| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is recX [H]
Identifier: 120613272
GI number: 120613272
Start: 5164561
End: 5165031
Strand: Direct
Name: recX [H]
Synonym: Aave_4641
Alternate gene names: 120613272
Gene position: 5164561-5165031 (Clockwise)
Preceding gene: 120613271
Following gene: 120613278
Centisome position: 96.48
GC content: 73.67
Gene sequence:
>471_bases ATGGGTCTTTCTTCCCCCCTCTCCCTCAAGGGCCGCGCGCTGCGCCTGCTGGCGCAGCGCGAGCACTCGCGCTCCGAACT GGAAGCCAAGCTCGCGCGGCACGTCCAGGAAGGCGACGACCTGCACGCGGTGCTCGACGAACTCCAGGCCAAGGATTTCA TCAACGCCGGCCGCGTGGCCGAATCCGTGGTGCACCGCCGCGCGGCGCGGCTGGGCACGCAGCGCGTGGTGCAGGAACTG CGCGCCAAGGGGCTGGACGATGCGCTGGTGCGCGAGACGGCCGAGCGCCTGCGCGGCAGCGAGGCGGCGCGCGCCCTCGC CGTCTGGCGCCAGCGCTTCGGCACGCCCCCGGAAACGCCCCGGGAGCGGGCACGCCAGATGCGCTTCCTCGCGGCACGCG GCTTTCCGGGCGACGTGGTGCGGCGCGTGGTCGGCGGCCGCATGGAGGCCGAAGACGACCTGCCGGAATGA
Upstream 100 bases:
>100_bases TGGCAGCCGGCGCTGCTGCTGCCGACGAGGCCTGACCCACAGGGCATCCGAAGCGCCGGCCTGCCGTTTTTCGCGGCGGG CCGGCGCGGCTGCGACTCCC
Downstream 100 bases:
>100_bases AGAAGCCACCATGGCGCCCGCCCGGTCGCCGGTAGCAGGTAAAAAAAAAGGGCGCTACCCCAGCAGCCGCTCCGGGTTCG CGTCGATCTTGGCGAGCGCA
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MGLSSPLSLKGRALRLLAQREHSRSELEAKLARHVQEGDDLHAVLDELQAKDFINAGRVAESVVHRRAARLGTQRVVQEL RAKGLDDALVRETAERLRGSEAARALAVWRQRFGTPPETPRERARQMRFLAARGFPGDVVRRVVGGRMEAEDDLPE
Sequences:
>Translated_156_residues MGLSSPLSLKGRALRLLAQREHSRSELEAKLARHVQEGDDLHAVLDELQAKDFINAGRVAESVVHRRAARLGTQRVVQEL RAKGLDDALVRETAERLRGSEAARALAVWRQRFGTPPETPRERARQMRFLAARGFPGDVVRRVVGGRMEAEDDLPE >Mature_155_residues GLSSPLSLKGRALRLLAQREHSRSELEAKLARHVQEGDDLHAVLDELQAKDFINAGRVAESVVHRRAARLGTQRVVQELR AKGLDDALVRETAERLRGSEAARALAVWRQRFGTPPETPRERARQMRFLAARGFPGDVVRRVVGGRMEAEDDLPE
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 17462; Mature: 17331
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSSPLSLKGRALRLLAQREHSRSELEAKLARHVQEGDDLHAVLDELQAKDFINAGRVA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH ESVVHRRAARLGTQRVVQELRAKGLDDALVRETAERLRGSEAARALAVWRQRFGTPPETP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCH RERARQMRFLAARGFPGDVVRRVVGGRMEAEDDLPE HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GLSSPLSLKGRALRLLAQREHSRSELEAKLARHVQEGDDLHAVLDELQAKDFINAGRVA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH ESVVHRRAARLGTQRVVQELRAKGLDDALVRETAERLRGSEAARALAVWRQRFGTPPETP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCH RERARQMRFLAARGFPGDVVRRVVGGRMEAEDDLPE HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]