Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120613335

Identifier: 120613335

GI number: 120613335

Start: 5248183

End: 5250126

Strand: Direct

Name: 120613335

Synonym: Aave_4704

Alternate gene names: NA

Gene position: 5248183-5250126 (Clockwise)

Preceding gene: 120613334

Following gene: 120613336

Centisome position: 98.05

GC content: 71.55

Gene sequence:

>1944_bases
ATGCATGCTGACAACCGGGAACCCTCCGTTGCCGTTAGGCACCGGTTCCCGCACCGGCGGTCCACGCCGTCTCCGCCCCA
CGGAAGCTCACCCATGCACTCCAATCCCACGGCCCCCGCCGGGCTGCCGCCCGCCGACCCGACGCAGCCTCGCTCCCCCA
CCGGACCGGCGGCCCCGGCCTCGCCCGCCATGGCCGCCTTCGCCGCCGCCGGCCTGCTGACCGCATGCGGCGGGAGCAGC
GGGGGCGAGCCGGCGTCCCCCGCCGGTGCCAGCGGCACCGCTGCAGGCACGGGGGGCGGAACGGCGGCCACGGCGCCCGC
CACGGAAACGGATGCCGTGCGCTTCCTGCTCCAGGCCCAGTTCTCCGCCACCGACGAGGACATCGCCGCCGTGCGCGCCA
AAGGCTACGCCGCCTGGCTGGCCGAACAGTTCGCGCAGCCCATCGGCACGACGGGCACCGACTGGCTGGCGCAGCGCGGC
TATGGCGTGGCGAACGCGGACACGCGCTACCACAACACGTCCTACCCCGCCGATTACATGCTGTGGAGCCAGCTCTTCAC
CGAGCGCGATGCCGTGCGCAAGCGCGTGGCGCTGGCGCTCTCGGAGATCATGGTCGTCTCCACCAATGGACTGAACCAGC
CGTGGCCCGCGTTCCTCGCCGCCGGCTACTGGGACGTGCTCAACCAGCATGCGCTCGGCAATTTCCGCGCGCTGCTGGAG
GCCGTGACGCTCAACCCCGCCATGGGCGTGTACCTCAACGCCCTGGGCAGCCAGAAGGAGGATGCGCGCACCGGCCGCCA
GCCCGACGAGAACTATGCCCGCGAGGTGATGCAGCTCTTCACACTGGGCCTGTACCGGCTGAACGCCGACGGCACCGAGC
AGCGCGACGCGAGCGGCAACCGCATCGAGACCTACGGCCCCTCCGACGTGAGCAACCTCGCGCGGGTGTTCACCGGCTAC
GACTACGACCGCAGCCAGAACCAGTCGTTCACCGTGGGCACCAGCACCGTGCCGGGGCCCCAGCAGGCGGGGCGGCCGAT
GGTGCTGGTCGCCAGCCGGCACTCGGCGCTGGCCGCGACGTTCCTGGGTACGACCATCGGAGCGGGCACCCCGGGCGATG
CGGCCCTGAAGACCGCGCTGGATACGCTTTTCAACCACCCCAACGTCGCCCCGTTCATCGGCCGGCAGCTCATCCAGCGG
CTGGTGACGAGCAACCCCAGCCCCGCCTACGTGGCGCGGGTGGCGGCCGCCTTCTCGGACAACGGCAGCGGGGTGCGCGG
CGACCTGCGCGCCGTGGTGGCAGCGATCCTGCTCGACAGCGAGGCCCGGGATGCCGCAGGCCTGTCCAGCCCCTCCTTCG
GCCGACTGCGCGAGCCCATGGTGCGCTTCGTCCAGTGGGGCCGCACCTTCGGCCTGCGGTCGGCCCGCGGCAGCTGGAAG
CTCGGCGACCTGAGCGACCCGGCCTCCCGGCTGGGGCAGAGCCCGCTGCGCTCGCCTTCGGTGTTCAATTTCTTCCGCCC
CGGCTACGTGCCGCCCTCCACGGCCATCGCGTCCGCCGGGCAGGTGGCGCCGGAGTTCCAGATCGTCACCGAGTCCAGCG
TGGGCGGCTACCTGAACTTCATGCAGAACGCGATCCGCAACGGCCTGTTCGTGAACGCTCCCGACCTGCCGCAGAACAAC
GCGAGCAACGGCAACAACGGCTTCGACATCACCTGCGACTATGCCGCCCTGCTCCCGCTGGTGACCGATCCGGCCGCACT
GGTGCGCAAGGCGGCGCTGCTGCTGTCGGGGGGCCAGATCTCCGATGCCACGCAGGCGCGCATCGCCAATGCGCTGGCAG
CCACGCCGGTCACGGCCTCGAGCAGCGCGGCGGCCAAGCTCAACCGCGTGGCCGCAGCCGTCTTCCTGGTCATGGCCTGC
CCGGCCTATCTCGTGCAGAAGTGA

Upstream 100 bases:

>100_bases
ACCAGCCTCCCGCCCTCCCTGCGCTGGTGGGCGTTTTGACTCGGCCGTACAACGGCCGGCCGCAGGATGACATTTCGTCA
CCATTTCCCTGCAATTCAGG

Downstream 100 bases:

>100_bases
ACGGCCCGCGCCGTCCCCCCACCGGAGCCCATTCCATGCCGTTCATCGATCCCGCACGACACACGCGCCGCGCCTTCCTG
CGCCGCTCGGCCCAGCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 647; Mature: 647

Protein sequence:

>647_residues
MHADNREPSVAVRHRFPHRRSTPSPPHGSSPMHSNPTAPAGLPPADPTQPRSPTGPAAPASPAMAAFAAAGLLTACGGSS
GGEPASPAGASGTAAGTGGGTAATAPATETDAVRFLLQAQFSATDEDIAAVRAKGYAAWLAEQFAQPIGTTGTDWLAQRG
YGVANADTRYHNTSYPADYMLWSQLFTERDAVRKRVALALSEIMVVSTNGLNQPWPAFLAAGYWDVLNQHALGNFRALLE
AVTLNPAMGVYLNALGSQKEDARTGRQPDENYAREVMQLFTLGLYRLNADGTEQRDASGNRIETYGPSDVSNLARVFTGY
DYDRSQNQSFTVGTSTVPGPQQAGRPMVLVASRHSALAATFLGTTIGAGTPGDAALKTALDTLFNHPNVAPFIGRQLIQR
LVTSNPSPAYVARVAAAFSDNGSGVRGDLRAVVAAILLDSEARDAAGLSSPSFGRLREPMVRFVQWGRTFGLRSARGSWK
LGDLSDPASRLGQSPLRSPSVFNFFRPGYVPPSTAIASAGQVAPEFQIVTESSVGGYLNFMQNAIRNGLFVNAPDLPQNN
ASNGNNGFDITCDYAALLPLVTDPAALVRKAALLLSGGQISDATQARIANALAATPVTASSSAAAKLNRVAAAVFLVMAC
PAYLVQK

Sequences:

>Translated_647_residues
MHADNREPSVAVRHRFPHRRSTPSPPHGSSPMHSNPTAPAGLPPADPTQPRSPTGPAAPASPAMAAFAAAGLLTACGGSS
GGEPASPAGASGTAAGTGGGTAATAPATETDAVRFLLQAQFSATDEDIAAVRAKGYAAWLAEQFAQPIGTTGTDWLAQRG
YGVANADTRYHNTSYPADYMLWSQLFTERDAVRKRVALALSEIMVVSTNGLNQPWPAFLAAGYWDVLNQHALGNFRALLE
AVTLNPAMGVYLNALGSQKEDARTGRQPDENYAREVMQLFTLGLYRLNADGTEQRDASGNRIETYGPSDVSNLARVFTGY
DYDRSQNQSFTVGTSTVPGPQQAGRPMVLVASRHSALAATFLGTTIGAGTPGDAALKTALDTLFNHPNVAPFIGRQLIQR
LVTSNPSPAYVARVAAAFSDNGSGVRGDLRAVVAAILLDSEARDAAGLSSPSFGRLREPMVRFVQWGRTFGLRSARGSWK
LGDLSDPASRLGQSPLRSPSVFNFFRPGYVPPSTAIASAGQVAPEFQIVTESSVGGYLNFMQNAIRNGLFVNAPDLPQNN
ASNGNNGFDITCDYAALLPLVTDPAALVRKAALLLSGGQISDATQARIANALAATPVTASSSAAAKLNRVAAAVFLVMAC
PAYLVQK
>Mature_647_residues
MHADNREPSVAVRHRFPHRRSTPSPPHGSSPMHSNPTAPAGLPPADPTQPRSPTGPAAPASPAMAAFAAAGLLTACGGSS
GGEPASPAGASGTAAGTGGGTAATAPATETDAVRFLLQAQFSATDEDIAAVRAKGYAAWLAEQFAQPIGTTGTDWLAQRG
YGVANADTRYHNTSYPADYMLWSQLFTERDAVRKRVALALSEIMVVSTNGLNQPWPAFLAAGYWDVLNQHALGNFRALLE
AVTLNPAMGVYLNALGSQKEDARTGRQPDENYAREVMQLFTLGLYRLNADGTEQRDASGNRIETYGPSDVSNLARVFTGY
DYDRSQNQSFTVGTSTVPGPQQAGRPMVLVASRHSALAATFLGTTIGAGTPGDAALKTALDTLFNHPNVAPFIGRQLIQR
LVTSNPSPAYVARVAAAFSDNGSGVRGDLRAVVAAILLDSEARDAAGLSSPSFGRLREPMVRFVQWGRTFGLRSARGSWK
LGDLSDPASRLGQSPLRSPSVFNFFRPGYVPPSTAIASAGQVAPEFQIVTESSVGGYLNFMQNAIRNGLFVNAPDLPQNN
ASNGNNGFDITCDYAALLPLVTDPAALVRKAALLLSGGQISDATQARIANALAATPVTASSSAAAKLNRVAAAVFLVMAC
PAYLVQK

Specific function: Unknown

COG id: COG5267

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67785; Mature: 67785

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHADNREPSVAVRHRFPHRRSTPSPPHGSSPMHSNPTAPAGLPPADPTQPRSPTGPAAPA
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPAMAAFAAAGLLTACGGSSGGEPASPAGASGTAAGTGGGTAATAPATETDAVRFLLQAQ
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
FSATDEDIAAVRAKGYAAWLAEQFAQPIGTTGTDWLAQRGYGVANADTRYHNTSYPADYM
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHH
LWSQLFTERDAVRKRVALALSEIMVVSTNGLNQPWPAFLAAGYWDVLNQHALGNFRALLE
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AVTLNPAMGVYLNALGSQKEDARTGRQPDENYAREVMQLFTLGLYRLNADGTEQRDASGN
HHHCCCHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC
RIETYGPSDVSNLARVFTGYDYDRSQNQSFTVGTSTVPGPQQAGRPMVLVASRHSALAAT
EEECCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHCCCCEEEEECCCHHHHHH
FLGTTIGAGTPGDAALKTALDTLFNHPNVAPFIGRQLIQRLVTSNPSPAYVARVAAAFSD
HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
NGSGVRGDLRAVVAAILLDSEARDAAGLSSPSFGRLREPMVRFVQWGRTFGLRSARGSWK
CCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LGDLSDPASRLGQSPLRSPSVFNFFRPGYVPPSTAIASAGQVAPEFQIVTESSVGGYLNF
CCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHH
MQNAIRNGLFVNAPDLPQNNASNGNNGFDITCDYAALLPLVTDPAALVRKAALLLSGGQI
HHHHHHCCEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHHCCCCC
SDATQARIANALAATPVTASSSAAAKLNRVAAAVFLVMACPAYLVQK
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHADNREPSVAVRHRFPHRRSTPSPPHGSSPMHSNPTAPAGLPPADPTQPRSPTGPAAPA
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SPAMAAFAAAGLLTACGGSSGGEPASPAGASGTAAGTGGGTAATAPATETDAVRFLLQAQ
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
FSATDEDIAAVRAKGYAAWLAEQFAQPIGTTGTDWLAQRGYGVANADTRYHNTSYPADYM
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHH
LWSQLFTERDAVRKRVALALSEIMVVSTNGLNQPWPAFLAAGYWDVLNQHALGNFRALLE
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AVTLNPAMGVYLNALGSQKEDARTGRQPDENYAREVMQLFTLGLYRLNADGTEQRDASGN
HHHCCCHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC
RIETYGPSDVSNLARVFTGYDYDRSQNQSFTVGTSTVPGPQQAGRPMVLVASRHSALAAT
EEECCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHCCCCEEEEECCCHHHHHH
FLGTTIGAGTPGDAALKTALDTLFNHPNVAPFIGRQLIQRLVTSNPSPAYVARVAAAFSD
HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
NGSGVRGDLRAVVAAILLDSEARDAAGLSSPSFGRLREPMVRFVQWGRTFGLRSARGSWK
CCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LGDLSDPASRLGQSPLRSPSVFNFFRPGYVPPSTAIASAGQVAPEFQIVTESSVGGYLNF
CCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHH
MQNAIRNGLFVNAPDLPQNNASNGNNGFDITCDYAALLPLVTDPAALVRKAALLLSGGQI
HHHHHHCCEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHHCCCCC
SDATQARIANALAATPVTASSSAAAKLNRVAAAVFLVMACPAYLVQK
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA