| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613323
Identifier: 120613323
GI number: 120613323
Start: 5235656
End: 5235991
Strand: Direct
Name: 120613323
Synonym: Aave_4692
Alternate gene names: NA
Gene position: 5235656-5235991 (Clockwise)
Preceding gene: 120613322
Following gene: 120613324
Centisome position: 97.81
GC content: 67.86
Gene sequence:
>336_bases ATGGAAGCGTCGGTGACGGAGATCGTGGTGGCGACCGTGGGGCTGGCGCTGATCACGCTGGTCACGCGCGCCTTCTTCAT GATTCCGGAGAAGGAAGTCCCGATGCCCGACTGGCTCAAGCGCGGGCTCAAGTATGCCCCGCTCGCGGCCCTGGCAGCCG TGCTCGCGCCGGAGCTCTTCATGGCGCGCGGGGAATTCATCGGCACCCTGCAGGACGCGCGGCTGCCGGCCATGGCCTGC GCCACGGCCTATTATTTCTGGCGCCGGGGCATCCTGGGCACCATCTGCGTGGGCATGGCGGTCTATCTGCCGCTGCACAT CGGCCTGGGCTGGTAG
Upstream 100 bases:
>100_bases CGGCCGGACGAGAAAAAGCACGTGCAGGACGGGGACGTGGTGCCGCTGCGCGAGGAGGACCACCCATGAACGGCGGCAGG CGGCGCGCGGGGGAGGCGGC
Downstream 100 bases:
>100_bases CCCGCGCGGGCCGCCCGCCTGTGGGCAGCCGCCTACGGAGCGCCCGCGACGGCGGCGCCTACAATCCCCCGCAGTTTTTC CCGCCACAGCCCGACCGCGC
Product: branched-chain amino acid transport
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MEASVTEIVVATVGLALITLVTRAFFMIPEKEVPMPDWLKRGLKYAPLAALAAVLAPELFMARGEFIGTLQDARLPAMAC ATAYYFWRRGILGTICVGMAVYLPLHIGLGW
Sequences:
>Translated_111_residues MEASVTEIVVATVGLALITLVTRAFFMIPEKEVPMPDWLKRGLKYAPLAALAAVLAPELFMARGEFIGTLQDARLPAMAC ATAYYFWRRGILGTICVGMAVYLPLHIGLGW >Mature_111_residues MEASVTEIVVATVGLALITLVTRAFFMIPEKEVPMPDWLKRGLKYAPLAALAAVLAPELFMARGEFIGTLQDARLPAMAC ATAYYFWRRGILGTICVGMAVYLPLHIGLGW
Specific function: Unknown
COG id: COG4392
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12129; Mature: 12129
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEASVTEIVVATVGLALITLVTRAFFMIPEKEVPMPDWLKRGLKYAPLAALAAVLAPELF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH MARGEFIGTLQDARLPAMACATAYYFWRRGILGTICVGMAVYLPLHIGLGW HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEASVTEIVVATVGLALITLVTRAFFMIPEKEVPMPDWLKRGLKYAPLAALAAVLAPELF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH MARGEFIGTLQDARLPAMACATAYYFWRRGILGTICVGMAVYLPLHIGLGW HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA