Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is ybdZ [C]

Identifier: 120613291

GI number: 120613291

Start: 5199691

End: 5199864

Strand: Direct

Name: ybdZ [C]

Synonym: Aave_4660

Alternate gene names: 120613291

Gene position: 5199691-5199864 (Clockwise)

Preceding gene: 120613290

Following gene: 120613292

Centisome position: 97.14

GC content: 68.39

Gene sequence:

>174_bases
ATGACCCATCCCCTTGACGACAGCAACGGCCTCTTTCTCGTGCTGCACAACGCCGCAGGCCAGGCGTCCCTGTGGCCGCA
CTTCCTGGTGGTTCCGGCAGGCTGGACGGCAGTCTTCGGCCCGGAAAGCGCCGAACGCTGCCGCGGCTTCATCGAGGCCC
GCGCTCCCGCCTGA

Upstream 100 bases:

>100_bases
CATCGCCCAGGCCCTGGAGAACCTGCCCGGGCCGGCGGAACGCAGCCGGCTACAGCCGGCCCTTGCGTAGCCATGAAGAA
AACTGCAACGGAGCTTTCCC

Downstream 100 bases:

>100_bases
ACGGCACCCACGGTCCAGCCGATACGGCGGGACGCCGGTCGGAGCACCCAATCAATTCAAACAAACGTTTGATTGAATGT
GGTGTAATCCGCGGCCATGC

Product: MbtH domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MTHPLDDSNGLFLVLHNAAGQASLWPHFLVVPAGWTAVFGPESAERCRGFIEARAPA

Sequences:

>Translated_57_residues
MTHPLDDSNGLFLVLHNAAGQASLWPHFLVVPAGWTAVFGPESAERCRGFIEARAPA
>Mature_56_residues
THPLDDSNGLFLVLHNAAGQASLWPHFLVVPAGWTAVFGPESAERCRGFIEARAPA

Specific function: Could Be Involved In Enterobactin Synthesis. [C]

COG id: COG3251

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6130; Mature: 5999

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHPLDDSNGLFLVLHNAAGQASLWPHFLVVPAGWTAVFGPESAERCRGFIEARAPA
CCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
THPLDDSNGLFLVLHNAAGQASLWPHFLVVPAGWTAVFGPESAERCRGFIEARAPA
CCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA