEVITARADAGKPFMGLLSFSGKQPTKNDIGIAKNYLDAGELKRLNT HHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHH LVSAYFDAAEFRAQSRTPTYMKDWLAHLDRLIVALEAKTLEGLGSVSHQQATTHAENEYA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH KYRAQLVTEPSEVEATYLETVKRAQRKIEGKKKS HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SKLPRGEIILYPRGDGSPSIEVHLEGDTVWLTQDQMADLFGRAKSTINEHIKNVFAERE CCCCCCCEEEEECCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH LVEEQVMRKFGNSEFSTKPTNVYNLDVIISVGYRVKSPQGTQFRIWATERLREYLVKGFA HHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECEEECCCCCCEEEEEHHHHHHHHHHHCCC MDDARLKNLGGGNYWKELLDRVRDIRSSEKVLYRQVLDLYATSVDYNAKSEESTLFFKTV CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH QNKLHYAAHGQTAAEVITARADAGKPFMGLLSFSGKQPTKNDIGIAKNYLDAGELKRLNT HHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHH LVSAYFDAAEFRAQSRTPTYMKDWLAHLDRLIVALEAKTLEGLGSVSHQQATTHAENEYA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH KYRAQLVTEPSEVEATYLETVKRAQRKIEGKKKS HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA