| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is proA [H]
Identifier: 121609347
GI number: 121609347
Start: 2703693
End: 2704358
Strand: Direct
Name: proA [H]
Synonym: Veis_2390
Alternate gene names: 121609347
Gene position: 2703693-2704358 (Clockwise)
Preceding gene: 121609346
Following gene: 121609350
Centisome position: 48.57
GC content: 67.27
Gene sequence:
>666_bases ATGGGTATGAGCACCACCACCGATTCGTTGCTGCCCCGGCTACAGTCCTGCTACACCGGCATCCTGCATGACGTGATGCG TGCTGCGGGCCTGCGCGACTTCACGCTGCCGCCGACGCTGCGCCCGCTGATCGCCGGGCGCAAACTCTGCGGCCCGGCCT TCACGGTCAACGGCCGCGTCGATCCCGGCGCCGATCCCCATGAGACGCTGATGGCCTGGACCGGTTTTCTCTCGCGTGCC GAGCCGGGCCACATCGCCGTGATACAGCCCAACGACTCGGTGGTCGCGCACATGGGCGAGCTTTCGGCCGAAACGCTCGG CGGCAAGGGCGTGTTGGGCGTGATTGCCGACGGTGGCCTGCGCGATGCCGAGTTCATCATCGCGCAGGGCTTTCAGGTCT GGCACCGCTACTTCACGCCGCGTGACGTGGTGGGCTACTGGTTGCCGGACGCGCTGCAAGTGCCGGTGCGCATCGGCGCG GTCACGGTCAACCCGGGCGACCTGCTGCTGGCCGACACCGATGGCGTGATCTGCATTCCACTGGCGCAGGCCGAGGCGGT GATCAGCCAGGCCGAGACCATGATGGCGCGCGAAAACCTCGTGCGCAGCGCCATCCTCACCGGCACCGACCCGCAACAGG CCTACCTGAAGTACCGCAAGTTCTGA
Upstream 100 bases:
>100_bases GTTGCTCGACCACCTGGCGCAGCCGGGTTAGTGCGCCGGGTTTTTCCAAAATCGGTTTCCTCCGGGCAAACCAGAAACTT CCAGAGACCGCAACAGAGAC
Downstream 100 bases:
>100_bases AGACCGCCAACAACGGTGCGCCCCGTGCAATCCCTGATCCCACCGGCTGGCGAATGACGATGTGGTTTGCATGAATTTCG TTCATTCGCTCATTCGTTCG
Product: putative methyltransferase
Products: NA
Alternate protein names: 4-hydroxy-2-oxoglutarate aldolase [H]
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MGMSTTTDSLLPRLQSCYTGILHDVMRAAGLRDFTLPPTLRPLIAGRKLCGPAFTVNGRVDPGADPHETLMAWTGFLSRA EPGHIAVIQPNDSVVAHMGELSAETLGGKGVLGVIADGGLRDAEFIIAQGFQVWHRYFTPRDVVGYWLPDALQVPVRIGA VTVNPGDLLLADTDGVICIPLAQAEAVISQAETMMARENLVRSAILTGTDPQQAYLKYRKF
Sequences:
>Translated_221_residues MGMSTTTDSLLPRLQSCYTGILHDVMRAAGLRDFTLPPTLRPLIAGRKLCGPAFTVNGRVDPGADPHETLMAWTGFLSRA EPGHIAVIQPNDSVVAHMGELSAETLGGKGVLGVIADGGLRDAEFIIAQGFQVWHRYFTPRDVVGYWLPDALQVPVRIGA VTVNPGDLLLADTDGVICIPLAQAEAVISQAETMMARENLVRSAILTGTDPQQAYLKYRKF >Mature_220_residues GMSTTTDSLLPRLQSCYTGILHDVMRAAGLRDFTLPPTLRPLIAGRKLCGPAFTVNGRVDPGADPHETLMAWTGFLSRAE PGHIAVIQPNDSVVAHMGELSAETLGGKGVLGVIADGGLRDAEFIIAQGFQVWHRYFTPRDVVGYWLPDALQVPVRIGAV TVNPGDLLLADTDGVICIPLAQAEAVISQAETMMARENLVRSAILTGTDPQQAYLKYRKF
Specific function: Plays a role in protocatechuate degradation. Has a broad substrate specificity and catalyzes the aldol cleavage of 4- hydroxy-4-methyl-2-oxoglutarate, 4-hydroxy-2-oxoglutarate and 4- carboxy-4-hydroxy-2-oxoadipate, and the decarboxylation of oxaloacetate.
COG id: COG0684
COG function: function code H; Demethylmenaquinone methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014165 - InterPro: IPR005493 [H]
Pfam domain/function: PF03737 Methyltransf_6 [H]
EC number: =4.1.1.3; =4.1.3.16; =4.1.3.17 [H]
Molecular weight: Translated: 23809; Mature: 23678
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMSTTTDSLLPRLQSCYTGILHDVMRAAGLRDFTLPPTLRPLIAGRKLCGPAFTVNGRV CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHCCCEEEECCCC DPGADPHETLMAWTGFLSRAEPGHIAVIQPNDSVVAHMGELSAETLGGKGVLGVIADGGL CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCC RDAEFIIAQGFQVWHRYFTPRDVVGYWLPDALQVPVRIGAVTVNPGDLLLADTDGVICIP CCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHCCCEEEEEEEECCCCEEEECCCCEEEEE LAQAEAVISQAETMMARENLVRSAILTGTDPQQAYLKYRKF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure GMSTTTDSLLPRLQSCYTGILHDVMRAAGLRDFTLPPTLRPLIAGRKLCGPAFTVNGRV CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHCCCEEEECCCC DPGADPHETLMAWTGFLSRAEPGHIAVIQPNDSVVAHMGELSAETLGGKGVLGVIADGGL CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCC RDAEFIIAQGFQVWHRYFTPRDVVGYWLPDALQVPVRIGAVTVNPGDLLLADTDGVICIP CCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHCCCEEEEEEEECCCCEEEECCCCEEEEE LAQAEAVISQAETMMARENLVRSAILTGTDPQQAYLKYRKF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11826967 [H]