| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is maeB [H]
Identifier: 120613386
GI number: 120613386
Start: 5306928
End: 5309240
Strand: Direct
Name: maeB [H]
Synonym: Aave_4759
Alternate gene names: 120613386
Gene position: 5306928-5309240 (Clockwise)
Preceding gene: 120613383
Following gene: 120613387
Centisome position: 99.14
GC content: 67.62
Gene sequence:
>2313_bases ATGTCCGATACCCCCCCGGTCAACACCACGCCTGACAAACGCGCCCTGCTGCGCCAAGCGGCCCTCGAATACCACGAGTT TCCGAAACCGGGAAAGATCGCCATCGCCGCCACCAAGCAGATGGTCAACCAGCACGATCTGGCGCTGGCCTACTCGCCGG GCGTGGCAGCGCCCTGCGAGGAGATCGTCAAGGACCCCGCCGCCGCCTTCCGCTACACGTCGCGCGGCAACCTCGTGGGC GTGATCTCCAACGGCACGGCGGTGCTGGGCCTGGGCGACATCGGCGCACTGGCCTCCAAGCCCGTCATGGAAGGCAAGGC CGTCCTGTTCAAGAAGTTCGCCGGCGTCGATGTCTTCGACATCGAGATCAACGAGAAGGACCCGGCCAAGCTCGTCGAGG TCATCGCCGCCCTGGAACCCACCTTCGGCGCCATCAACCTCGAGGACATCAAGGCCCCCGACTGCTTCTACGTCGAGCGC GAACTGCGCAAGCGCCTGAACATCCCCGTCTTCCATGACGACCAGCACGGCACGGCCATCACCGTGGCGGCGGCCATGCT CAACGCCCTGAAGGTGGTGGGCAAGGACATCGGCGAGGTGCGCCTGGTCACCTCCGGCGCGGGCGCCGCCGCGCTCGCCT GCCTGAACCTGCTGCTGAAGGTGGGTCTCAAGCGCGAGAACGTGTTCGTCACCGACCTGGCCGGCGTGGTCTATGAAGGC CGCACCGAGCTGATGGACGAGGACAAGATCCAGTTCGCCCAGAAGACCGACGCCCGCACCCTGGCCGAAGTCATCGAAGG CGCCGACGTGTTCCTGGGCCTGTCGGCCGGCGGCGTGCTCAAGCCCGCCATGGTGGCGAAGATGGCGGCGCGCCCGGTCA TCTTCGCGCTGGCCAACCCCAACCCGGAAATCACGCCCGAGGACGCCCACGCCGTGCGCGGCGACGTGGTGATGGCCACC GGCCGCACCGACTACCCGAACCAGGTCAACAACGTCCTGTGCTTCCCCTACATTTTCCGCGGTGCGCTCGACTGCGGCGC CACGACCATCACGCTGGAGATGGAGATCGCCGCGGTGCATGCCATCGCCGAGCTGGCCCAGGCCGAGCAGAGCGAGGTGG TGGCCGCGGCCTACGTGGGCGAGCCCCTGGCCTTCGGTCCCGAATACCTGATCCCGAAGCCGTTCGATCCGCGGCTGATG ATCAAGATCGCGCCGGCCGTGGCCCAGGCCGCCGCCGACAGCGGCGTGGCCCAGCGCCCCATCGCCGACATGGACGCCTA CCGCGACCACCTGCAGACCTTCGTCTATGCCTCCGGCACGATGATGAAGCCCATCGTCAATGCCGCCAAGCTGGCCGCCA GGAAGCGGGTGGCCTACGCCGAGGGCGAGGAAGAGCGCGTGCTGCGCGCCGCCCAGATCGTGGTGGACGAGAAGATCGCC CGCCCCACCCTGATCGGCCGCCCGGCCATCATCGCCCAGCGCGTCGAGAAGTTCGGCCTGCGCCTGAAGGAAGGCGTGGA CTACGACGTGGTCAACGTCGAGAACGACCACCGCTACCGCGACTTCTGGCAGACCTACCACCGCATGACCGAGCGCAAGG GCATCACCGTGCCCATCGCCAAGATCGAGATGCGCCGCCGCCTGGCGCTGATCGCCTCCATGCTGCTGCACAAGGGCGAG GTGGACGGCATGATCTGCGGCACCTGGGGGCACACCGCGCACCACCTGAACTACATCGACCAGGTGATCGGCAAGCGCGC CGGCGTGAACACCTACGCCTGCATGAACGGCCTGTTGCTGCCCGACCGCCAGGTGTTCCTGGTGGACACGCACGTCAACT ACGACCCCACGGCCGAACAGCTGGCGGAGATCACCGTGATGGCGGCCGAGGAAATGATGCGCTTCGGCATCAAGCCCAAG GCGGCATTGCTGTCGCACTCCAACTTCGGCTCCAGCACCCAGCCCAGCGCGGTGAAGATGCGGCAGACGCTGGAACTGCT GCGGGTGCAGGCTCCCTGGCTCGAAGTGGACGGCGAGATGCACGGCGACGTGGCGCTGGACGCCGCGCTGCGCACCCAGG TCATGCCGCACAGCACGCTGGCCGGAAGCGCCAACCTGCTGGTGCTGCCCAACATCGATGCGGCCAACATCTCCTACAAC CTGCTCAAGACGGCGGCCGGCGGCGGCATCGCCATCGGCCCCGTGCTGCTCGGCGCGTCCGAGCCGGTGCACATCCTCAC GGCCAGCGCGACCGTACGGCGCATCGTCAATATGACAGCGCTCACGGTGGCGGACGCCAACGCCGCTCGCTGA
Upstream 100 bases:
>100_bases CAGGCTGACTACAATCTCACACCCTAAAACGCCGGCCCGCCCTGGAGCGCCCGCTTCCTGGCGAGGTCCGGCAGCCCTTC ACAGAGCTGGAGACCCCTTG
Downstream 100 bases:
>100_bases CCGGCTCGGCCATAGCGAGCGCTAACTTTAAGAGGCTCCGAACCCCTCCGGCGCCTGCTCAATTATTGAGCAGGCGCTTG CTTTTTGGGGGTCTTTACGT
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 770; Mature: 769
Protein sequence:
>770_residues MSDTPPVNTTPDKRALLRQAALEYHEFPKPGKIAIAATKQMVNQHDLALAYSPGVAAPCEEIVKDPAAAFRYTSRGNLVG VISNGTAVLGLGDIGALASKPVMEGKAVLFKKFAGVDVFDIEINEKDPAKLVEVIAALEPTFGAINLEDIKAPDCFYVER ELRKRLNIPVFHDDQHGTAITVAAAMLNALKVVGKDIGEVRLVTSGAGAAALACLNLLLKVGLKRENVFVTDLAGVVYEG RTELMDEDKIQFAQKTDARTLAEVIEGADVFLGLSAGGVLKPAMVAKMAARPVIFALANPNPEITPEDAHAVRGDVVMAT GRTDYPNQVNNVLCFPYIFRGALDCGATTITLEMEIAAVHAIAELAQAEQSEVVAAAYVGEPLAFGPEYLIPKPFDPRLM IKIAPAVAQAAADSGVAQRPIADMDAYRDHLQTFVYASGTMMKPIVNAAKLAARKRVAYAEGEEERVLRAAQIVVDEKIA RPTLIGRPAIIAQRVEKFGLRLKEGVDYDVVNVENDHRYRDFWQTYHRMTERKGITVPIAKIEMRRRLALIASMLLHKGE VDGMICGTWGHTAHHLNYIDQVIGKRAGVNTYACMNGLLLPDRQVFLVDTHVNYDPTAEQLAEITVMAAEEMMRFGIKPK AALLSHSNFGSSTQPSAVKMRQTLELLRVQAPWLEVDGEMHGDVALDAALRTQVMPHSTLAGSANLLVLPNIDAANISYN LLKTAAGGGIAIGPVLLGASEPVHILTASATVRRIVNMTALTVADANAAR
Sequences:
>Translated_770_residues MSDTPPVNTTPDKRALLRQAALEYHEFPKPGKIAIAATKQMVNQHDLALAYSPGVAAPCEEIVKDPAAAFRYTSRGNLVG VISNGTAVLGLGDIGALASKPVMEGKAVLFKKFAGVDVFDIEINEKDPAKLVEVIAALEPTFGAINLEDIKAPDCFYVER ELRKRLNIPVFHDDQHGTAITVAAAMLNALKVVGKDIGEVRLVTSGAGAAALACLNLLLKVGLKRENVFVTDLAGVVYEG RTELMDEDKIQFAQKTDARTLAEVIEGADVFLGLSAGGVLKPAMVAKMAARPVIFALANPNPEITPEDAHAVRGDVVMAT GRTDYPNQVNNVLCFPYIFRGALDCGATTITLEMEIAAVHAIAELAQAEQSEVVAAAYVGEPLAFGPEYLIPKPFDPRLM IKIAPAVAQAAADSGVAQRPIADMDAYRDHLQTFVYASGTMMKPIVNAAKLAARKRVAYAEGEEERVLRAAQIVVDEKIA RPTLIGRPAIIAQRVEKFGLRLKEGVDYDVVNVENDHRYRDFWQTYHRMTERKGITVPIAKIEMRRRLALIASMLLHKGE VDGMICGTWGHTAHHLNYIDQVIGKRAGVNTYACMNGLLLPDRQVFLVDTHVNYDPTAEQLAEITVMAAEEMMRFGIKPK AALLSHSNFGSSTQPSAVKMRQTLELLRVQAPWLEVDGEMHGDVALDAALRTQVMPHSTLAGSANLLVLPNIDAANISYN LLKTAAGGGIAIGPVLLGASEPVHILTASATVRRIVNMTALTVADANAAR >Mature_769_residues SDTPPVNTTPDKRALLRQAALEYHEFPKPGKIAIAATKQMVNQHDLALAYSPGVAAPCEEIVKDPAAAFRYTSRGNLVGV ISNGTAVLGLGDIGALASKPVMEGKAVLFKKFAGVDVFDIEINEKDPAKLVEVIAALEPTFGAINLEDIKAPDCFYVERE LRKRLNIPVFHDDQHGTAITVAAAMLNALKVVGKDIGEVRLVTSGAGAAALACLNLLLKVGLKRENVFVTDLAGVVYEGR TELMDEDKIQFAQKTDARTLAEVIEGADVFLGLSAGGVLKPAMVAKMAARPVIFALANPNPEITPEDAHAVRGDVVMATG RTDYPNQVNNVLCFPYIFRGALDCGATTITLEMEIAAVHAIAELAQAEQSEVVAAAYVGEPLAFGPEYLIPKPFDPRLMI KIAPAVAQAAADSGVAQRPIADMDAYRDHLQTFVYASGTMMKPIVNAAKLAARKRVAYAEGEEERVLRAAQIVVDEKIAR PTLIGRPAIIAQRVEKFGLRLKEGVDYDVVNVENDHRYRDFWQTYHRMTERKGITVPIAKIEMRRRLALIASMLLHKGEV DGMICGTWGHTAHHLNYIDQVIGKRAGVNTYACMNGLLLPDRQVFLVDTHVNYDPTAEQLAEITVMAAEEMMRFGIKPKA ALLSHSNFGSSTQPSAVKMRQTLELLRVQAPWLEVDGEMHGDVALDAALRTQVMPHSTLAGSANLLVLPNIDAANISYNL LKTAAGGGIAIGPVLLGASEPVHILTASATVRRIVNMTALTVADANAAR
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=395, Percent_Identity=26.0759493670886, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI62420882, Length=345, Percent_Identity=27.8260869565217, Blast_Score=87, Evalue=7e-17, Organism=Homo sapiens, GI62420880, Length=345, Percent_Identity=27.8260869565217, Blast_Score=87, Evalue=7e-17, Organism=Homo sapiens, GI239049447, Length=345, Percent_Identity=27.8260869565217, Blast_Score=87, Evalue=7e-17, Organism=Homo sapiens, GI4505145, Length=408, Percent_Identity=26.2254901960784, Blast_Score=86, Evalue=2e-16, Organism=Homo sapiens, GI270265879, Length=370, Percent_Identity=26.7567567567568, Blast_Score=82, Evalue=2e-15, Organism=Escherichia coli, GI1788806, Length=752, Percent_Identity=60.5053191489362, Blast_Score=935, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=310, Percent_Identity=31.2903225806452, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI1788800, Length=313, Percent_Identity=31.3099041533546, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI87081919, Length=494, Percent_Identity=24.4939271255061, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17537199, Length=352, Percent_Identity=26.1363636363636, Blast_Score=75, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322823, Length=347, Percent_Identity=26.5129682997118, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI281362672, Length=404, Percent_Identity=26.7326732673267, Blast_Score=97, Evalue=4e-20, Organism=Drosophila melanogaster, GI281362674, Length=404, Percent_Identity=26.7326732673267, Blast_Score=97, Evalue=4e-20, Organism=Drosophila melanogaster, GI21356279, Length=404, Percent_Identity=26.7326732673267, Blast_Score=97, Evalue=5e-20, Organism=Drosophila melanogaster, GI24646388, Length=349, Percent_Identity=29.512893982808, Blast_Score=90, Evalue=6e-18, Organism=Drosophila melanogaster, GI24646386, Length=349, Percent_Identity=29.512893982808, Blast_Score=90, Evalue=7e-18, Organism=Drosophila melanogaster, GI78707242, Length=350, Percent_Identity=25.7142857142857, Blast_Score=81, Evalue=3e-15, Organism=Drosophila melanogaster, GI78707238, Length=350, Percent_Identity=25.7142857142857, Blast_Score=81, Evalue=3e-15, Organism=Drosophila melanogaster, GI78707240, Length=350, Percent_Identity=25.7142857142857, Blast_Score=80, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 83024; Mature: 82893
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTPPVNTTPDKRALLRQAALEYHEFPKPGKIAIAATKQMVNQHDLALAYSPGVAAPCE CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCEEEEECCCCCCCHH EIVKDPAAAFRYTSRGNLVGVISNGTAVLGLGDIGALASKPVMEGKAVLFKKFAGVDVFD HHHCCCHHHEEECCCCCEEEEEECCEEEEEECCHHHHHCCCCCCCHHHHHHHHCCCEEEE IEINEKDPAKLVEVIAALEPTFGAINLEDIKAPDCFYVERELRKRLNIPVFHDDQHGTAI EEECCCCHHHHHHHHHHHCCCCCCEEHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCHH TVAAAMLNALKVVGKDIGEVRLVTSGAGAAALACLNLLLKVGLKRENVFVTDLAGVVYEG HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCC RTELMDEDKIQFAQKTDARTLAEVIEGADVFLGLSAGGVLKPAMVAKMAARPVIFALANP CHHHCCCHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEECC NPEITPEDAHAVRGDVVMATGRTDYPNQVNNVLCFPYIFRGALDCGATTITLEMEIAAVH CCCCCCCHHHHCCCCEEEEECCCCCCHHHCCEEEHHHHHHHHHHCCCEEEEEEEHHHHHH AIAELAQAEQSEVVAAAYVGEPLAFGPEYLIPKPFDPRLMIKIAPAVAQAAADSGVAQRP HHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCC IADMDAYRDHLQTFVYASGTMMKPIVNAAKLAARKRVAYAEGEEERVLRAAQIVVDEKIA CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC RPTLIGRPAIIAQRVEKFGLRLKEGVDYDVVNVENDHRYRDFWQTYHRMTERKGITVPIA CCCCCCCHHHHHHHHHHHCCCHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEHH KIEMRRRLALIASMLLHKGEVDGMICGTWGHTAHHLNYIDQVIGKRAGVNTYACMNGLLL HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCC PDRQVFLVDTHVNYDPTAEQLAEITVMAAEEMMRFGIKPKAALLSHSNFGSSTQPSAVKM CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHH RQTLELLRVQAPWLEVDGEMHGDVALDAALRTQVMPHSTLAGSANLLVLPNIDAANISYN HHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCHH LLKTAAGGGIAIGPVLLGASEPVHILTASATVRRIVNMTALTVADANAAR HHHHCCCCCEEEEHEEECCCCCEEEEECHHHHHHHHHHHHEEEECCCCCC >Mature Secondary Structure SDTPPVNTTPDKRALLRQAALEYHEFPKPGKIAIAATKQMVNQHDLALAYSPGVAAPCE CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCEEEEECCCCCCCHH EIVKDPAAAFRYTSRGNLVGVISNGTAVLGLGDIGALASKPVMEGKAVLFKKFAGVDVFD HHHCCCHHHEEECCCCCEEEEEECCEEEEEECCHHHHHCCCCCCCHHHHHHHHCCCEEEE IEINEKDPAKLVEVIAALEPTFGAINLEDIKAPDCFYVERELRKRLNIPVFHDDQHGTAI EEECCCCHHHHHHHHHHHCCCCCCEEHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCHH TVAAAMLNALKVVGKDIGEVRLVTSGAGAAALACLNLLLKVGLKRENVFVTDLAGVVYEG HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCC RTELMDEDKIQFAQKTDARTLAEVIEGADVFLGLSAGGVLKPAMVAKMAARPVIFALANP CHHHCCCHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCEEEEEECC NPEITPEDAHAVRGDVVMATGRTDYPNQVNNVLCFPYIFRGALDCGATTITLEMEIAAVH CCCCCCCHHHHCCCCEEEEECCCCCCHHHCCEEEHHHHHHHHHHCCCEEEEEEEHHHHHH AIAELAQAEQSEVVAAAYVGEPLAFGPEYLIPKPFDPRLMIKIAPAVAQAAADSGVAQRP HHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCC IADMDAYRDHLQTFVYASGTMMKPIVNAAKLAARKRVAYAEGEEERVLRAAQIVVDEKIA CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC RPTLIGRPAIIAQRVEKFGLRLKEGVDYDVVNVENDHRYRDFWQTYHRMTERKGITVPIA CCCCCCCHHHHHHHHHHHCCCHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEHH KIEMRRRLALIASMLLHKGEVDGMICGTWGHTAHHLNYIDQVIGKRAGVNTYACMNGLLL HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCC PDRQVFLVDTHVNYDPTAEQLAEITVMAAEEMMRFGIKPKAALLSHSNFGSSTQPSAVKM CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHH RQTLELLRVQAPWLEVDGEMHGDVALDAALRTQVMPHSTLAGSANLLVLPNIDAANISYN HHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCHH LLKTAAGGGIAIGPVLLGASEPVHILTASATVRRIVNMTALTVADANAAR HHHHCCCCCEEEEHEEECCCCCEEEEECHHHHHHHHHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]