| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is mlaA [H]
Identifier: 121609357
GI number: 121609357
Start: 2717712
End: 2718557
Strand: Direct
Name: mlaA [H]
Synonym: Veis_2400
Alternate gene names: 121609357
Gene position: 2717712-2718557 (Clockwise)
Preceding gene: 121609356
Following gene: 121609358
Centisome position: 48.82
GC content: 67.02
Gene sequence:
>846_bases ATGACGCACTCAAACCTCGCGGCACATGGGGGTTGCACAGCACGGCAGACCGCGCTGTCAGATGCCTTGCGGCAGACCGT GCCGTCCGGCGCCCCACGGTGGACGGCGCTGCCCGGCATATCCCGCTGGGTCGTGCTGCTCGGCGCAGCAGTGCTGGCCG GCTGCGCCACCGTTGCCCAGCCGGACCCGCGCGATCCGCTGCAGGGCTACAACCGCAGCATGGCCCAGTTCAACGAGCAT CTCGATACGATGGTCCTCAAGCCGGTGGCAACGGCCTACCGCGAGGTCACGCCGGCGCCGGTGCGCACCGGCGTGAGCAA CTTCTTTGCAAACATCGGCGACATCTGGTCGTTCGTGAACAACCTGCTGCAACTGCGCGGCGAGGCAGCGGCAGCCAGTT TCATGCGGGTCAATGTGAACACCTTCCTGGGCCTGGGCGGGCTGCTGGACATTGCCAGCGAACTGAACATCGAGCGCCAC AAGCAGGACTTTGGCCTGACGCTGGGGCATTGGGGCGTGGGTACGGGGCCGTATCTGGTGCTGCCGCTTCTGGGGCCGTC GACGCTGCGCGACAGCCTGGCGCTGTCGGTGGACATCAGGGGCAATGCGCTGCACCACCTGGAGTCGGCCTCGGCGCGCC AATCGCTGTACCTGCTGCGCACGGTGGAAATGCGCGCCAACCTGTTGCGCGCGGGCGCCGTGCTCGACAGCGCCGCGCTC GACAAGTACAGTTTCACGCGCGATGTGTTCCTGCAGGTGCGCGGCCAAGCCGCCGAGGCCAACGGCATGGATGACGAGGA CGCCGACAACCCATCCAGCGAGGGCATGTTGCCCGAAGAGCCTTGA
Upstream 100 bases:
>100_bases CGGCAGGCGACACGGTCACCGCAACCCAGTCCGCCGTGGTGCTGGAAAACCTGATCGGACAATTTCTTTACGGCAAAGCC GCTGGAACGGGCGACAAAAA
Downstream 100 bases:
>100_bases AGGCCAAAACCATGAGACCCGTGACCATGATGAACCGACGTTTCCCGGGGCCTGTGGCTCTTGGCCTGACCCTTTCCTGG GTCTTTTCCTGGGCCCTTTT
Product: VacJ family lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTHSNLAAHGGCTARQTALSDALRQTVPSGAPRWTALPGISRWVVLLGAAVLAGCATVAQPDPRDPLQGYNRSMAQFNEH LDTMVLKPVATAYREVTPAPVRTGVSNFFANIGDIWSFVNNLLQLRGEAAAASFMRVNVNTFLGLGGLLDIASELNIERH KQDFGLTLGHWGVGTGPYLVLPLLGPSTLRDSLALSVDIRGNALHHLESASARQSLYLLRTVEMRANLLRAGAVLDSAAL DKYSFTRDVFLQVRGQAAEANGMDDEDADNPSSEGMLPEEP
Sequences:
>Translated_281_residues MTHSNLAAHGGCTARQTALSDALRQTVPSGAPRWTALPGISRWVVLLGAAVLAGCATVAQPDPRDPLQGYNRSMAQFNEH LDTMVLKPVATAYREVTPAPVRTGVSNFFANIGDIWSFVNNLLQLRGEAAAASFMRVNVNTFLGLGGLLDIASELNIERH KQDFGLTLGHWGVGTGPYLVLPLLGPSTLRDSLALSVDIRGNALHHLESASARQSLYLLRTVEMRANLLRAGAVLDSAAL DKYSFTRDVFLQVRGQAAEANGMDDEDADNPSSEGMLPEEP >Mature_280_residues THSNLAAHGGCTARQTALSDALRQTVPSGAPRWTALPGISRWVVLLGAAVLAGCATVAQPDPRDPLQGYNRSMAQFNEHL DTMVLKPVATAYREVTPAPVRTGVSNFFANIGDIWSFVNNLLQLRGEAAAASFMRVNVNTFLGLGGLLDIASELNIERHK QDFGLTLGHWGVGTGPYLVLPLLGPSTLRDSLALSVDIRGNALHHLESASARQSLYLLRTVEMRANLLRAGAVLDSAALD KYSFTRDVFLQVRGQAAEANGMDDEDADNPSSEGMLPEEP
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane [H]
COG id: COG2853
COG function: function code M; Surface lipoprotein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaA family [H]
Homologues:
Organism=Escherichia coli, GI1788688, Length=236, Percent_Identity=35.5932203389831, Blast_Score=129, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007428 [H]
Pfam domain/function: PF04333 VacJ [H]
EC number: NA
Molecular weight: Translated: 30158; Mature: 30026
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHSNLAAHGGCTARQTALSDALRQTVPSGAPRWTALPGISRWVVLLGAAVLAGCATVAQ CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC PDPRDPLQGYNRSMAQFNEHLDTMVLKPVATAYREVTPAPVRTGVSNFFANIGDIWSFVN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH NLLQLRGEAAAASFMRVNVNTFLGLGGLLDIASELNIERHKQDFGLTLGHWGVGTGPYLV HHHHHCCHHHHHHHHEEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCCCCCCCEEE LPLLGPSTLRDSLALSVDIRGNALHHLESASARQSLYLLRTVEMRANLLRAGAVLDSAAL EECCCCHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKYSFTRDVFLQVRGQAAEANGMDDEDADNPSSEGMLPEEP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure THSNLAAHGGCTARQTALSDALRQTVPSGAPRWTALPGISRWVVLLGAAVLAGCATVAQ CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC PDPRDPLQGYNRSMAQFNEHLDTMVLKPVATAYREVTPAPVRTGVSNFFANIGDIWSFVN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH NLLQLRGEAAAASFMRVNVNTFLGLGGLLDIASELNIERHKQDFGLTLGHWGVGTGPYLV HHHHHCCHHHHHHHHEEEHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEECCCCCCCCEEE LPLLGPSTLRDSLALSVDIRGNALHHLESASARQSLYLLRTVEMRANLLRAGAVLDSAAL EECCCCHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKYSFTRDVFLQVRGQAAEANGMDDEDADNPSSEGMLPEEP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]