Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120613323

Identifier: 120613323

GI number: 120613323

Start: 5235656

End: 5235991

Strand: Direct

Name: 120613323

Synonym: Aave_4692

Alternate gene names: NA

Gene position: 5235656-5235991 (Clockwise)

Preceding gene: 120613322

Following gene: 120613324

Centisome position: 97.81

GC content: 67.86

Gene sequence:

>336_bases
ATGGAAGCGTCGGTGACGGAGATCGTGGTGGCGACCGTGGGGCTGGCGCTGATCACGCTGGTCACGCGCGCCTTCTTCAT
GATTCCGGAGAAGGAAGTCCCGATGCCCGACTGGCTCAAGCGCGGGCTCAAGTATGCCCCGCTCGCGGCCCTGGCAGCCG
TGCTCGCGCCGGAGCTCTTCATGGCGCGCGGGGAATTCATCGGCACCCTGCAGGACGCGCGGCTGCCGGCCATGGCCTGC
GCCACGGCCTATTATTTCTGGCGCCGGGGCATCCTGGGCACCATCTGCGTGGGCATGGCGGTCTATCTGCCGCTGCACAT
CGGCCTGGGCTGGTAG

Upstream 100 bases:

>100_bases
CGGCCGGACGAGAAAAAGCACGTGCAGGACGGGGACGTGGTGCCGCTGCGCGAGGAGGACCACCCATGAACGGCGGCAGG
CGGCGCGCGGGGGAGGCGGC

Downstream 100 bases:

>100_bases
CCCGCGCGGGCCGCCCGCCTGTGGGCAGCCGCCTACGGAGCGCCCGCGACGGCGGCGCCTACAATCCCCCGCAGTTTTTC
CCGCCACAGCCCGACCGCGC

Product: branched-chain amino acid transport

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MEASVTEIVVATVGLALITLVTRAFFMIPEKEVPMPDWLKRGLKYAPLAALAAVLAPELFMARGEFIGTLQDARLPAMAC
ATAYYFWRRGILGTICVGMAVYLPLHIGLGW

Sequences:

>Translated_111_residues
MEASVTEIVVATVGLALITLVTRAFFMIPEKEVPMPDWLKRGLKYAPLAALAAVLAPELFMARGEFIGTLQDARLPAMAC
ATAYYFWRRGILGTICVGMAVYLPLHIGLGW
>Mature_111_residues
MEASVTEIVVATVGLALITLVTRAFFMIPEKEVPMPDWLKRGLKYAPLAALAAVLAPELFMARGEFIGTLQDARLPAMAC
ATAYYFWRRGILGTICVGMAVYLPLHIGLGW

Specific function: Unknown

COG id: COG4392

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12129; Mature: 12129

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEASVTEIVVATVGLALITLVTRAFFMIPEKEVPMPDWLKRGLKYAPLAALAAVLAPELF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH
MARGEFIGTLQDARLPAMACATAYYFWRRGILGTICVGMAVYLPLHIGLGW
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEASVTEIVVATVGLALITLVTRAFFMIPEKEVPMPDWLKRGLKYAPLAALAAVLAPELF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH
MARGEFIGTLQDARLPAMACATAYYFWRRGILGTICVGMAVYLPLHIGLGW
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA